| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932516
Identifier: 220932516
GI number: 220932516
Start: 1800427
End: 1800630
Strand: Reverse
Name: 220932516
Synonym: Hore_16790
Alternate gene names: NA
Gene position: 1800630-1800427 (Counterclockwise)
Preceding gene: 220932517
Following gene: 220932515
Centisome position: 69.84
GC content: 34.31
Gene sequence:
>204_bases ATGATTAAAGTTAAAAAAATTAATGGTGATGAAATTGTCATTAATGCAGACCTAATGGAAACAGTTCAGGCCACCCCTGA TACAGTAATTACATTGACAACCAATAAAAAAATCCTGGTACTGGATGATGTTGACGATATTATAAAAAAGGTGATAGAGT ATAAGCAGAAGGTTTTTGGTAACCTGAAGGTAGAAGAGGGGTGA
Upstream 100 bases:
>100_bases CGGGGGTAGTTGTTACTATCCCCGGTTACAGGAATAAAATCCGGCCAGGTTTATAGAACGTGAGGGGAGTCTTACAAACT TTAAAAAGGAAGGTTTTAAT
Downstream 100 bases:
>100_bases AATAATGGATTTGTCGACTTTAATTGGTATCCTGACAGGAATAGTCCTCCTTGGTGGCGCTATCATTATGGGAGGAAATG CAGTTATTTTCCTCAGTGTT
Product: flagellar FlbD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MIKVKKINGDEIVINADLMETVQATPDTVITLTTNKKILVLDDVDDIIKKVIEYKQKVFGNLKVEEG
Sequences:
>Translated_67_residues MIKVKKINGDEIVINADLMETVQATPDTVITLTTNKKILVLDDVDDIIKKVIEYKQKVFGNLKVEEG >Mature_67_residues MIKVKKINGDEIVINADLMETVQATPDTVITLTTNKKILVLDDVDDIIKKVIEYKQKVFGNLKVEEG
Specific function: Unknown
COG id: COG1582
COG function: function code N; Uncharacterized protein, possibly involved in motility
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7530; Mature: 7530
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVKKINGDEIVINADLMETVQATPDTVITLTTNKKILVLDDVDDIIKKVIEYKQKVFG CEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHC NLKVEEG CEEEECC >Mature Secondary Structure MIKVKKINGDEIVINADLMETVQATPDTVITLTTNKKILVLDDVDDIIKKVIEYKQKVFG CEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHC NLKVEEG CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA