| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932379
Identifier: 220932379
GI number: 220932379
Start: 1651247
End: 1652491
Strand: Reverse
Name: 220932379
Synonym: Hore_15430
Alternate gene names: NA
Gene position: 1652491-1651247 (Counterclockwise)
Preceding gene: 220932380
Following gene: 220932378
Centisome position: 64.1
GC content: 48.92
Gene sequence:
>1245_bases TTGGCAACAATAAAAAAAGTTCTGGCTTCACCGGGCCTTACCGGCTTTTATTTCGATGATCAGGCTGCGATTAAACATAA TGCCAGGGAGGATGGCTTCACTTATAAAGGAGAGGTGGAGACCCCGGGTTTTACATCTATCAGGCAGGCCGGTGAATCGA TATCGGTAATTCTTATACTCGATGATGGTCAGATGGCCTATGGAGACTGTGCTGCAGTCCAGTATTCGGGGGCCGGGGGG CGGGATCCTCTCTTTCTGGCCAGGGACTTTATTCCTGTTATTAACAGGGAAATTGCCCCCCGGCTGGAGGGGGAAGACCT CGATAGCTTTAAGAGACTGGCGGAAAAGGTAGATATGCTGACCCTCAATGGTAAGAGGCTTCATACCGCTCTTAGATATG GTATAACCCAGGCCCTCCTGGATGCTGTGGCTAAAGCGGAAAAATTGACACGGACTGAGGTGGTGGCCAACGAATACGGC CTTGATATAATACCGGAACCTGTTCCCATTTTTGCCCAGACAGGTGATGAGCGTTACGCCAATGCCGATAAGATTATTAT AAAACATGTTGATGTTCTCCCCCATGGGCTAATAAATAATGTCAGGACAAAACTGGGGGAAAAGGGTGAAAAATTACTGG ATTACGTCCGGTGGCTTAAAAAGAGGGTTCTCGAAATCGGTGGTGAGGACTATAAGCCATCCCTTCACCTTGATGTTTAT GGTACCATTGGTCTGGCATTCAATGATGACCCTGACCTTATGGCTGAATACCTGGGGAGACTTGAAGAAGCAGCCCACCC CTTTAAAATAAGGATTGAGGGGCCGATGGATGCCGGGAGTAAAGAGGGCCAGATAGAGCAGCTGGTAATGTTAAAAGAAC GCCTTCAGGCTTCAGGTATCGGGGTCGACCTTGTTGCCGACGAATGGTGTAATACCCTGGAGGATATCAAGGAGTTTGTT GATGCCAGGGCGGCCGATATGGTCCAGATTAAAACCCCTGACCTCGGGGGGATAAATAATACCATTGAGGCGGTCCTGTA CTGTAAAGAGAAGGGGATTGGCGCTTATCAGGGTGGAACCTGTAATGAGACTGATCGTTCAGCCCAGATCTCCACAGATA TCGCACTTGCCACCAGACCGGATCAGATACTGGCCAAACCCGGGATGGGGGTTGACGAAGGTTTAATGATCGTTTACAAC GAAATGCAGCGGGTTTTGACAATCTTAAAGGCCAGAGAGGCATAA
Upstream 100 bases:
>100_bases CATAGAACTATTTGAAAAGGAGCAGAAGGATGAAAAAACACGGGGAACACATATGGTATCTGGTTAACGGGTATAACAAA AAGATAAAGGAGTGATCCTG
Downstream 100 bases:
>100_bases TGAAAAGGCCGGGGTACAGAAATGTAATAGTGTAAGTGGGGTAGGGAAAAATAATGGTTTAAGCATTGAAGGAAACGGTA GAAACTTTTTGTTATTAGCT
Product: Methylaspartate ammonia-lyase
Products: NA
Alternate protein names: Beta-methylaspartase [H]
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MATIKKVLASPGLTGFYFDDQAAIKHNAREDGFTYKGEVETPGFTSIRQAGESISVILILDDGQMAYGDCAAVQYSGAGG RDPLFLARDFIPVINREIAPRLEGEDLDSFKRLAEKVDMLTLNGKRLHTALRYGITQALLDAVAKAEKLTRTEVVANEYG LDIIPEPVPIFAQTGDERYANADKIIIKHVDVLPHGLINNVRTKLGEKGEKLLDYVRWLKKRVLEIGGEDYKPSLHLDVY GTIGLAFNDDPDLMAEYLGRLEEAAHPFKIRIEGPMDAGSKEGQIEQLVMLKERLQASGIGVDLVADEWCNTLEDIKEFV DARAADMVQIKTPDLGGINNTIEAVLYCKEKGIGAYQGGTCNETDRSAQISTDIALATRPDQILAKPGMGVDEGLMIVYN EMQRVLTILKAREA
Sequences:
>Translated_414_residues MATIKKVLASPGLTGFYFDDQAAIKHNAREDGFTYKGEVETPGFTSIRQAGESISVILILDDGQMAYGDCAAVQYSGAGG RDPLFLARDFIPVINREIAPRLEGEDLDSFKRLAEKVDMLTLNGKRLHTALRYGITQALLDAVAKAEKLTRTEVVANEYG LDIIPEPVPIFAQTGDERYANADKIIIKHVDVLPHGLINNVRTKLGEKGEKLLDYVRWLKKRVLEIGGEDYKPSLHLDVY GTIGLAFNDDPDLMAEYLGRLEEAAHPFKIRIEGPMDAGSKEGQIEQLVMLKERLQASGIGVDLVADEWCNTLEDIKEFV DARAADMVQIKTPDLGGINNTIEAVLYCKEKGIGAYQGGTCNETDRSAQISTDIALATRPDQILAKPGMGVDEGLMIVYN EMQRVLTILKAREA >Mature_413_residues ATIKKVLASPGLTGFYFDDQAAIKHNAREDGFTYKGEVETPGFTSIRQAGESISVILILDDGQMAYGDCAAVQYSGAGGR DPLFLARDFIPVINREIAPRLEGEDLDSFKRLAEKVDMLTLNGKRLHTALRYGITQALLDAVAKAEKLTRTEVVANEYGL DIIPEPVPIFAQTGDERYANADKIIIKHVDVLPHGLINNVRTKLGEKGEKLLDYVRWLKKRVLEIGGEDYKPSLHLDVYG TIGLAFNDDPDLMAEYLGRLEEAAHPFKIRIEGPMDAGSKEGQIEQLVMLKERLQASGIGVDLVADEWCNTLEDIKEFVD ARAADMVQIKTPDLGGINNTIEAVLYCKEKGIGAYQGGTCNETDRSAQISTDIALATRPDQILAKPGMGVDEGLMIVYNE MQRVLTILKAREA
Specific function: Unknown
COG id: COG3799
COG function: function code E; Methylaspartate ammonia-lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006395 - InterPro: IPR022662 - InterPro: IPR022665 [H]
Pfam domain/function: PF07476 MAAL_C; PF05034 MAAL_N [H]
EC number: =4.3.1.2 [H]
Molecular weight: Translated: 45558; Mature: 45426
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIKKVLASPGLTGFYFDDQAAIKHNAREDGFTYKGEVETPGFTSIRQAGESISVILIL CCHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCEECCCCCCCCHHHHHHCCCCEEEEEEE DDGQMAYGDCAAVQYSGAGGRDPLFLARDFIPVINREIAPRLEGEDLDSFKRLAEKVDML CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEE TLNGKRLHTALRYGITQALLDAVAKAEKLTRTEVVANEYGLDIIPEPVPIFAQTGDERYA EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHC NADKIIIKHVDVLPHGLINNVRTKLGEKGEKLLDYVRWLKKRVLEIGGEDYKPSLHLDVY CCCCEEEEHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE GTIGLAFNDDPDLMAEYLGRLEEAAHPFKIRIEGPMDAGSKEGQIEQLVMLKERLQASGI EEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC GVDLVADEWCNTLEDIKEFVDARAADMVQIKTPDLGGINNTIEAVLYCKEKGIGAYQGGT CEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHEEECCCCCCCCCCCC CNETDRSAQISTDIALATRPDQILAKPGMGVDEGLMIVYNEMQRVLTILKAREA CCCCCCCCEEECCEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATIKKVLASPGLTGFYFDDQAAIKHNAREDGFTYKGEVETPGFTSIRQAGESISVILIL CHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCEECCCCCCCCHHHHHHCCCCEEEEEEE DDGQMAYGDCAAVQYSGAGGRDPLFLARDFIPVINREIAPRLEGEDLDSFKRLAEKVDML CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEE TLNGKRLHTALRYGITQALLDAVAKAEKLTRTEVVANEYGLDIIPEPVPIFAQTGDERYA EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHC NADKIIIKHVDVLPHGLINNVRTKLGEKGEKLLDYVRWLKKRVLEIGGEDYKPSLHLDVY CCCCEEEEHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE GTIGLAFNDDPDLMAEYLGRLEEAAHPFKIRIEGPMDAGSKEGQIEQLVMLKERLQASGI EEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC GVDLVADEWCNTLEDIKEFVDARAADMVQIKTPDLGGINNTIEAVLYCKEKGIGAYQGGT CEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHEEECCCCCCCCCCCC CNETDRSAQISTDIALATRPDQILAKPGMGVDEGLMIVYNEMQRVLTILKAREA CCCCCCCCEEECCEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1420191; 8454064; 8428631; 1397267 [H]