| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932569
Identifier: 220932569
GI number: 220932569
Start: 1850778
End: 1852301
Strand: Reverse
Name: 220932569
Synonym: Hore_17330
Alternate gene names: NA
Gene position: 1852301-1850778 (Counterclockwise)
Preceding gene: 220932570
Following gene: 220932568
Centisome position: 71.85
GC content: 38.45
Gene sequence:
>1524_bases ATGAAAAAAATAATTTTAATAATTATGGTCCTGTTAATTGTACCGGGATTGCTGGCAGGTTGTTCTAAAAACCCGGTTAC CGGGAAATATGGACCGGCCTGGGATGTTACCTTAAAACTCCCTGTTGTCGGGGGGACAAAAACCCTCGGGGATGTGGTCG GTGCCGGTGATTTTAATACAGTAGGGTATACCATTGATACCTCTACTAACGAATTTCAGTCGTTTTTTATAGATGGGACT GAGGAAAAACCTATAACCAAGGATATAGAGGTTGGTCTGCCTGAATTAACTATAGACAACTCGAGTCCTTTAGTTTCCTT TTCAGATAATATAACTTTGTATCAAACATCTGATACCCGGAGTATAGAATTTCCCCTTGAAATCCCCTTTAAATCTGTAG AATTCGGGGATTCAGGAGGTACCGGAAATAATATAACCTTTACCATCAGTAATGTTTCCGGTACTATTGATAACCTTGAA ATAGAGATTGTTGATAATAGCAGTGGTGGGTTTATTAACAGTGTTTCTTTTATGGGCCTGAATGCAGGGGAAAGTAAAAC AGTGAATCTGGATAGAGAAGTTTTGACCTCTGATGCAGAGTTAAGGCTTGTCTATTACCAGAGTTTCGGCAATGCTACCT TTGATCTGGAAGTGACCGGTTTAAATTCAATAACTGTTTCCAGAATTGAAGGGATGCCTCTAGCTGATAGTAACCTCGGT AGTTTCAGTATGACAGCCCCCCTGGACCTGGGAGAGGCAGCATCTATCGACCCTGTTAATAACACAAATGCTAGATTAAC ATTGACCCTTCAGTTACCTCAAAGCAGTGATATTGATTTGAATTTTGAGACTATATCTTTAGGGAGCCAGAGTTTTAGTA CTGTTGATGGAAATTATGTATACGAGAGTGGTACTTCCATTACTCTCGATGGAGATCTGGTTCTTGATGGTTCTTTTACT TCCTCGTCAGATACTATTAATTATGATGCCGGGGATACCATGGTCATCGGTACGGAAATTGTAGGAAGGGCCCAGCTCTA TAGCTCTTCTGATATTGATATCAGTGTTGATAATGAGGGTTTCATATACTATGAAGCTGAACCGATGCCAGTTGAAATAG ACCAGGAAGATATTGAAGATATTACTGATAATTATCTGAAAGATATATATTTATATACCTCTATATTTAACAATATGGAT GTAAATGTATCTGCAGACATGTATCTCAGCAATGATCCCGGTATTAATCCAGATGATTCCAGTACTTATTCAATTCTATA CCAGGAGAGTAATAAGGTAGCATCATTACTGGAACTTGTTAGTGGAGAAAATAATGACAATAAATTAAGTATGAATGATA TGATCGATAAAATGGAGACAATGCTTACCAATCCACCTGTGTACCTCGGGATTAAATTTAAAATGGGTGGTAATACACAG GCAGATGGGATTTATGAATTTAAATCAACTGATACCCTTGATACTAAAGGTTACCTCGGGGTAACCTTGAAGGTTAACCA GTAG
Upstream 100 bases:
>100_bases GGATTTGTTTGCTGTTATCGAATTATATATAAAAAGGTTATAATTTTTAGGACATTCATCCAGTCTCTTAGAGTTTTTTC GAAGAAAAGGGAGTGATTTC
Downstream 100 bases:
>100_bases AAGGAAGGTGAAATAGATGAGGAAAAAAATTAATATAAGCTTAGTGCTGGCCTTTATACTGTTCCTGACCTGTTTTGCCC CCGGGAGCAGTGCGAAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MKKIILIIMVLLIVPGLLAGCSKNPVTGKYGPAWDVTLKLPVVGGTKTLGDVVGAGDFNTVGYTIDTSTNEFQSFFIDGT EEKPITKDIEVGLPELTIDNSSPLVSFSDNITLYQTSDTRSIEFPLEIPFKSVEFGDSGGTGNNITFTISNVSGTIDNLE IEIVDNSSGGFINSVSFMGLNAGESKTVNLDREVLTSDAELRLVYYQSFGNATFDLEVTGLNSITVSRIEGMPLADSNLG SFSMTAPLDLGEAASIDPVNNTNARLTLTLQLPQSSDIDLNFETISLGSQSFSTVDGNYVYESGTSITLDGDLVLDGSFT SSSDTINYDAGDTMVIGTEIVGRAQLYSSSDIDISVDNEGFIYYEAEPMPVEIDQEDIEDITDNYLKDIYLYTSIFNNMD VNVSADMYLSNDPGINPDDSSTYSILYQESNKVASLLELVSGENNDNKLSMNDMIDKMETMLTNPPVYLGIKFKMGGNTQ ADGIYEFKSTDTLDTKGYLGVTLKVNQ
Sequences:
>Translated_507_residues MKKIILIIMVLLIVPGLLAGCSKNPVTGKYGPAWDVTLKLPVVGGTKTLGDVVGAGDFNTVGYTIDTSTNEFQSFFIDGT EEKPITKDIEVGLPELTIDNSSPLVSFSDNITLYQTSDTRSIEFPLEIPFKSVEFGDSGGTGNNITFTISNVSGTIDNLE IEIVDNSSGGFINSVSFMGLNAGESKTVNLDREVLTSDAELRLVYYQSFGNATFDLEVTGLNSITVSRIEGMPLADSNLG SFSMTAPLDLGEAASIDPVNNTNARLTLTLQLPQSSDIDLNFETISLGSQSFSTVDGNYVYESGTSITLDGDLVLDGSFT SSSDTINYDAGDTMVIGTEIVGRAQLYSSSDIDISVDNEGFIYYEAEPMPVEIDQEDIEDITDNYLKDIYLYTSIFNNMD VNVSADMYLSNDPGINPDDSSTYSILYQESNKVASLLELVSGENNDNKLSMNDMIDKMETMLTNPPVYLGIKFKMGGNTQ ADGIYEFKSTDTLDTKGYLGVTLKVNQ >Mature_507_residues MKKIILIIMVLLIVPGLLAGCSKNPVTGKYGPAWDVTLKLPVVGGTKTLGDVVGAGDFNTVGYTIDTSTNEFQSFFIDGT EEKPITKDIEVGLPELTIDNSSPLVSFSDNITLYQTSDTRSIEFPLEIPFKSVEFGDSGGTGNNITFTISNVSGTIDNLE IEIVDNSSGGFINSVSFMGLNAGESKTVNLDREVLTSDAELRLVYYQSFGNATFDLEVTGLNSITVSRIEGMPLADSNLG SFSMTAPLDLGEAASIDPVNNTNARLTLTLQLPQSSDIDLNFETISLGSQSFSTVDGNYVYESGTSITLDGDLVLDGSFT SSSDTINYDAGDTMVIGTEIVGRAQLYSSSDIDISVDNEGFIYYEAEPMPVEIDQEDIEDITDNYLKDIYLYTSIFNNMD VNVSADMYLSNDPGINPDDSSTYSILYQESNKVASLLELVSGENNDNKLSMNDMIDKMETMLTNPPVYLGIKFKMGGNTQ ADGIYEFKSTDTLDTKGYLGVTLKVNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54883; Mature: 54883
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILIIMVLLIVPGLLAGCSKNPVTGKYGPAWDVTLKLPVVGGTKTLGDVVGAGDFNT CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHCCCCCCE VGYTIDTSTNEFQSFFIDGTEEKPITKDIEVGLPELTIDNSSPLVSFSDNITLYQTSDTR EEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCCEEEECCCCCEEEECCCEEEEECCCCC SIEFPLEIPFKSVEFGDSGGTGNNITFTISNVSGTIDNLEIEIVDNSSGGFINSVSFMGL EEEEEEECCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEE NAGESKTVNLDREVLTSDAELRLVYYQSFGNATFDLEVTGLNSITVSRIEGMPLADSNLG CCCCCEEEECCHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCC SFSMTAPLDLGEAASIDPVNNTNARLTLTLQLPQSSDIDLNFETISLGSQSFSTVDGNYV CEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCEECCCCEE YESGTSITLDGDLVLDGSFTSSSDTINYDAGDTMVIGTEIVGRAQLYSSSDIDISVDNEG EECCCEEEECCCEEEECCCCCCCCEEEECCCCEEEEEEEEECEEEEECCCCCEEEECCCC FIYYEAEPMPVEIDQEDIEDITDNYLKDIYLYTSIFNNMDVNVSADMYLSNDPGINPDDS EEEEECCCCEEECCHHHHHHHHHHHHHHHEEEEHHHCCCCEEEEEEEEECCCCCCCCCCC STYSILYQESNKVASLLELVSGENNDNKLSMNDMIDKMETMLTNPPVYLGIKFKMGGNTQ CEEEEEEECCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCC ADGIYEFKSTDTLDTKGYLGVTLKVNQ CCCEEEECCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKKIILIIMVLLIVPGLLAGCSKNPVTGKYGPAWDVTLKLPVVGGTKTLGDVVGAGDFNT CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHCCCCCCE VGYTIDTSTNEFQSFFIDGTEEKPITKDIEVGLPELTIDNSSPLVSFSDNITLYQTSDTR EEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCCEEEECCCCCEEEECCCEEEEECCCCC SIEFPLEIPFKSVEFGDSGGTGNNITFTISNVSGTIDNLEIEIVDNSSGGFINSVSFMGL EEEEEEECCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEE NAGESKTVNLDREVLTSDAELRLVYYQSFGNATFDLEVTGLNSITVSRIEGMPLADSNLG CCCCCEEEECCHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCC SFSMTAPLDLGEAASIDPVNNTNARLTLTLQLPQSSDIDLNFETISLGSQSFSTVDGNYV CEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCEECCCCEE YESGTSITLDGDLVLDGSFTSSSDTINYDAGDTMVIGTEIVGRAQLYSSSDIDISVDNEG EECCCEEEECCCEEEECCCCCCCCEEEECCCCEEEEEEEEECEEEEECCCCCEEEECCCC FIYYEAEPMPVEIDQEDIEDITDNYLKDIYLYTSIFNNMDVNVSADMYLSNDPGINPDDS EEEEECCCCEEECCHHHHHHHHHHHHHHHEEEEHHHCCCCEEEEEEEEECCCCCCCCCCC STYSILYQESNKVASLLELVSGENNDNKLSMNDMIDKMETMLTNPPVYLGIKFKMGGNTQ CEEEEEEECCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCC ADGIYEFKSTDTLDTKGYLGVTLKVNQ CCCEEEECCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA