Click here to switch to the map view.

The map label for this gene is ylxG [H]

Identifier: 220932519

GI number: 220932519

Start: 1802940

End: 1803368

Strand: Reverse

Name: ylxG [H]

Synonym: Hore_16820

Alternate gene names: 220932519

Gene position: 1803368-1802940 (Counterclockwise)

Preceding gene: 220932520

Following gene: 220932518

Centisome position: 69.95

GC content: 38.46

Gene sequence:

>429_bases
ATGACAATGCTGGCCAGAACCTTTAGTGTTACTCCACAGACCAGCCAGAGTAATGAAAAAGTCACTATGGAAAGAAATGA
TGGCAATAACCTTGATAAAGATGCTTTTTTCAAACTATTAATTACCCAGTTAAGGCACCAGGATCCCTTGAAACCAATGG
AAGATAGAGAGTTTATTGCCCAGATGGCTGAATTTAGTTCCTTAGAACAGATGGCCAATATGAATGAAAACTTAAGTACC
TTTATGCGAATGGAAAGTCTGTCCCAGGGGGCAGCTTTGATTGGTAGAAACGTTGAGTATGTAGATAGTCAAAGTGGAAG
GATTTTAAGTGGTAAAGTGACCAAGGTAGTTTATGAATCGGGAACCCTGTATGCCCATCTCGATAATGATGTAAAAATAC
CTGTAGATACTATTACTTCAATCAGTTAA

Upstream 100 bases:

>100_bases
GAAGAACTGGAAAGGTTAAGAGAATACCTACCACGTTGGTCTTCACTGGGGTATTACCTCCATCGAATGGATTTACTGGC
ATAAAAAAGGGGGGATATTT

Downstream 100 bases:

>100_bases
TGGATTAGAAAGTGGGTGATTAAAAATGGTTGATAACCGTTTGATAGTTAACCACCCCATAAACCCGGCCGGTAAGGTTC
AGAAAAAACCGGCAGCTCCG

Product: flagellar hook capping protein

Products: NA

Alternate protein names: ORF 8 [H]

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTMLARTFSVTPQTSQSNEKVTMERNDGNNLDKDAFFKLLITQLRHQDPLKPMEDREFIAQMAEFSSLEQMANMNENLST
FMRMESLSQGAALIGRNVEYVDSQSGRILSGKVTKVVYESGTLYAHLDNDVKIPVDTITSIS

Sequences:

>Translated_142_residues
MTMLARTFSVTPQTSQSNEKVTMERNDGNNLDKDAFFKLLITQLRHQDPLKPMEDREFIAQMAEFSSLEQMANMNENLST
FMRMESLSQGAALIGRNVEYVDSQSGRILSGKVTKVVYESGTLYAHLDNDVKIPVDTITSIS
>Mature_141_residues
TMLARTFSVTPQTSQSNEKVTMERNDGNNLDKDAFFKLLITQLRHQDPLKPMEDREFIAQMAEFSSLEQMANMNENLSTF
MRMESLSQGAALIGRNVEYVDSQSGRILSGKVTKVVYESGTLYAHLDNDVKIPVDTITSIS

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 16001; Mature: 15870

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLARTFSVTPQTSQSNEKVTMERNDGNNLDKDAFFKLLITQLRHQDPLKPMEDREFIA
CCCCCCEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QMAEFSSLEQMANMNENLSTFMRMESLSQGAALIGRNVEYVDSQSGRILSGKVTKVVYES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCEEECCHHEEEEEEC
GTLYAHLDNDVKIPVDTITSIS
CEEEEEECCCCEECHHHCCCCC
>Mature Secondary Structure 
TMLARTFSVTPQTSQSNEKVTMERNDGNNLDKDAFFKLLITQLRHQDPLKPMEDREFIA
CCCCCEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QMAEFSSLEQMANMNENLSTFMRMESLSQGAALIGRNVEYVDSQSGRILSGKVTKVVYES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCEEECCHHEEEEEEC
GTLYAHLDNDVKIPVDTITSIS
CEEEEEECCCCEECHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]