| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932218
Identifier: 220932218
GI number: 220932218
Start: 1473003
End: 1473302
Strand: Reverse
Name: 220932218
Synonym: Hore_13790
Alternate gene names: NA
Gene position: 1473302-1473003 (Counterclockwise)
Preceding gene: 220932219
Following gene: 220932217
Centisome position: 57.15
GC content: 18.33
Gene sequence:
>300_bases TTGAAGCCTAATGATGCTAAATTTGTGTTAAAAGAAATTTATAGAATATTAAAGAGTAAAGGAAAAATAATTCTTAAATT GAATCCATATTTTAATCCAAATGAATTAGAAAAAGATAATAATTTTAAAAAAATAAAAAAAGATTTTTACAAAGAAAGAT CAGGTTTGTACTTTTGGAATATAAGTAATAAACAAATTAAAAAAATTATAGCTCCATATTATAAGATTTGCAAATATAAA GAAATTGAATTTAAAGATTATAATATGATTAATAGAGTGTATTACCTAAAGAAAACTTAA
Upstream 100 bases:
>100_bases TACAGGATAAATGTAATTATTTATATGGAGGAATTGATTTATTAAAAAAGTTAATGATAATACATATGATGGAGCAATTT TATTTAATATAATTGATAAT
Downstream 100 bases:
>100_bases TAACTTCGTCTAACATGGTGTTCCCATCACGCCAAAGAGCGTGGCTACTCTTCGAGACATGCTCTCTGTCACAAAGTTTG CTATTAATTAGGTAAGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MKPNDAKFVLKEIYRILKSKGKIILKLNPYFNPNELEKDNNFKKIKKDFYKERSGLYFWNISNKQIKKIIAPYYKICKYK EIEFKDYNMINRVYYLKKT
Sequences:
>Translated_99_residues MKPNDAKFVLKEIYRILKSKGKIILKLNPYFNPNELEKDNNFKKIKKDFYKERSGLYFWNISNKQIKKIIAPYYKICKYK EIEFKDYNMINRVYYLKKT >Mature_99_residues MKPNDAKFVLKEIYRILKSKGKIILKLNPYFNPNELEKDNNFKKIKKDFYKERSGLYFWNISNKQIKKIIAPYYKICKYK EIEFKDYNMINRVYYLKKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12233; Mature: 12233
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNDAKFVLKEIYRILKSKGKIILKLNPYFNPNELEKDNNFKKIKKDFYKERSGLYFWN CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE ISNKQIKKIIAPYYKICKYKEIEFKDYNMINRVYYLKKT CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEECC >Mature Secondary Structure MKPNDAKFVLKEIYRILKSKGKIILKLNPYFNPNELEKDNNFKKIKKDFYKERSGLYFWN CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE ISNKQIKKIIAPYYKICKYKEIEFKDYNMINRVYYLKKT CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA