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The map label for this gene is 220932360

Identifier: 220932360

GI number: 220932360

Start: 1629305

End: 1630213

Strand: Reverse

Name: 220932360

Synonym: Hore_15240

Alternate gene names: NA

Gene position: 1630213-1629305 (Counterclockwise)

Preceding gene: 220932361

Following gene: 220932359

Centisome position: 63.23

GC content: 31.13

Gene sequence:

>909_bases
ATGACTGAAAAACAAAAAGTTCCTAATAATTCAGAGATATTATTTCTTTATGATGCTAAAAGGTCTAATCCAAATGGGGA
TATGGATAATGAAAACAAACCAAGGATGGATTGGGACACAGGAACAAATTTAGTTAGCGATGTAAGATTAAAAAGGTATA
TCAGGGATTATTTGCAGAAAGTTAAGGGAAAAAATTTATTTGTGAGTGAAGAGGCGGAAAAAGCTGAAAACCGGGTTCAT
CAAATATTAGGAAGGAAACCATCTTCAAATAAACCAGTTACAGATGAGGAACTTACTAAAATTGCTGAAGAATGTTGTGA
TGTAATATATTTTGGAGCAGTTCTTGGTACATCTGGTGGTAATACTCATTTAACAGGACCTGTACAGTTTAATTGGGGAT
ACTCCCTAAATAAGGTAGAATTACAGGAGTCAAAGACTATCACTTCTAGTTTTAGTTCTGGGGAAGGTGTTGGTAAAGAC
TATAGAGTAAAATATTCTTTTATAGCTTTTAGCGGTGGTATCAATGGTCTTGCTGCCAAAGATACAAAACTTACAGAAAA
CGATGTTAAATTGCTTGATGAAGCTATAATAAAATCAATACCATTGAATAGAACCCGTTCTAAAATTGGACAAACTCCAA
GGCTATATCTGAGAGTTGAAATGAATGATAATGAAACAGCATTAAACGATTTGAGAGAATACATTTCTCTTGATTATAAT
GTCCGTGAAGAAGATGTTAGAGATATTAATAATATTGAATTAGTTATAGATGAACTGCTGGAATATTTATCAACCATTAA
AAGCAAAATTAAAAAAATTAATTACTGGAAAGATAATAAACTAACAGTTAAAGATAATGGCTTTGAAAAGTTATTAAATA
CGTTCCCTGTAAATGAATTAAATTATTAG

Upstream 100 bases:

>100_bases
GATGAAGTAGTATTTTATATATTGTCTGGTATTTCTTTTGGTAGGTACTTAGGTCATAAATACTATAAGACTAAGAATAA
TAAGGGGGATGACAAATAAA

Downstream 100 bases:

>100_bases
GGTAGGAGTTGTTATTATGGACATTAACCAAGTCCTGGTTTTTAAAATAAAGGGTAAAATTGCACATTTCAAAAAATACT
ACAGCAATAAAAGTTCTTTA

Product: CRISPR-associated protein, Csh2 family

Products: NA

Alternate protein names: CRISPR-Associated Csh2 Family Protein; CRISPR-Associated Protein Csd2 Family; CRISPR-Associated Csd2 Family Protein; CRISPR-Associated Protein; Csd2 Family CRISPR-Associated Protein; Crispr-Associated Protein Csh2 Family; Crispr-Protein; Csh2 Family CRISPR-Associated Protein; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; Crispr-Associated Protein; Cas2 Family CRISPR-Associated Protein; Csh Crispr-Associated Protein Csh2 Family; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTEKQKVPNNSEILFLYDAKRSNPNGDMDNENKPRMDWDTGTNLVSDVRLKRYIRDYLQKVKGKNLFVSEEAEKAENRVH
QILGRKPSSNKPVTDEELTKIAEECCDVIYFGAVLGTSGGNTHLTGPVQFNWGYSLNKVELQESKTITSSFSSGEGVGKD
YRVKYSFIAFSGGINGLAAKDTKLTENDVKLLDEAIIKSIPLNRTRSKIGQTPRLYLRVEMNDNETALNDLREYISLDYN
VREEDVRDINNIELVIDELLEYLSTIKSKIKKINYWKDNKLTVKDNGFEKLLNTFPVNELNY

Sequences:

>Translated_302_residues
MTEKQKVPNNSEILFLYDAKRSNPNGDMDNENKPRMDWDTGTNLVSDVRLKRYIRDYLQKVKGKNLFVSEEAEKAENRVH
QILGRKPSSNKPVTDEELTKIAEECCDVIYFGAVLGTSGGNTHLTGPVQFNWGYSLNKVELQESKTITSSFSSGEGVGKD
YRVKYSFIAFSGGINGLAAKDTKLTENDVKLLDEAIIKSIPLNRTRSKIGQTPRLYLRVEMNDNETALNDLREYISLDYN
VREEDVRDINNIELVIDELLEYLSTIKSKIKKINYWKDNKLTVKDNGFEKLLNTFPVNELNY
>Mature_301_residues
TEKQKVPNNSEILFLYDAKRSNPNGDMDNENKPRMDWDTGTNLVSDVRLKRYIRDYLQKVKGKNLFVSEEAEKAENRVHQ
ILGRKPSSNKPVTDEELTKIAEECCDVIYFGAVLGTSGGNTHLTGPVQFNWGYSLNKVELQESKTITSSFSSGEGVGKDY
RVKYSFIAFSGGINGLAAKDTKLTENDVKLLDEAIIKSIPLNRTRSKIGQTPRLYLRVEMNDNETALNDLREYISLDYNV
REEDVRDINNIELVIDELLEYLSTIKSKIKKINYWKDNKLTVKDNGFEKLLNTFPVNELNY

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34526; Mature: 34395

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKQKVPNNSEILFLYDAKRSNPNGDMDNENKPRMDWDTGTNLVSDVRLKRYIRDYLQK
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VKGKNLFVSEEAEKAENRVHQILGRKPSSNKPVTDEELTKIAEECCDVIYFGAVLGTSGG
HCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NTHLTGPVQFNWGYSLNKVELQESKTITSSFSSGEGVGKDYRVKYSFIAFSGGINGLAAK
CCEEECCEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCC
DTKLTENDVKLLDEAIIKSIPLNRTRSKIGQTPRLYLRVEMNDNETALNDLREYISLDYN
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCC
VREEDVRDINNIELVIDELLEYLSTIKSKIKKINYWKDNKLTVKDNGFEKLLNTFPVNEL
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCHHC
NY
CC
>Mature Secondary Structure 
TEKQKVPNNSEILFLYDAKRSNPNGDMDNENKPRMDWDTGTNLVSDVRLKRYIRDYLQK
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VKGKNLFVSEEAEKAENRVHQILGRKPSSNKPVTDEELTKIAEECCDVIYFGAVLGTSGG
HCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NTHLTGPVQFNWGYSLNKVELQESKTITSSFSSGEGVGKDYRVKYSFIAFSGGINGLAAK
CCEEECCEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCC
DTKLTENDVKLLDEAIIKSIPLNRTRSKIGQTPRLYLRVEMNDNETALNDLREYISLDYN
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCC
VREEDVRDINNIELVIDELLEYLSTIKSKIKKINYWKDNKLTVKDNGFEKLLNTFPVNEL
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCHHC
NY
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA