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The map label for this gene is fliP [H]

Identifier: 220932509

GI number: 220932509

Start: 1795194

End: 1795958

Strand: Reverse

Name: fliP [H]

Synonym: Hore_16720

Alternate gene names: 220932509

Gene position: 1795958-1795194 (Counterclockwise)

Preceding gene: 220932510

Following gene: 220932508

Centisome position: 69.66

GC content: 40.78

Gene sequence:

>765_bases
ATGAATAAAAAGATTGCAGTAGTTTTATTGACAGTTATTATCTTGACAGGTATTTTGAGTTGTAAAGCAGGTGCAGTTGA
ATTTCAATTACCGGATATAAACCTCCAGATCAATGGTTCTAATCCTGCTGAAGGAGAAGACCTGGTCCTGTCACTGAGAA
TTTTATTACTTTTAACTGTATTATCCCTGGCACCTGCCCTTCTGGTTATGGTAACATCATTTACCAGGGTAATCGTTGTT
CTCGGATTGATCAGGCAGGCTCTGGCTACCAGGAGAATGCCGCCAAACCAGGTTCTGATAGGACTGGCTTTATTTCTAAC
AGTATTCATTATGGCCCCAGTCTGGCAGGACATAAACGAACAGGCTCTGCAACCATACTTAAATAATGAAATTACCACCC
AGCAAGCCTATGATCGAGGTATTAAACCGATCAGGGATTTTATGTTTAAGCAAACCAGGGAAAAGGATCTGGCCTTATTT
GTTAATATGACGGGAATAGAAAGGCCTGAAAACCGGGCAGACATTCCAACATATGTCCTGATTCCTGCCTTTGTTATAAG
TGAACTGAAAACGGCCTTTCAGATAGGGTTTTTAATCTATCTGCCTTTTTTAATGATAGACATGGTAGTGGCCAGTATTC
TGATGTCAATGGGGATGTTGATGTTGCCTCCGATTATTATCTCCCTGCCGTTTAAGCTCTTACTGTTTATTCTGGTAGAC
GGCTGGTATCTGGTAATAGAATCCCTGGTTAAGACATTTTACTGA

Upstream 100 bases:

>100_bases
GAGTGGGATGATCAGGATATAGATATTCCTGATTTAAAGCAGGAAGTAAATTTCAAGGGTTATTTCCAGAATTTAATTTC
CCGTAACAGGCGTGATCAGG

Downstream 100 bases:

>100_bases
GGCAGGTGAATGTAGGTGGATAAAGCACTGGTAATAGATATTGGCCGGAATGCTCTGTTTGTTGTTTTAAAGATTATTGC
ACCGGTAATCGGCTTTGGTT

Product: flagellar biosynthetic protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNKKIAVVLLTVIILTGILSCKAGAVEFQLPDINLQINGSNPAEGEDLVLSLRILLLLTVLSLAPALLVMVTSFTRVIVV
LGLIRQALATRRMPPNQVLIGLALFLTVFIMAPVWQDINEQALQPYLNNEITTQQAYDRGIKPIRDFMFKQTREKDLALF
VNMTGIERPENRADIPTYVLIPAFVISELKTAFQIGFLIYLPFLMIDMVVASILMSMGMLMLPPIIISLPFKLLLFILVD
GWYLVIESLVKTFY

Sequences:

>Translated_254_residues
MNKKIAVVLLTVIILTGILSCKAGAVEFQLPDINLQINGSNPAEGEDLVLSLRILLLLTVLSLAPALLVMVTSFTRVIVV
LGLIRQALATRRMPPNQVLIGLALFLTVFIMAPVWQDINEQALQPYLNNEITTQQAYDRGIKPIRDFMFKQTREKDLALF
VNMTGIERPENRADIPTYVLIPAFVISELKTAFQIGFLIYLPFLMIDMVVASILMSMGMLMLPPIIISLPFKLLLFILVD
GWYLVIESLVKTFY
>Mature_254_residues
MNKKIAVVLLTVIILTGILSCKAGAVEFQLPDINLQINGSNPAEGEDLVLSLRILLLLTVLSLAPALLVMVTSFTRVIVV
LGLIRQALATRRMPPNQVLIGLALFLTVFIMAPVWQDINEQALQPYLNNEITTQQAYDRGIKPIRDFMFKQTREKDLALF
VNMTGIERPENRADIPTYVLIPAFVISELKTAFQIGFLIYLPFLMIDMVVASILMSMGMLMLPPIIISLPFKLLLFILVD
GWYLVIESLVKTFY

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=226, Percent_Identity=51.3274336283186, Blast_Score=236, Evalue=8e-64,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 28495; Mature: 28495

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00041 HTH_ARAC_FAMILY_1 ; PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKIAVVLLTVIILTGILSCKAGAVEFQLPDINLQINGSNPAEGEDLVLSLRILLLLTV
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
LSLAPALLVMVTSFTRVIVVLGLIRQALATRRMPPNQVLIGLALFLTVFIMAPVWQDINE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QALQPYLNNEITTQQAYDRGIKPIRDFMFKQTREKDLALFVNMTGIERPENRADIPTYVL
HHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCHHHH
IPAFVISELKTAFQIGFLIYLPFLMIDMVVASILMSMGMLMLPPIIISLPFKLLLFILVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWYLVIESLVKTFY
HHHHHHHHHHHHHC
>Mature Secondary Structure
MNKKIAVVLLTVIILTGILSCKAGAVEFQLPDINLQINGSNPAEGEDLVLSLRILLLLTV
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
LSLAPALLVMVTSFTRVIVVLGLIRQALATRRMPPNQVLIGLALFLTVFIMAPVWQDINE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QALQPYLNNEITTQQAYDRGIKPIRDFMFKQTREKDLALFVNMTGIERPENRADIPTYVL
HHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCHHHH
IPAFVISELKTAFQIGFLIYLPFLMIDMVVASILMSMGMLMLPPIIISLPFKLLLFILVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWYLVIESLVKTFY
HHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]