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The map label for this gene is flhO [H]

Identifier: 220932495

GI number: 220932495

Start: 1782995

End: 1783741

Strand: Reverse

Name: flhO [H]

Synonym: Hore_16580

Alternate gene names: 220932495

Gene position: 1783741-1782995 (Counterclockwise)

Preceding gene: 220932496

Following gene: 220932494

Centisome position: 69.19

GC content: 41.9

Gene sequence:

>747_bases
TTGATTAAAGGAATCTATACTGCTGCTTCCAGTATGGTAACCAACCAGAGGAAGATGAAGCTTGTTGCCAATAATCTGGC
CAATGTTAATACAGCAGGTTATAAAAGGGATGAAGGTATTCAGGTTTCCTTTCCAGAGGTTTTTATCTCACGCCTTGAAA
AAGGACAGGCTACCCCTCTAGGGGAGCTGGGGACCGGTGTTAAAATTGAAGAAGACTATACCGACTTTAGAGAAGGACAG
ATGAACCATACCGGTAATCCCCTGGATGTGGCCATTGATGGCAACGGGTTTTTCGTAGTTGAGACTCCCCGGGGACGTCG
TTATACCAGGAATGGCAATTTTACTGTCAATGAACAGGGTCAGATTGTTACCCAGCAGGGATACCCGGTTCTTGGTGAAA
GGGGTCCTCTCCAGACCATCAGGGGGCGTAATATTAGTATTAATACAGATGGTCAGTTATATCTCGATAATCTTGAAGGG
GATCGCCTTTTAATTGTAGACTTTGAAAATCGTCAGGGATTAAGGAAAATTGGAGAAAACTTATATGTTAATGAAGGAAT
CCGGGAAATCCAGGCCAGTGATTATCAGATTAAACAGGGTTATCTGGAAACATCGAATGTTAATATTGTTAAAGAGATGG
TCAGAATGATAGAGGTAAATCGCGCCTTTGAGGTTAACCAGAAGGTTATTAAAAATGCTGATCAAACTCTGAGTAAGGCT
GTTAATAATGTTGGTAAGCTCGGTTAA

Upstream 100 bases:

>100_bases
TGATAATCAATTATTCTAAATTGTTTATAGAAATATGGAGTTTGTTTATCTAAAAAAAGTTAGATAAAGGTTTAAAAATA
TTTAAAAGGGGGTGAAAAAA

Downstream 100 bases:

>100_bases
ATCTTATTTTTGTTAAGCTTTTTATAAGCTTATTAGAATAAAGATTATTATAATATTATTAATTTCTATAAATTATATAT
AAATATATCCGTTATTAAAT

Product: flagellar basal body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MIKGIYTAASSMVTNQRKMKLVANNLANVNTAGYKRDEGIQVSFPEVFISRLEKGQATPLGELGTGVKIEEDYTDFREGQ
MNHTGNPLDVAIDGNGFFVVETPRGRRYTRNGNFTVNEQGQIVTQQGYPVLGERGPLQTIRGRNISINTDGQLYLDNLEG
DRLLIVDFENRQGLRKIGENLYVNEGIREIQASDYQIKQGYLETSNVNIVKEMVRMIEVNRAFEVNQKVIKNADQTLSKA
VNNVGKLG

Sequences:

>Translated_248_residues
MIKGIYTAASSMVTNQRKMKLVANNLANVNTAGYKRDEGIQVSFPEVFISRLEKGQATPLGELGTGVKIEEDYTDFREGQ
MNHTGNPLDVAIDGNGFFVVETPRGRRYTRNGNFTVNEQGQIVTQQGYPVLGERGPLQTIRGRNISINTDGQLYLDNLEG
DRLLIVDFENRQGLRKIGENLYVNEGIREIQASDYQIKQGYLETSNVNIVKEMVRMIEVNRAFEVNQKVIKNADQTLSKA
VNNVGKLG
>Mature_248_residues
MIKGIYTAASSMVTNQRKMKLVANNLANVNTAGYKRDEGIQVSFPEVFISRLEKGQATPLGELGTGVKIEEDYTDFREGQ
MNHTGNPLDVAIDGNGFFVVETPRGRRYTRNGNFTVNEQGQIVTQQGYPVLGERGPLQTIRGRNISINTDGQLYLDNLEG
DRLLIVDFENRQGLRKIGENLYVNEGIREIQASDYQIKQGYLETSNVNIVKEMVRMIEVNRAFEVNQKVIKNADQTLSKA
VNNVGKLG

Specific function: Not required for motility [H]

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=264, Percent_Identity=35.2272727272727, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1787317, Length=262, Percent_Identity=33.969465648855, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787316, Length=147, Percent_Identity=32.6530612244898, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 27734; Mature: 27734

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKGIYTAASSMVTNQRKMKLVANNLANVNTAGYKRDEGIQVSFPEVFISRLEKGQATPL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCC
GELGTGVKIEEDYTDFREGQMNHTGNPLDVAIDGNGFFVVETPRGRRYTRNGNFTVNEQG
HHCCCCCEEECCHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCEEECCCC
QIVTQQGYPVLGERGPLQTIRGRNISINTDGQLYLDNLEGDRLLIVDFENRQGLRKIGEN
CEEEECCCEECCCCCCCHHHCCCEEEECCCCEEEEECCCCCEEEEEEECCCCHHHHHCCC
LYVNEGIREIQASDYQIKQGYLETSNVNIVKEMVRMIEVNRAFEVNQKVIKNADQTLSKA
CEEHHHHHHHHCCCEEEECCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
VNNVGKLG
HHHHCCCC
>Mature Secondary Structure
MIKGIYTAASSMVTNQRKMKLVANNLANVNTAGYKRDEGIQVSFPEVFISRLEKGQATPL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCC
GELGTGVKIEEDYTDFREGQMNHTGNPLDVAIDGNGFFVVETPRGRRYTRNGNFTVNEQG
HHCCCCCEEECCHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCEEECCCC
QIVTQQGYPVLGERGPLQTIRGRNISINTDGQLYLDNLEGDRLLIVDFENRQGLRKIGEN
CEEEECCCEECCCCCCCHHHCCCEEEECCCCEEEEECCCCCEEEEEEECCCCHHHHHCCC
LYVNEGIREIQASDYQIKQGYLETSNVNIVKEMVRMIEVNRAFEVNQKVIKNADQTLSKA
CEEHHHHHHHHCCCEEEECCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
VNNVGKLG
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836311; 9353933; 9384377 [H]