| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932389
Identifier: 220932389
GI number: 220932389
Start: 1664030
End: 1664479
Strand: Reverse
Name: 220932389
Synonym: Hore_15530
Alternate gene names: NA
Gene position: 1664479-1664030 (Counterclockwise)
Preceding gene: 220932390
Following gene: 220932387
Centisome position: 64.56
GC content: 38.89
Gene sequence:
>450_bases ATGAGGATAGACAGTAAAGACCTTTCTTCCCCGGTCAGAAGGGGTGAAAGGGTAAAAAAGGCTCCGGTGAAAAGTATTAA AGAAGCCGGTTTTAAAGATAAACTGGCCGAATTGAGCCAGAATGAAATAAGGGAAAGGCTCGATAAACTCCTCAGTATTG TTGATGAACAGGGCCAGAGATTAAAGGAATCCCTTGATAAAAATAGCCTTCTTGAATATAAAAGAAGGGTCAAACAGTTT TTGAGGGTTGTCCAGAAGGAGTTTGTTAAAGCCCATCAGTCCTTTTCCTGGGATAGTAAAGGGAATTTAAAAACATTAAC TATTATCAAAAAGGTTGATGAAAACCTGGAAGTCCTCCATGAGATGTTCATGGAGGAGCAGGCCGATGTCTTAAAAATAG TTCAAAAAATAGATGAGATCAGGGGTCTTTTACTCGACCTCTATATTTAA
Upstream 100 bases:
>100_bases TGATTTTCATAATTGAATTTTAAATTATAAAATTTGTTTATTATTAAAGGAAATTATTATTTAATATTGAAATATAAAGA TAGGATAAGGAGGGGACAAG
Downstream 100 bases:
>100_bases GGTCTATTATTTAACGTCTATCCTGATTAACCTGGATAATAAACGGTGTAATCAGGGGGGCCCTCTTTAATTTATCATAT ATCAGGTTATTGACTTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRIDSKDLSSPVRRGERVKKAPVKSIKEAGFKDKLAELSQNEIRERLDKLLSIVDEQGQRLKESLDKNSLLEYKRRVKQF LRVVQKEFVKAHQSFSWDSKGNLKTLTIIKKVDENLEVLHEMFMEEQADVLKIVQKIDEIRGLLLDLYI
Sequences:
>Translated_149_residues MRIDSKDLSSPVRRGERVKKAPVKSIKEAGFKDKLAELSQNEIRERLDKLLSIVDEQGQRLKESLDKNSLLEYKRRVKQF LRVVQKEFVKAHQSFSWDSKGNLKTLTIIKKVDENLEVLHEMFMEEQADVLKIVQKIDEIRGLLLDLYI >Mature_149_residues MRIDSKDLSSPVRRGERVKKAPVKSIKEAGFKDKLAELSQNEIRERLDKLLSIVDEQGQRLKESLDKNSLLEYKRRVKQF LRVVQKEFVKAHQSFSWDSKGNLKTLTIIKKVDENLEVLHEMFMEEQADVLKIVQKIDEIRGLLLDLYI
Specific function: Unknown
COG id: COG1728
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17480; Mature: 17480
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDSKDLSSPVRRGERVKKAPVKSIKEAGFKDKLAELSQNEIRERLDKLLSIVDEQGQR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKESLDKNSLLEYKRRVKQFLRVVQKEFVKAHQSFSWDSKGNLKTLTIIKKVDENLEVLH HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH EMFMEEQADVLKIVQKIDEIRGLLLDLYI HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIDSKDLSSPVRRGERVKKAPVKSIKEAGFKDKLAELSQNEIRERLDKLLSIVDEQGQR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKESLDKNSLLEYKRRVKQFLRVVQKEFVKAHQSFSWDSKGNLKTLTIIKKVDENLEVLH HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH EMFMEEQADVLKIVQKIDEIRGLLLDLYI HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA