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The map label for this gene is 220932430

Identifier: 220932430

GI number: 220932430

Start: 1708412

End: 1709524

Strand: Reverse

Name: 220932430

Synonym: Hore_15940

Alternate gene names: NA

Gene position: 1709524-1708412 (Counterclockwise)

Preceding gene: 220932434

Following gene: 220932429

Centisome position: 66.31

GC content: 33.42

Gene sequence:

>1113_bases
ATGTCTTTTTCGAAAAATATAATATTTATTGCTTTGGTTTTAACAATAGTGTTAATTAGTGCTGTTTTAATTTACAGATC
ACAACAACCACTTAAAATAGGGGTAATCTACTATAGCTCCGAGTTTTTTGGTCCAACAGGTGTACCCCGGATAACTGAAT
TATTAAACAACAACAAGAACATTTCAAAAAAGGTTAATATCTATTATGCTGCCTTAACAGAACAAGGGGATAATGTCCAG
GATGTTATTAGCTCCTTTTATAAAAAAGGTATAAATATTATCATCGGGCCTACTACTAGCAGCCAGGCACAGAAAATACT
ACCCTATCTGGAGAGATATAATATGCTGGCAATTGCCCCTGAGGTAACCTCCCCCAGTGTTCTGGGGGTATCGGATAATC
TATACTCAATAGTTCCCAGTGACCGGGTTTTAGCTGATATTATGGCTGAATTAATTTTCCAGGATAAAATAAATAAAGTC
GGGATTTTTTATGATTCCAATAATCCTATTTTTTCAAAAACATTTATTAATTATTTTAAACAGAATTATCAGGGAACAGT
CAGTTTTACAGGTGAAGTTAAGGGGATTGAATTTTATTCTGATTATGAAAGTCTTAAGAGTATAGATGGTATTTTATTAC
TTACCAGCCCCATGCAGAGTGCTATTCTGGTACAGCGCCTGAAAAAAATAAATCCTGATATTAAGTTTTATGGGGGGGAT
TATTCAAATAGTAAGGCTCTGATCGAGTACGGTGGTGAGGCTGCAGAGGGCATCAAAATTTTTTCTTTATACGATAAAGT
ATATTTTGAAACATATAACAATACATTTGCAAAATCTTTAGAGAAGAGAGGTATTTTACCCTGTCAGGATTTCATAAATT
ATTATGATGCTATCTTACTGGCAATAAATTTAGTTAATTCATATGGAAATGATGTTGACAATCTCAAAGAGCATATAAAG
GAATACACATTTGAGGGCATTGGAGGTACAATTTATATTTCTGAAGATGGGCTAGTTTATAGAAAAATTTCAATACTTAC
AGTAAATAATAGCAGATTCGTAACTGACCGGGTAATTAATACAGAGAGAGGTCGTCGGCATGGTAAAAAGTAA

Upstream 100 bases:

>100_bases
TATTCCTAGTCTATTTTTATCTTATAGATAGAGCAGGAACTTTAACATTTATAAAGAATTATGTAAAAGGATGTAATATC
TTAGATGGGAATGATGTTTT

Downstream 100 bases:

>100_bases
GAGTATTAAAAAAGTCGTTAAAAGTAATAGAGTTGTTTTAAAGTTTCTGGTAGTACTTATTATATTTACATATGGGCTTT
ATATTTATAATATTTATGCC

Product: Extracellular ligand-binding receptor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MSFSKNIIFIALVLTIVLISAVLIYRSQQPLKIGVIYYSSEFFGPTGVPRITELLNNNKNISKKVNIYYAALTEQGDNVQ
DVISSFYKKGINIIIGPTTSSQAQKILPYLERYNMLAIAPEVTSPSVLGVSDNLYSIVPSDRVLADIMAELIFQDKINKV
GIFYDSNNPIFSKTFINYFKQNYQGTVSFTGEVKGIEFYSDYESLKSIDGILLLTSPMQSAILVQRLKKINPDIKFYGGD
YSNSKALIEYGGEAAEGIKIFSLYDKVYFETYNNTFAKSLEKRGILPCQDFINYYDAILLAINLVNSYGNDVDNLKEHIK
EYTFEGIGGTIYISEDGLVYRKISILTVNNSRFVTDRVINTERGRRHGKK

Sequences:

>Translated_370_residues
MSFSKNIIFIALVLTIVLISAVLIYRSQQPLKIGVIYYSSEFFGPTGVPRITELLNNNKNISKKVNIYYAALTEQGDNVQ
DVISSFYKKGINIIIGPTTSSQAQKILPYLERYNMLAIAPEVTSPSVLGVSDNLYSIVPSDRVLADIMAELIFQDKINKV
GIFYDSNNPIFSKTFINYFKQNYQGTVSFTGEVKGIEFYSDYESLKSIDGILLLTSPMQSAILVQRLKKINPDIKFYGGD
YSNSKALIEYGGEAAEGIKIFSLYDKVYFETYNNTFAKSLEKRGILPCQDFINYYDAILLAINLVNSYGNDVDNLKEHIK
EYTFEGIGGTIYISEDGLVYRKISILTVNNSRFVTDRVINTERGRRHGKK
>Mature_369_residues
SFSKNIIFIALVLTIVLISAVLIYRSQQPLKIGVIYYSSEFFGPTGVPRITELLNNNKNISKKVNIYYAALTEQGDNVQD
VISSFYKKGINIIIGPTTSSQAQKILPYLERYNMLAIAPEVTSPSVLGVSDNLYSIVPSDRVLADIMAELIFQDKINKVG
IFYDSNNPIFSKTFINYFKQNYQGTVSFTGEVKGIEFYSDYESLKSIDGILLLTSPMQSAILVQRLKKINPDIKFYGGDY
SNSKALIEYGGEAAEGIKIFSLYDKVYFETYNNTFAKSLEKRGILPCQDFINYYDAILLAINLVNSYGNDVDNLKEHIKE
YTFEGIGGTIYISEDGLVYRKISILTVNNSRFVTDRVINTERGRRHGKK

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41752; Mature: 41621

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSKNIIFIALVLTIVLISAVLIYRSQQPLKIGVIYYSSEFFGPTGVPRITELLNNNKN
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCC
ISKKVNIYYAALTEQGDNVQDVISSFYKKGINIIIGPTTSSQAQKILPYLERYNMLAIAP
CCEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEC
EVTSPSVLGVSDNLYSIVPSDRVLADIMAELIFQDKINKVGIFYDSNNPIFSKTFINYFK
CCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH
QNYQGTVSFTGEVKGIEFYSDYESLKSIDGILLLTSPMQSAILVQRLKKINPDIKFYGGD
HCCCEEEEEEEEECCEEEHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEECCC
YSNSKALIEYGGEAAEGIKIFSLYDKVYFETYNNTFAKSLEKRGILPCQDFINYYDAILL
CCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHH
AINLVNSYGNDVDNLKEHIKEYTFEGIGGTIYISEDGLVYRKISILTVNNSRFVTDRVIN
HHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEECCCEEEEHHHHC
TERGRRHGKK
CHHHHHCCCC
>Mature Secondary Structure 
SFSKNIIFIALVLTIVLISAVLIYRSQQPLKIGVIYYSSEFFGPTGVPRITELLNNNKN
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCC
ISKKVNIYYAALTEQGDNVQDVISSFYKKGINIIIGPTTSSQAQKILPYLERYNMLAIAP
CCEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEC
EVTSPSVLGVSDNLYSIVPSDRVLADIMAELIFQDKINKVGIFYDSNNPIFSKTFINYFK
CCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH
QNYQGTVSFTGEVKGIEFYSDYESLKSIDGILLLTSPMQSAILVQRLKKINPDIKFYGGD
HCCCEEEEEEEEECCEEEHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEECCC
YSNSKALIEYGGEAAEGIKIFSLYDKVYFETYNNTFAKSLEKRGILPCQDFINYYDAILL
CCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHH
AINLVNSYGNDVDNLKEHIKEYTFEGIGGTIYISEDGLVYRKISILTVNNSRFVTDRVIN
HHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEECCCEEEEHHHHC
TERGRRHGKK
CHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA