Click here to switch to the map view.

The map label for this gene is cynT [H]

Identifier: 220932229

GI number: 220932229

Start: 1483933

End: 1484535

Strand: Reverse

Name: cynT [H]

Synonym: Hore_13920

Alternate gene names: 220932229

Gene position: 1484535-1483933 (Counterclockwise)

Preceding gene: 220932230

Following gene: 220932228

Centisome position: 57.58

GC content: 30.51

Gene sequence:

>603_bases
ATGGATAAACTGTTTAAAGGTGTAAAAAAATTTAGTAAACATGAATATAAGAATTACAAAACACTGTATAAAAATTTAAG
TAACAAACAAAGTCCCCATACACTATTTATAACCTGCTCTGATTCCAGAGTGGTTCCCGGTTTAATAACTGACACTTTAC
CCGGAGAACTTTTTATTATCCGTAATGTTGCCAATATAGTCCCACCATATAGCCAGGCCTTTGATTTTGTGTCTACTACA
TCTGGCATAGAATATGCTGTAAATGTATTACAGGTCAAAAATATCGTAATATGTGGCCATTCTAATTGTGGGGGTTGTAA
AGCATTATTCATGGATGAAAAAATAAATGATACCCCTTATACCCAAAAGTGGGTTCAATTAGTTGAACCTTTAAAGGAGA
AGGTTCTAAAATTGAAGTATGATTTTAATTACGAGAGAGATTATCAGTTAGTTGAACAGGAAAATATTATTTTACAAATG
AAAAATTTACTGACATACCCTTATATTAAGAATAAATATCAGAATGCAGGCCTTAAAATCTACGGATGGTATTATGATAT
AGGTAACGGAATTGTATATAATTATAATAAATCAAAATGTTAG

Upstream 100 bases:

>100_bases
TCGGGGCCTTTTTTCACTATTTATTAGTACTTACAGCAGTTGTTTGAAATTTAAAGTTCTAAATTTTTTTCAGTGTAAAT
TTAAAGAGGTGGTACTAATT

Downstream 100 bases:

>100_bases
AATTATAACCAGGTTTAAACCTGGTTATTTTTTAAAAAAAAACAGCAAGAAATTTTAAATATTACTTGACAGCAGTAAAG
TAATATGGTATAATATATAT

Product: Carbonate dehydratase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MDKLFKGVKKFSKHEYKNYKTLYKNLSNKQSPHTLFITCSDSRVVPGLITDTLPGELFIIRNVANIVPPYSQAFDFVSTT
SGIEYAVNVLQVKNIVICGHSNCGGCKALFMDEKINDTPYTQKWVQLVEPLKEKVLKLKYDFNYERDYQLVEQENIILQM
KNLLTYPYIKNKYQNAGLKIYGWYYDIGNGIVYNYNKSKC

Sequences:

>Translated_200_residues
MDKLFKGVKKFSKHEYKNYKTLYKNLSNKQSPHTLFITCSDSRVVPGLITDTLPGELFIIRNVANIVPPYSQAFDFVSTT
SGIEYAVNVLQVKNIVICGHSNCGGCKALFMDEKINDTPYTQKWVQLVEPLKEKVLKLKYDFNYERDYQLVEQENIILQM
KNLLTYPYIKNKYQNAGLKIYGWYYDIGNGIVYNYNKSKC
>Mature_200_residues
MDKLFKGVKKFSKHEYKNYKTLYKNLSNKQSPHTLFITCSDSRVVPGLITDTLPGELFIIRNVANIVPPYSQAFDFVSTT
SGIEYAVNVLQVKNIVICGHSNCGGCKALFMDEKINDTPYTQKWVQLVEPLKEKVLKLKYDFNYERDYQLVEQENIILQM
KNLLTYPYIKNKYQNAGLKIYGWYYDIGNGIVYNYNKSKC

Specific function: Reversible Hydration Of Carbon Dioxide. Carbon Dioxide Formed In The Bicarbonate-Dependent Decomposition Of Cyanate By Cyanase (Cyns) Diffuses Out Of The Cell Faster Than It Would Be Hydrated To Bicarbonate, So The Apparent Function Of This Enzyme Is To C

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1786534, Length=198, Percent_Identity=35.8585858585859, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1786318, Length=197, Percent_Identity=29.4416243654822, Blast_Score=92, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI25147564, Length=232, Percent_Identity=25.4310344827586, Blast_Score=90, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI115532990, Length=116, Percent_Identity=25.8620689655172, Blast_Score=73, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6324292, Length=169, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24645213, Length=234, Percent_Identity=21.3675213675214, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 23233; Mature: 23233

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLFKGVKKFSKHEYKNYKTLYKNLSNKQSPHTLFITCSDSRVVPGLITDTLPGELFII
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCCCEEEE
RNVANIVPPYSQAFDFVSTTSGIEYAVNVLQVKNIVICGHSNCGGCKALFMDEKINDTPY
ECHHHHCCCHHHHHHHHHCCCCHHHHHHHEEEEEEEEECCCCCCCEEEEEECCCCCCCCH
TQKWVQLVEPLKEKVLKLKYDFNYERDYQLVEQENIILQMKNLLTYPYIKNKYQNAGLKI
HHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHCCCCEEE
YGWYYDIGNGIVYNYNKSKC
EEEEEECCCCEEEECCCCCC
>Mature Secondary Structure
MDKLFKGVKKFSKHEYKNYKTLYKNLSNKQSPHTLFITCSDSRVVPGLITDTLPGELFII
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCCCEEEE
RNVANIVPPYSQAFDFVSTTSGIEYAVNVLQVKNIVICGHSNCGGCKALFMDEKINDTPY
ECHHHHCCCHHHHHHHHHCCCCHHHHHHHEEEEEEEEECCCCCCCEEEEEECCCCCCCCH
TQKWVQLVEPLKEKVLKLKYDFNYERDYQLVEQENIILQMKNLLTYPYIKNKYQNAGLKI
HHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHCCCCEEE
YGWYYDIGNGIVYNYNKSKC
EEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]