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The map label for this gene is 220932195

Identifier: 220932195

GI number: 220932195

Start: 1454795

End: 1456135

Strand: Reverse

Name: 220932195

Synonym: Hore_13580

Alternate gene names: NA

Gene position: 1456135-1454795 (Counterclockwise)

Preceding gene: 220932196

Following gene: 220932194

Centisome position: 56.48

GC content: 31.32

Gene sequence:

>1341_bases
ATGAAAAAAAAGTTATTATTAATTAATCCATCAAATCCCTGTAAAACAGGTTTAACAGTTAATAAAAGTTCAAGATTTCC
ACCTTTAGGTTTAGGTATAATTGCAGCACTTACACCAAGCGATTGGAATATAAAAATTGTTGATGAGAATTTTGATACTT
TTAGATATGAAGATGCAGATTTGGTAGGGTTAACAGCGTTTACTTCTTCAGCAACAAGGGCTTATGAAATTGCTAAACAA
TACCGGGAAAGAGGCATCCCAACAATTATAGGTGGAATACATGCCTCTATGATGCCGGATGAAGCCAAACAATATGTAGA
TACAGTAGTAATAGGTGAAGCTGAGGGGATATGGCCTGAAGTCATATCAGATTTTGAAGAAGGAAAACTGAAAAAAATTT
ATCAAAGCAAATTAAATGAAGCAGATATAATCCCAAAAGCCAGACATGATTTATTTCATCCAGGATATATGTTTGGAGCA
GTACAAACAGCGAGGGGTTGCCCTATGGATTGCGAATTTTGTTCAGTTACACAATTTAATGGGTATAAATACCGTCAAAG
ACCAATTAAAGATGTATTAGATGAATTAGAAAGTATACCACAAAAAATGATATTTTTTGTTGATGATAACATTCTTGGAC
ATGGAAAAAACGCTAATGAGCGTGCTATAAAACTTTTTAAGGGTATGATAAATCGTGGAATAAAAAAAGAATGGTTTTGC
CAGGCATCAATTAATTTTGCTGAAAATGAAGAAGTACTAAAATATGCCGCAAAAAGTGGTTGTAAAATGGTTTTTATAGG
TTTAGAAGCTGAAGATGTAGAATCCTTAGATAGTGTAAACAAAAAAATGAATATTAAAGTAGGTTCAAATAAATATAAGG
ATGTAATAGATAAAATTAATAGCTATAAAATAGCTGTTTTGGGATCTTTTATTTACGGGCTAGATAATGATACTATAGAA
TCTCTTCAGAGAAGAATTGAATATATAATTAAATGTCCAGTAGATGTTATGCAAACGACTATACTGACTCCACTTCCAGG
CACTAGGTTATTTAAAAAGTTATCAGATGAAGGAAGATTGCTCTATAATAATTATCCTGATGATTGGGTACATTTTGATA
TGACTGAAGTTACCTATAATCCAGTACATATGACTCCAGAACAATTATCGCAATTGATGAGTACCAGTAATTGCCGTTTA
TATTCAATGAAAGTAATATTATCAAAATTTTTTAAAACGTTATTTTCTACAAAAAGCTTGAGTGCAAGTATTTGGGCATT
AAGTTCTAATTTCAATTATCGTAATGTTGCTCTTGGTATAGAGAAGGAAAAACTTAAGTAA

Upstream 100 bases:

>100_bases
CGGAGGAGGATATTTACATTTTTCAAAATAATGAGCATGAATTTGAAAAATATGGAGTTCGTAAAATTCTATGACAAAAC
TTACGGAAGGAATGAATTTT

Downstream 100 bases:

>100_bases
AATCAGGGAAACGTTCATATAACACGAGATTATGGTTTCGATGTGCTTCATCCAAGTTCATTCAACTGTAGTTTTTTTTA
AAAGGCCGGTAGTTCAAAAC

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKKKLLLINPSNPCKTGLTVNKSSRFPPLGLGIIAALTPSDWNIKIVDENFDTFRYEDADLVGLTAFTSSATRAYEIAKQ
YRERGIPTIIGGIHASMMPDEAKQYVDTVVIGEAEGIWPEVISDFEEGKLKKIYQSKLNEADIIPKARHDLFHPGYMFGA
VQTARGCPMDCEFCSVTQFNGYKYRQRPIKDVLDELESIPQKMIFFVDDNILGHGKNANERAIKLFKGMINRGIKKEWFC
QASINFAENEEVLKYAAKSGCKMVFIGLEAEDVESLDSVNKKMNIKVGSNKYKDVIDKINSYKIAVLGSFIYGLDNDTIE
SLQRRIEYIIKCPVDVMQTTILTPLPGTRLFKKLSDEGRLLYNNYPDDWVHFDMTEVTYNPVHMTPEQLSQLMSTSNCRL
YSMKVILSKFFKTLFSTKSLSASIWALSSNFNYRNVALGIEKEKLK

Sequences:

>Translated_446_residues
MKKKLLLINPSNPCKTGLTVNKSSRFPPLGLGIIAALTPSDWNIKIVDENFDTFRYEDADLVGLTAFTSSATRAYEIAKQ
YRERGIPTIIGGIHASMMPDEAKQYVDTVVIGEAEGIWPEVISDFEEGKLKKIYQSKLNEADIIPKARHDLFHPGYMFGA
VQTARGCPMDCEFCSVTQFNGYKYRQRPIKDVLDELESIPQKMIFFVDDNILGHGKNANERAIKLFKGMINRGIKKEWFC
QASINFAENEEVLKYAAKSGCKMVFIGLEAEDVESLDSVNKKMNIKVGSNKYKDVIDKINSYKIAVLGSFIYGLDNDTIE
SLQRRIEYIIKCPVDVMQTTILTPLPGTRLFKKLSDEGRLLYNNYPDDWVHFDMTEVTYNPVHMTPEQLSQLMSTSNCRL
YSMKVILSKFFKTLFSTKSLSASIWALSSNFNYRNVALGIEKEKLK
>Mature_446_residues
MKKKLLLINPSNPCKTGLTVNKSSRFPPLGLGIIAALTPSDWNIKIVDENFDTFRYEDADLVGLTAFTSSATRAYEIAKQ
YRERGIPTIIGGIHASMMPDEAKQYVDTVVIGEAEGIWPEVISDFEEGKLKKIYQSKLNEADIIPKARHDLFHPGYMFGA
VQTARGCPMDCEFCSVTQFNGYKYRQRPIKDVLDELESIPQKMIFFVDDNILGHGKNANERAIKLFKGMINRGIKKEWFC
QASINFAENEEVLKYAAKSGCKMVFIGLEAEDVESLDSVNKKMNIKVGSNKYKDVIDKINSYKIAVLGSFIYGLDNDTIE
SLQRRIEYIIKCPVDVMQTTILTPLPGTRLFKKLSDEGRLLYNNYPDDWVHFDMTEVTYNPVHMTPEQLSQLMSTSNCRL
YSMKVILSKFFKTLFSTKSLSASIWALSSNFNYRNVALGIEKEKLK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 50641; Mature: 50641

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLLLINPSNPCKTGLTVNKSSRFPPLGLGIIAALTPSDWNIKIVDENFDTFRYEDAD
CCCCEEEECCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEECCCC
LVGLTAFTSSATRAYEIAKQYRERGIPTIIGGIHASMMPDEAKQYVDTVVIGEAEGIWPE
EEEEEEHHCCHHHHHHHHHHHHHCCCCEEECCHHHHCCCHHHHHHHHEEEEECCCCCCHH
VISDFEEGKLKKIYQSKLNEADIIPKARHDLFHPGYMFGAVQTARGCPMDCEFCSVTQFN
HHCCHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECC
GYKYRQRPIKDVLDELESIPQKMIFFVDDNILGHGKNANERAIKLFKGMINRGIKKEWFC
CCHHHCCHHHHHHHHHHHCHHHEEEEEECCEECCCCCCHHHHHHHHHHHHHCCCCCCEEE
QASINFAENEEVLKYAAKSGCKMVFIGLEAEDVESLDSVNKKMNIKVGSNKYKDVIDKIN
EECCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHC
SYKIAVLGSFIYGLDNDTIESLQRRIEYIIKCPVDVMQTTILTPLPGTRLFKKLSDEGRL
CEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCCE
LYNNYPDDWVHFDMTEVTYNPVHMTPEQLSQLMSTSNCRLYSMKVILSKFFKTLFSTKSL
EECCCCCCCEEEEHHHEEECCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCC
SASIWALSSNFNYRNVALGIEKEKLK
CEEEEEEECCCCEEEEEEECCHHHCC
>Mature Secondary Structure
MKKKLLLINPSNPCKTGLTVNKSSRFPPLGLGIIAALTPSDWNIKIVDENFDTFRYEDAD
CCCCEEEECCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEECCCC
LVGLTAFTSSATRAYEIAKQYRERGIPTIIGGIHASMMPDEAKQYVDTVVIGEAEGIWPE
EEEEEEHHCCHHHHHHHHHHHHHCCCCEEECCHHHHCCCHHHHHHHHEEEEECCCCCCHH
VISDFEEGKLKKIYQSKLNEADIIPKARHDLFHPGYMFGAVQTARGCPMDCEFCSVTQFN
HHCCHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECC
GYKYRQRPIKDVLDELESIPQKMIFFVDDNILGHGKNANERAIKLFKGMINRGIKKEWFC
CCHHHCCHHHHHHHHHHHCHHHEEEEEECCEECCCCCCHHHHHHHHHHHHHCCCCCCEEE
QASINFAENEEVLKYAAKSGCKMVFIGLEAEDVESLDSVNKKMNIKVGSNKYKDVIDKIN
EECCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHC
SYKIAVLGSFIYGLDNDTIESLQRRIEYIIKCPVDVMQTTILTPLPGTRLFKKLSDEGRL
CEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCCE
LYNNYPDDWVHFDMTEVTYNPVHMTPEQLSQLMSTSNCRLYSMKVILSKFFKTLFSTKSL
EECCCCCCCEEEEHHHEEECCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCC
SASIWALSSNFNYRNVALGIEKEKLK
CEEEEEEECCCCEEEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]