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The map label for this gene is ydiF [H]

Identifier: 220932243

GI number: 220932243

Start: 1495019

End: 1496941

Strand: Reverse

Name: ydiF [H]

Synonym: Hore_14070

Alternate gene names: 220932243

Gene position: 1496941-1495019 (Counterclockwise)

Preceding gene: 220932244

Following gene: 220932239

Centisome position: 58.06

GC content: 37.44

Gene sequence:

>1923_bases
ATGTCTGTTGTCAGTATACGGAATATAAATAAGTCCTATGGTATAGAGGAAGTATTAAAGGGTTTTTCTCTGGATATAAA
CCAGGGTGAAAAGGTAGGCCTGATCGGGGTCAATGGTTCTGGAAAAACAACTCTCTTTAAGATTATTTGTGGTCTTGAAC
CAGTTTCATCAGGTGACCTGGTTTTAAAGAAGGGGTTGAGTATTGGGTATTTAAATCAGATGCCAGATTTTAATCCCGAG
AACACTCTGTATCAGGAACTTAAGAAAGTATTTTCTGATTTAATTATGATGGAAAGGGAAATAAATAATTTAGAAATTAA
AATAGCCGAGCAGGGGAAAAGAGCAGAAGATGATGAAGATGTTAAATTTTTGATGAAAAAATACAGCAAGCTCAGAAACA
ATTTTGAAATGCGCGGTGGATATGGGTATAATAGCAAAATAAAACAGGTGGCTGTTGGCCTTGGTTTTACCCATGAAGAG
CTTGATAAAAAAGTTGGTAAGCTGAGTGGTGGAGAAAAAACCAGGCTGGGGCTGGTTAAATTACTACTTTCTGAGCCTGA
TTTATTACTCCTCGATGAGCCTACCAACCATTTAGACCTTTCCTCTATTGACTGGCTTGAGAACTTTCTCCAGGATTATA
GGGGAACGGTTATTGTAATTTCTCATGATAGATATTTTCTTGATCATGTTGTCGACCGTATTGTAGAACTCAGAGATGGC
CGGGATGAGGTTTATTACGGGAACTATTCGTATTATCTTAAAGAACGGAAAAAGAGGTATGAACAGCAATTAAAAAAGTA
TGAAAACCAGCAAAAAGAGATTAAAAAAATGGAGGAGGCCATAAAAAGATTAAGACAGTGGGGAAGTCAGGGTGATAATC
AAAAATTTTTTAAAAAGGCCAAAAGTATGGAAAAAGCCCTGGAACGGATGGAAAAGATTGATAAGCCAACCCTTGATGAC
CAAAAAATAAAACTTGATTTTTCGGTAGAAAAAAGAAGTGGTAATGAAGTTTTGAGGGTGGAGAGTTTGAGTAAATCCTT
TGGAACCAACGTTTTGTTTGAGGATTTAAAACTGGGTATCTACTGGGGAGAGAAAGTAGCTGTCATCGGTAAAAATGGTA
CTGGAAAAACAACCTTGTTAAAGATTATTACAGGTGACCTTAAACCTGATTCAGGGAGAATTAAACTGGGGAGTAATGTG
AGAATAGGTTATTATAGTCAGACCTTTGAAGGTTTTGATCCTGAGGATGACCTGGTTACTGCCCTACAACGGGAATTAGT
GGTCAGTGAGGGTGAGGCCAGAAATAAACTGGCATCATTTCTATTTACCGGGGATGATGTCTTTAAAAAGGTAAAGGATT
TAAGTGGAGGAGAAAAGAGTCGTTTAAGGTTATTACAACTGATGTATGGGGATTATAATTTTCTGGTACTTGATGAACCT
ACCAACCACCTGGACCTGACTTCGCGGGAAGTGCTGGAAGAAGCTCTGAAGCAATACCCGGGGACCATGTTGATAGTTTC
TCATGATCGCTATTTATTAAATAAAGTAACCAACTTAACATATGAACTGGAAGATGGCTCTTTAACCAAATACCATGGAA
ATTATGATTACTATTTAAAGAAGAAAAAGCAGCTGAATGGAGATATAAGTTCTCAGGGGAAAAGCGGGAAAGAAGAAAAG
ACAAAATCTGATTATGAGCTGCGGAAGGAACAAAAGAAGAAGGAACGCAAACGAAAGAAACAGTTAAAAAGGCTTGAAGA
GGATATTGAGGCCCTGGAGGTAAGAAAGGAAACAATTGAACAGGAAATGGTTAGACCTGAAAACCTGGATGATTTTGAAT
TGTTAGCCAGCCTTAAGGAAGAATACATGAATATTGAACAGGAGTTAAATGAGTTATATTCCAGATGGGAAAAAATGATA
TAA

Upstream 100 bases:

>100_bases
CTATAGGTTCCCATGTTGGGAAAAATACAGTATCAGTCTTTTTCCAGAGCAAGGATAGAGTTGCCAGCCCTGAAGTAAGA
TAACTAAAGCGGTGATTGCA

Downstream 100 bases:

>100_bases
AAAAAGGGATAGGTTATATATAACCTATCCCGAAAGGGAGGGCTGCTAATAGATTAGTATTGCGACCTGGTTCCCTGGTT
CATCTGGTAGTAAGATTGTC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MSVVSIRNINKSYGIEEVLKGFSLDINQGEKVGLIGVNGSGKTTLFKIICGLEPVSSGDLVLKKGLSIGYLNQMPDFNPE
NTLYQELKKVFSDLIMMEREINNLEIKIAEQGKRAEDDEDVKFLMKKYSKLRNNFEMRGGYGYNSKIKQVAVGLGFTHEE
LDKKVGKLSGGEKTRLGLVKLLLSEPDLLLLDEPTNHLDLSSIDWLENFLQDYRGTVIVISHDRYFLDHVVDRIVELRDG
RDEVYYGNYSYYLKERKKRYEQQLKKYENQQKEIKKMEEAIKRLRQWGSQGDNQKFFKKAKSMEKALERMEKIDKPTLDD
QKIKLDFSVEKRSGNEVLRVESLSKSFGTNVLFEDLKLGIYWGEKVAVIGKNGTGKTTLLKIITGDLKPDSGRIKLGSNV
RIGYYSQTFEGFDPEDDLVTALQRELVVSEGEARNKLASFLFTGDDVFKKVKDLSGGEKSRLRLLQLMYGDYNFLVLDEP
TNHLDLTSREVLEEALKQYPGTMLIVSHDRYLLNKVTNLTYELEDGSLTKYHGNYDYYLKKKKQLNGDISSQGKSGKEEK
TKSDYELRKEQKKKERKRKKQLKRLEEDIEALEVRKETIEQEMVRPENLDDFELLASLKEEYMNIEQELNELYSRWEKMI

Sequences:

>Translated_640_residues
MSVVSIRNINKSYGIEEVLKGFSLDINQGEKVGLIGVNGSGKTTLFKIICGLEPVSSGDLVLKKGLSIGYLNQMPDFNPE
NTLYQELKKVFSDLIMMEREINNLEIKIAEQGKRAEDDEDVKFLMKKYSKLRNNFEMRGGYGYNSKIKQVAVGLGFTHEE
LDKKVGKLSGGEKTRLGLVKLLLSEPDLLLLDEPTNHLDLSSIDWLENFLQDYRGTVIVISHDRYFLDHVVDRIVELRDG
RDEVYYGNYSYYLKERKKRYEQQLKKYENQQKEIKKMEEAIKRLRQWGSQGDNQKFFKKAKSMEKALERMEKIDKPTLDD
QKIKLDFSVEKRSGNEVLRVESLSKSFGTNVLFEDLKLGIYWGEKVAVIGKNGTGKTTLLKIITGDLKPDSGRIKLGSNV
RIGYYSQTFEGFDPEDDLVTALQRELVVSEGEARNKLASFLFTGDDVFKKVKDLSGGEKSRLRLLQLMYGDYNFLVLDEP
TNHLDLTSREVLEEALKQYPGTMLIVSHDRYLLNKVTNLTYELEDGSLTKYHGNYDYYLKKKKQLNGDISSQGKSGKEEK
TKSDYELRKEQKKKERKRKKQLKRLEEDIEALEVRKETIEQEMVRPENLDDFELLASLKEEYMNIEQELNELYSRWEKMI
>Mature_639_residues
SVVSIRNINKSYGIEEVLKGFSLDINQGEKVGLIGVNGSGKTTLFKIICGLEPVSSGDLVLKKGLSIGYLNQMPDFNPEN
TLYQELKKVFSDLIMMEREINNLEIKIAEQGKRAEDDEDVKFLMKKYSKLRNNFEMRGGYGYNSKIKQVAVGLGFTHEEL
DKKVGKLSGGEKTRLGLVKLLLSEPDLLLLDEPTNHLDLSSIDWLENFLQDYRGTVIVISHDRYFLDHVVDRIVELRDGR
DEVYYGNYSYYLKERKKRYEQQLKKYENQQKEIKKMEEAIKRLRQWGSQGDNQKFFKKAKSMEKALERMEKIDKPTLDDQ
KIKLDFSVEKRSGNEVLRVESLSKSFGTNVLFEDLKLGIYWGEKVAVIGKNGTGKTTLLKIITGDLKPDSGRIKLGSNVR
IGYYSQTFEGFDPEDDLVTALQRELVVSEGEARNKLASFLFTGDDVFKKVKDLSGGEKSRLRLLQLMYGDYNFLVLDEPT
NHLDLTSREVLEEALKQYPGTMLIVSHDRYLLNKVTNLTYELEDGSLTKYHGNYDYYLKKKKQLNGDISSQGKSGKEEKT
KSDYELRKEQKKKERKRKKQLKRLEEDIEALEVRKETIEQEMVRPENLDDFELLASLKEEYMNIEQELNELYSRWEKMI

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=542, Percent_Identity=32.8413284132841, Blast_Score=259, Evalue=8e-69,
Organism=Homo sapiens, GI10947137, Length=556, Percent_Identity=30.2158273381295, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI27881506, Length=556, Percent_Identity=30.2158273381295, Blast_Score=233, Evalue=5e-61,
Organism=Homo sapiens, GI10947135, Length=529, Percent_Identity=30.6238185255198, Blast_Score=203, Evalue=4e-52,
Organism=Homo sapiens, GI69354671, Length=529, Percent_Identity=30.6238185255198, Blast_Score=202, Evalue=6e-52,
Organism=Escherichia coli, GI1789751, Length=620, Percent_Identity=33.0645161290323, Blast_Score=330, Evalue=1e-91,
Organism=Escherichia coli, GI2367384, Length=540, Percent_Identity=34.8148148148148, Blast_Score=317, Evalue=1e-87,
Organism=Escherichia coli, GI1787041, Length=552, Percent_Identity=34.7826086956522, Blast_Score=286, Evalue=3e-78,
Organism=Escherichia coli, GI1787182, Length=656, Percent_Identity=30.1829268292683, Blast_Score=257, Evalue=2e-69,
Organism=Escherichia coli, GI1788165, Length=191, Percent_Identity=28.2722513089005, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1787500, Length=246, Percent_Identity=26.0162601626016, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786703, Length=251, Percent_Identity=26.6932270916335, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI87082268, Length=203, Percent_Identity=32.0197044334975, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789891, Length=236, Percent_Identity=24.5762711864407, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788761, Length=216, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI87081791, Length=199, Percent_Identity=28.1407035175879, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1788225, Length=223, Percent_Identity=26.457399103139, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=547, Percent_Identity=30.3473491773309, Blast_Score=244, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17555318, Length=567, Percent_Identity=30.6878306878307, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17553372, Length=551, Percent_Identity=32.3049001814882, Blast_Score=230, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17555800, Length=507, Percent_Identity=24.2603550295858, Blast_Score=89, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=32.015065913371, Blast_Score=234, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6321121, Length=545, Percent_Identity=31.0091743119266, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6323278, Length=398, Percent_Identity=26.1306532663317, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=404, Percent_Identity=26.2376237623762, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=396, Percent_Identity=25.2525252525253, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24642252, Length=563, Percent_Identity=31.0834813499112, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI18859989, Length=563, Percent_Identity=31.0834813499112, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24641342, Length=561, Percent_Identity=30.4812834224599, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24666836, Length=544, Percent_Identity=30.6985294117647, Blast_Score=243, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 74136; Mature: 74005

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVSIRNINKSYGIEEVLKGFSLDINQGEKVGLIGVNGSGKTTLFKIICGLEPVSSGDL
CCEEEEECCCHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCH
VLKKGLSIGYLNQMPDFNPENTLYQELKKVFSDLIMMEREINNLEIKIAEQGKRAEDDED
HHHCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH
VKFLMKKYSKLRNNFEMRGGYGYNSKIKQVAVGLGFTHEELDKKVGKLSGGEKTRLGLVK
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHH
LLLSEPDLLLLDEPTNHLDLSSIDWLENFLQDYRGTVIVISHDRYFLDHVVDRIVELRDG
HHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCC
RDEVYYGNYSYYLKERKKRYEQQLKKYENQQKEIKKMEEAIKRLRQWGSQGDNQKFFKKA
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KSMEKALERMEKIDKPTLDDQKIKLDFSVEKRSGNEVLRVESLSKSFGTNVLFEDLKLGI
HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHCCCHHHHHHEEEE
YWGEKVAVIGKNGTGKTTLLKIITGDLKPDSGRIKLGSNVRIGYYSQTFEGFDPEDDLVT
EECCEEEEEECCCCCHHHEEEEEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCHHHHH
ALQRELVVSEGEARNKLASFLFTGDDVFKKVKDLSGGEKSRLRLLQLMYGDYNFLVLDEP
HHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCC
TNHLDLTSREVLEEALKQYPGTMLIVSHDRYLLNKVTNLTYELEDGSLTKYHGNYDYYLK
CCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCEEEECCCCEEEEECCCHHEEE
KKKQLNGDISSQGKSGKEEKTKSDYELRKEQKKKERKRKKQLKRLEEDIEALEVRKETIE
HHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEMVRPENLDDFELLASLKEEYMNIEQELNELYSRWEKMI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVVSIRNINKSYGIEEVLKGFSLDINQGEKVGLIGVNGSGKTTLFKIICGLEPVSSGDL
CEEEEECCCHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCH
VLKKGLSIGYLNQMPDFNPENTLYQELKKVFSDLIMMEREINNLEIKIAEQGKRAEDDED
HHHCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH
VKFLMKKYSKLRNNFEMRGGYGYNSKIKQVAVGLGFTHEELDKKVGKLSGGEKTRLGLVK
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHH
LLLSEPDLLLLDEPTNHLDLSSIDWLENFLQDYRGTVIVISHDRYFLDHVVDRIVELRDG
HHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCC
RDEVYYGNYSYYLKERKKRYEQQLKKYENQQKEIKKMEEAIKRLRQWGSQGDNQKFFKKA
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KSMEKALERMEKIDKPTLDDQKIKLDFSVEKRSGNEVLRVESLSKSFGTNVLFEDLKLGI
HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHCCCHHHHHHEEEE
YWGEKVAVIGKNGTGKTTLLKIITGDLKPDSGRIKLGSNVRIGYYSQTFEGFDPEDDLVT
EECCEEEEEECCCCCHHHEEEEEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCHHHHH
ALQRELVVSEGEARNKLASFLFTGDDVFKKVKDLSGGEKSRLRLLQLMYGDYNFLVLDEP
HHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCC
TNHLDLTSREVLEEALKQYPGTMLIVSHDRYLLNKVTNLTYELEDGSLTKYHGNYDYYLK
CCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCEEEECCCCEEEEECCCHHEEE
KKKQLNGDISSQGKSGKEEKTKSDYELRKEQKKKERKRKKQLKRLEEDIEALEVRKETIE
HHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEMVRPENLDDFELLASLKEEYMNIEQELNELYSRWEKMI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]