| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932139
Identifier: 220932139
GI number: 220932139
Start: 1397148
End: 1398098
Strand: Reverse
Name: 220932139
Synonym: Hore_13020
Alternate gene names: NA
Gene position: 1398098-1397148 (Counterclockwise)
Preceding gene: 220932140
Following gene: 220932138
Centisome position: 54.23
GC content: 38.07
Gene sequence:
>951_bases GTGATTGAATTTAAAAAAACAGAATTTAAAGGCTGGCAGGGTTATGAGTTAAAAAATAAGGTTATCAGTTTAATATTGTT GCCGGAGGTTGGTGGTAAGATAGTAAGTTTTAGCTATCGGGGACAGGATCTCTTTTTTAATTTGCCGGAAAATAGCACTT CTAAAATAGACCTTTCCCGTATAGGAGATGTTAAGTCTTATCGAAAGAAATTTGATTATGTGCCTACCGGTGGTTATAAA ACCTGGCTAGCTCCACAGTCAAAGTGGGACTGGCCTCCTTACCTTGATCTGGAACTGGGGTCATATAATATGTCTGTATT TCAGGAAAAAGATAAAATTCAAGTTGAGCTTACAAGTCCTGTCTGCCGGGAAAGTGGTATGAGGTTGATGAGGGTTATTA CCCTCAAAGCAGGAAGCCCGGAAGTTACTATTAAGCAGGGAATGGAAAATTGTTCAACCACTGACAGGACTTTTGGGCTC TGGGATGTTACTCAGATCCACGGAGAGGGCAGAGTTATATTCCCTATTCTTTCAGATGATAGTTTAGGTTATATTGTTAC CCCGGAAAAAAATAACTATACAGAGCGATATAATTTTGATGGCAAAAGTTTTATAAGTGTCCACTGTCCCGGTCAGGAAA TATTTAAACTGGGAACAGGTTATTCAAAAGGCTGGATTTTGACTCTGGTTGAAAAGGAAGACTGGCTTCTCGGTTATCTT AAAATATTCCCTGTTTTTTCTGGAGCCCGATTTGGACACGGATATGCCATGGAAGTTTTTGATACCAATAAATATAACTA TTTTGAAGTTGAAGTTCATGGTCCCTTAAATAAAATAAGACCACAGGATAAATATTTTTTTACTGAAGAATGGCGAGTGT TAAGCTGGGATAAAAAGTCCGATATTAAGGAGATCATGGAGACAGTTAAATCTATTGTACCTGATGGCTAA
Upstream 100 bases:
>100_bases GGCTAATTAAAAAAAACAATTTATTGAATAAAAAAGAATTTTAGTACAAATTTTATATATTAACTTTATAGAACAAATTT GATGGTAGAGGATGATCTAT
Downstream 100 bases:
>100_bases TCTTAAAAATTACAACTGTAATAGAGGGATATATTGTAAAAGGATAGATAAAAATGTTAACAAAATATTGAAATTATTTT TTAACTATGATATTTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSRIGDVKSYRKKFDYVPTGGYK TWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSPVCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGL WDVTQIHGEGRVIFPILSDDSLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKSDIKEIMETVKSIVPDG
Sequences:
>Translated_316_residues MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSRIGDVKSYRKKFDYVPTGGYK TWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSPVCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGL WDVTQIHGEGRVIFPILSDDSLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKSDIKEIMETVKSIVPDG >Mature_316_residues MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSRIGDVKSYRKKFDYVPTGGYK TWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSPVCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGL WDVTQIHGEGRVIFPILSDDSLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKSDIKEIMETVKSIVPDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36538; Mature: 36538
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSR CCCCCCCCCCCCCCEEHHCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEEHHH IGDVKSYRKKFDYVPTGGYKTWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSP HCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEECCC VCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGLWDVTQIHGEGRVIFPILSDD HHHHCCCEEEEEEEEECCCCCEEHHHCCCCCCCCCCEECEEEEEEECCCCEEEEEEECCC SLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL CCEEEECCCCCCCCEEECCCCCEEEEEECCCHHHHEECCCCCCCEEEEEEECCCCEEEEE KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKS EEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHCCCCCCEEEECCCEEEECCCHH DIKEIMETVKSIVPDG HHHHHHHHHHHHCCCC >Mature Secondary Structure MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSR CCCCCCCCCCCCCCEEHHCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEEHHH IGDVKSYRKKFDYVPTGGYKTWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSP HCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEECCC VCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGLWDVTQIHGEGRVIFPILSDD HHHHCCCEEEEEEEEECCCCCEEHHHCCCCCCCCCCEECEEEEEEECCCCEEEEEEECCC SLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL CCEEEECCCCCCCCEEECCCCCEEEEEECCCHHHHEECCCCCCCEEEEEEECCCCEEEEE KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKS EEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHCCCCCCEEEECCCEEEECCCHH DIKEIMETVKSIVPDG HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA