Click here to switch to the map view.

The map label for this gene is 220932186

Identifier: 220932186

GI number: 220932186

Start: 1446105

End: 1446281

Strand: Reverse

Name: 220932186

Synonym: Hore_13490

Alternate gene names: NA

Gene position: 1446281-1446105 (Counterclockwise)

Preceding gene: 220932187

Following gene: 220932185

Centisome position: 56.1

GC content: 31.64

Gene sequence:

>177_bases
ATGATAAAACCAGAAAAATTAAAAAGAGGAGATAAAGTAGCAACTGTAAGTTTGTCCTGGGGTGGGGCAGGGGATAAAGA
TTATAGGAACAGATATGAGATAGGTAAAATAAGAATAGAAAAATTATTTGGCTTAAAAGTTGTAGAAATGCCAAATAGTT
TAAAAGGCAGTCAATAA

Upstream 100 bases:

>100_bases
TCTTAAAAAACATTAACGACTCATATTAAAAACAAGATTCGCTACACCGTGTCTATTTCTTTTACATAAAGTACTAAAAG
GAGGTTTTCCAAATCCAATA

Downstream 100 bases:

>100_bases
ACTTCAGTAATTCTTAAAAGTTTAAGTATAATCTTGCGTGAGAAAGCATACGTGTATGTTATAATTAATGAAAATAGAAA
GAGTGAAATAATAATGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: LD-Carboxypeptidase; Peptidase; LD-Carboxypeptidase Family Protein; MccC Family Protein; Microcin C7 Self-Immunity Protein MccF

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MIKPEKLKRGDKVATVSLSWGGAGDKDYRNRYEIGKIRIEKLFGLKVVEMPNSLKGSQ

Sequences:

>Translated_58_residues
MIKPEKLKRGDKVATVSLSWGGAGDKDYRNRYEIGKIRIEKLFGLKVVEMPNSLKGSQ
>Mature_58_residues
MIKPEKLKRGDKVATVSLSWGGAGDKDYRNRYEIGKIRIEKLFGLKVVEMPNSLKGSQ

Specific function: Unknown

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6537; Mature: 6537

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPEKLKRGDKVATVSLSWGGAGDKDYRNRYEIGKIRIEKLFGLKVVEMPNSLKGSQ
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHCEEEEECCCCCCCCC
>Mature Secondary Structure
MIKPEKLKRGDKVATVSLSWGGAGDKDYRNRYEIGKIRIEKLFGLKVVEMPNSLKGSQ
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA