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The map label for this gene is yitS [H]

Identifier: 220932244

GI number: 220932244

Start: 1496959

End: 1497831

Strand: Reverse

Name: yitS [H]

Synonym: Hore_14080

Alternate gene names: 220932244

Gene position: 1497831-1496959 (Counterclockwise)

Preceding gene: 220932245

Following gene: 220932243

Centisome position: 58.1

GC content: 40.09

Gene sequence:

>873_bases
ATGGAAAAGGTAAAGATATTTACAGATAGCTGTTCTGATCTCTCGCCTGATGTTATATCCAGGTATGATATTAAGATGCT
CTCTACCCCGGTTTACTTTGGGGAAGAGCGGTACTATGACCGGGATAATTTAACCCCGGGAGAGTTTTATAATAAGCTGG
AGAATTATTCAGGGGTTCCTAAAACCTCTCAGATAGGTCCTACAGTATTTGAATCAGAGTTTAAAAAAGCCCTGGAAGAG
GGTTATAAAGTATTATCTTTAAATTTTTCATCAAAGTTAAGTGGTATTTTTGAGTCAGCTGCCCTGGCTAAGAAAAATAT
TGGATCTGATGATATTCATGTTATTGATACCAGGTGTGCCTCTGTTGGTTTTGGATTATCTGTAATCTATGCAGCCCGCC
TTCTTGAAGAAGGCCGGGATTTAAACGAGGTAATTGAAAGTACCCTGGATTACTGTGCCCATCAGGAGCATATTTTTGCA
GTAGGTTCCCTGGAGATGTTGAAAAGGGGTGGTCGGATTAAATCTACCACTGCATTTATTGGTAATATTTTGAAAATTAA
GCCTATTTTACACTTCAGGGATGGAGAAATCCTCCCCCTGGGAAAGGCCCGGGGTAAGAAGCGAATGTTTGAATACCTCC
TTGAAAAAATGGAGGAGAGGGGAAAGGACCTGGGTAGTCAGTTTATAGGACTAAATCATTCTGCTAATCCAGGGCTAGCC
AATAAACTAAAAGATATGATTAAGGAAAAATACGGGGTTGAGGAATTTTATATTTCCGAAATAGGAGCCGCTATAGGTTC
CCATGTTGGGAAAAATACAGTATCAGTCTTTTTCCAGAGCAAGGATAGAGTTGCCAGCCCTGAAGTAAGATAA

Upstream 100 bases:

>100_bases
TTTCATGAATATTATTATTAGGTTACAAGAAAAAAGTGACGGGTTGTCAGATTGAGGTGAAGTATGTCAATCACAGTCAA
ATAAAGGAAGGGTGGAGTAG

Downstream 100 bases:

>100_bases
CTAAAGCGGTGATTGCAATGTCTGTTGTCAGTATACGGAATATAAATAAGTCCTATGGTATAGAGGAAGTATTAAAGGGT
TTTTCTCTGGATATAAACCA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MEKVKIFTDSCSDLSPDVISRYDIKMLSTPVYFGEERYYDRDNLTPGEFYNKLENYSGVPKTSQIGPTVFESEFKKALEE
GYKVLSLNFSSKLSGIFESAALAKKNIGSDDIHVIDTRCASVGFGLSVIYAARLLEEGRDLNEVIESTLDYCAHQEHIFA
VGSLEMLKRGGRIKSTTAFIGNILKIKPILHFRDGEILPLGKARGKKRMFEYLLEKMEERGKDLGSQFIGLNHSANPGLA
NKLKDMIKEKYGVEEFYISEIGAAIGSHVGKNTVSVFFQSKDRVASPEVR

Sequences:

>Translated_290_residues
MEKVKIFTDSCSDLSPDVISRYDIKMLSTPVYFGEERYYDRDNLTPGEFYNKLENYSGVPKTSQIGPTVFESEFKKALEE
GYKVLSLNFSSKLSGIFESAALAKKNIGSDDIHVIDTRCASVGFGLSVIYAARLLEEGRDLNEVIESTLDYCAHQEHIFA
VGSLEMLKRGGRIKSTTAFIGNILKIKPILHFRDGEILPLGKARGKKRMFEYLLEKMEERGKDLGSQFIGLNHSANPGLA
NKLKDMIKEKYGVEEFYISEIGAAIGSHVGKNTVSVFFQSKDRVASPEVR
>Mature_290_residues
MEKVKIFTDSCSDLSPDVISRYDIKMLSTPVYFGEERYYDRDNLTPGEFYNKLENYSGVPKTSQIGPTVFESEFKKALEE
GYKVLSLNFSSKLSGIFESAALAKKNIGSDDIHVIDTRCASVGFGLSVIYAARLLEEGRDLNEVIESTLDYCAHQEHIFA
VGSLEMLKRGGRIKSTTAFIGNILKIKPILHFRDGEILPLGKARGKKRMFEYLLEKMEERGKDLGSQFIGLNHSANPGLA
NKLKDMIKEKYGVEEFYISEIGAAIGSHVGKNTVSVFFQSKDRVASPEVR

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 32450; Mature: 32450

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVKIFTDSCSDLSPDVISRYDIKMLSTPVYFGEERYYDRDNLTPGEFYNKLENYSGVP
CCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCHHCCCCCCCCHHHHHHHHHHCCCCC
KTSQIGPTVFESEFKKALEEGYKVLSLNFSSKLSGIFESAALAKKNIGSDDIHVIDTRCA
CCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
SVGFGLSVIYAARLLEEGRDLNEVIESTLDYCAHQEHIFAVGSLEMLKRGGRIKSTTAFI
HHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHEEECCCHHHHHCCCCCCHHHHHH
GNILKIKPILHFRDGEILPLGKARGKKRMFEYLLEKMEERGKDLGSQFIGLNHSANPGLA
HHHHHEEEEEEECCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
NKLKDMIKEKYGVEEFYISEIGAAIGSHVGKNTVSVFFQSKDRVASPEVR
HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCC
>Mature Secondary Structure
MEKVKIFTDSCSDLSPDVISRYDIKMLSTPVYFGEERYYDRDNLTPGEFYNKLENYSGVP
CCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCHHCCCCCCCCHHHHHHHHHHCCCCC
KTSQIGPTVFESEFKKALEEGYKVLSLNFSSKLSGIFESAALAKKNIGSDDIHVIDTRCA
CCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
SVGFGLSVIYAARLLEEGRDLNEVIESTLDYCAHQEHIFAVGSLEMLKRGGRIKSTTAFI
HHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHEEECCCHHHHHCCCCCCHHHHHH
GNILKIKPILHFRDGEILPLGKARGKKRMFEYLLEKMEERGKDLGSQFIGLNHSANPGLA
HHHHHEEEEEEECCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
NKLKDMIKEKYGVEEFYISEIGAAIGSHVGKNTVSVFFQSKDRVASPEVR
HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9025291; 9353931; 9384377 [H]