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The map label for this gene is 220932355

Identifier: 220932355

GI number: 220932355

Start: 1624188

End: 1624784

Strand: Reverse

Name: 220932355

Synonym: Hore_15190

Alternate gene names: NA

Gene position: 1624784-1624188 (Counterclockwise)

Preceding gene: 220932356

Following gene: 220932354

Centisome position: 63.02

GC content: 29.15

Gene sequence:

>597_bases
ATGGTAAAAGTCAGTAACATTAGTTTAACTCCTTCAGAGGTTATGGAGTATTTATACTGCCCCCGGTTTATATATTATAT
GTCATATTTAAAAATTCCACAACATGAAAAAAATCGGTTTAAGGTTATGATGGGTCGTGATATGCACAAAAGAAAACTTA
AGATTAATAAAAAATATCTTCGAAAAAAGATAGGGGTTAAAAAGAAAATATTGGATAAAAAGATGTACTCAAAAAAACAT
AATATACATGGGATAGTTGATGAGATTTTATTCCTGGAAGATGGTACAGCAGCACCGTTGGATTATAAATACGCAAAATA
TAAAAAGAGGACTTTTCTCACACATAAATATCAGGCCGCCATGTATGGGTTAATGATTGCTGATATTTATAATATTGAAG
TTAACCGGGCCTATATTGTATACATCAGGAGTAAGAACCTATTGAAAGAAATTAAACTGGATACAAAAATATACAGTAAT
GTTGGGAAAATAATGAAAGAAATAATATCAATTATCCAGAAAGGGTATTATCCAGATAGAACTAAATACAAAAGAAGGTG
TTTTGACTGTACTTATAGAAATATTTGTATAAAATAA

Upstream 100 bases:

>100_bases
GTGTCAGGAAGATTTTAAAAAAGTAGAAATTATTGGACAGGCTTTTGATAAAGCCATGGTTAATGATAAATTGAATAGTT
TTTTTATGTAGGTGAGTGGG

Downstream 100 bases:

>100_bases
ACCCAACAGGAGTTGATTCGAGTTGGAGTTAAAGGTTGTTCAATTAACATATGATCTGGAGGAAGATCTGCCCTTAAGTT
ATGGTCATAAACTAAGGGGT

Product: CRISPR-associated protein Cas4

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MVKVSNISLTPSEVMEYLYCPRFIYYMSYLKIPQHEKNRFKVMMGRDMHKRKLKINKKYLRKKIGVKKKILDKKMYSKKH
NIHGIVDEILFLEDGTAAPLDYKYAKYKKRTFLTHKYQAAMYGLMIADIYNIEVNRAYIVYIRSKNLLKEIKLDTKIYSN
VGKIMKEIISIIQKGYYPDRTKYKRRCFDCTYRNICIK

Sequences:

>Translated_198_residues
MVKVSNISLTPSEVMEYLYCPRFIYYMSYLKIPQHEKNRFKVMMGRDMHKRKLKINKKYLRKKIGVKKKILDKKMYSKKH
NIHGIVDEILFLEDGTAAPLDYKYAKYKKRTFLTHKYQAAMYGLMIADIYNIEVNRAYIVYIRSKNLLKEIKLDTKIYSN
VGKIMKEIISIIQKGYYPDRTKYKRRCFDCTYRNICIK
>Mature_198_residues
MVKVSNISLTPSEVMEYLYCPRFIYYMSYLKIPQHEKNRFKVMMGRDMHKRKLKINKKYLRKKIGVKKKILDKKMYSKKH
NIHGIVDEILFLEDGTAAPLDYKYAKYKKRTFLTHKYQAAMYGLMIADIYNIEVNRAYIVYIRSKNLLKEIKLDTKIYSN
VGKIMKEIISIIQKGYYPDRTKYKRRCFDCTYRNICIK

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23878; Mature: 23878

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVSNISLTPSEVMEYLYCPRFIYYMSYLKIPQHEKNRFKVMMGRDMHKRKLKINKKYL
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
RKKIGVKKKILDKKMYSKKHNIHGIVDEILFLEDGTAAPLDYKYAKYKKRTFLTHKYQAA
HHHHCHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
MYGLMIADIYNIEVNRAYIVYIRSKNLLKEIKLDTKIYSNVGKIMKEIISIIQKGYYPDR
HHHHHHHHHEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TKYKRRCFDCTYRNICIK
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVKVSNISLTPSEVMEYLYCPRFIYYMSYLKIPQHEKNRFKVMMGRDMHKRKLKINKKYL
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
RKKIGVKKKILDKKMYSKKHNIHGIVDEILFLEDGTAAPLDYKYAKYKKRTFLTHKYQAA
HHHHCHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
MYGLMIADIYNIEVNRAYIVYIRSKNLLKEIKLDTKIYSNVGKIMKEIISIIQKGYYPDR
HHHHHHHHHEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TKYKRRCFDCTYRNICIK
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA