Click here to switch to the map view.

The map label for this gene is mamA [H]

Identifier: 220932382

GI number: 220932382

Start: 1655528

End: 1655968

Strand: Reverse

Name: mamA [H]

Synonym: Hore_15460

Alternate gene names: 220932382

Gene position: 1655968-1655528 (Counterclockwise)

Preceding gene: 220932383

Following gene: 220932381

Centisome position: 64.23

GC content: 48.07

Gene sequence:

>441_bases
ATGGCGGGCAAAAATGATGACAACAAACCTACTGTAGTTCTGGGAGTTATCGGAGCTGATGTTCATGCGGTCGGTAATCA
GATTCTGGAGCATGCCTTGAGGGAAGCCGGTTTTGATGTAGCCAATATCGGGGTTATGGTTTCTCAGAAGGAATTTGTAT
CTGCGGCCATTGAAACCGGGGCCGAGGCTATCTGGGTTTCATCTCTTTATGGCCATGGTGAGATGGACTGTCGGGGCCTC
AGGGAGAAATGTATTGAGGCCGGAATCGGGGATATTTTAATTTATGTTGGCGGTAACCTGGTAGTTGGAAAACAGGACTG
GGAAAAGGTGAGAAAGCTGTTCCTGGATATGGGTTTTGACAGGGTCTATCCTCCAGGTACCCTGCCTGAAGAAGCCATTG
CTGATTTAGAAGAAGACCTTAAATCCAGGGGTGTCTTGTGA

Upstream 100 bases:

>100_bases
CTCTGGCCAGGCAGGCATTTTTATTCAGTTATTTATAATTGTAAATTATTAATATGTAAATTATTAATATGTAAATTATT
AATAAATAAGGGGGAGTAAA

Downstream 100 bases:

>100_bases
GATGGAAACAGCCTTATTAATTGATATCGGGAGCACTTATACTAAAGTTACCTTAATAGATTTAGAAAAAATTGAAATCA
GGGGTCAAAGCCAGGCCCAT

Product: methylaspartate mutase subunit S

Products: NA

Alternate protein names: Glutamate mutase subunit sigma [H]

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAGKNDDNKPTVVLGVIGADVHAVGNQILEHALREAGFDVANIGVMVSQKEFVSAAIETGAEAIWVSSLYGHGEMDCRGL
REKCIEAGIGDILIYVGGNLVVGKQDWEKVRKLFLDMGFDRVYPPGTLPEEAIADLEEDLKSRGVL

Sequences:

>Translated_146_residues
MAGKNDDNKPTVVLGVIGADVHAVGNQILEHALREAGFDVANIGVMVSQKEFVSAAIETGAEAIWVSSLYGHGEMDCRGL
REKCIEAGIGDILIYVGGNLVVGKQDWEKVRKLFLDMGFDRVYPPGTLPEEAIADLEEDLKSRGVL
>Mature_145_residues
AGKNDDNKPTVVLGVIGADVHAVGNQILEHALREAGFDVANIGVMVSQKEFVSAAIETGAEAIWVSSLYGHGEMDCRGLR
EKCIEAGIGDILIYVGGNLVVGKQDWEKVRKLFLDMGFDRVYPPGTLPEEAIADLEEDLKSRGVL

Specific function: Unknown

COG id: COG2185

COG function: function code I; Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006394 [H]

Pfam domain/function: PF02310 B12-binding [H]

EC number: =5.4.99.1 [H]

Molecular weight: Translated: 15740; Mature: 15609

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKNDDNKPTVVLGVIGADVHAVGNQILEHALREAGFDVANIGVMVSQKEFVSAAIETG
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHEEECHHHHHHHHHHCC
AEAIWVSSLYGHGEMDCRGLREKCIEAGIGDILIYVGGNLVVGKQDWEKVRKLFLDMGFD
CHHEEHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHCCCC
RVYPPGTLPEEAIADLEEDLKSRGVL
CCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AGKNDDNKPTVVLGVIGADVHAVGNQILEHALREAGFDVANIGVMVSQKEFVSAAIETG
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHEEECHHHHHHHHHHCC
AEAIWVSSLYGHGEMDCRGLREKCIEAGIGDILIYVGGNLVVGKQDWEKVRKLFLDMGFD
CHHEEHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHCCCC
RVYPPGTLPEEAIADLEEDLKSRGVL
CCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA