Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932136

Identifier: 220932136

GI number: 220932136

Start: 1393771

End: 1395267

Strand: Reverse

Name: 220932136

Synonym: Hore_12990

Alternate gene names: NA

Gene position: 1395267-1393771 (Counterclockwise)

Preceding gene: 220932137

Following gene: 220932135

Centisome position: 54.12

GC content: 35.47

Gene sequence:

>1497_bases
ATGGGATTTTTTGATAAATTAAAGAAATTTTTTAGGACAAGACAATTCAAATATGGTGGCAATACTCTGGTTATGGTGGT
TATGATAATAGGAATAATGGCTGTAGTTAACTACCTGGTATACCAGCACAATGTTCGATGGGATTTAACAGAAAATAAAA
GGTTTAGCCTGTCGGAAAAAACCATAAAAGTATTAAAAAATTTAGATCAGGAGGTTAAGGTAACTGGTTTTTTTAAGCCG
GGAAGTAATGTCAGGGTACTGGTTAGAAGATTATTAGATAGATATCAGGATTATACTGATAATTTAGAAGTAGAGTTTGT
TGACCCTGACCGGAATCCTTCAATAACAAAAGAATATAATGTGACTGCCTATGATACTATAGTTTTTGAGACTGAAAAAA
GGAAAAAAAAGATTACCAGATATAACCTGTTTACCTATGGTCCGGGATACCAGGATCAGAAATTTAAAGGTGAAGAGGAG
TTTACCAGGGCTTTAATAGATGTTACCAAAAATACTACAGCCAGTGTGTATTTTATAACCGGCCACGGGGAAAGTACTCT
AAATGAAGATCTCTATCAGTTTAAAGATGCCCTGACCGGTGAAGGTTATCAGGTAGACAGTATAAATCTTGTTAAAGATG
GTATACCTGATGATGCAAATATACTGGTTATTGCCGGACCCAGAAAAGATTATGCTATAAAAGAAATAGAATTAATCAAT
AAATTTATTAATCGCGGGGGAGACCTGATGGTTTTTTTAAACCCTTCACCAAATGACAATTTCAGGAATTTGATTAACTT
AATTGAAGAATGGGGAATTACTCCCCAGGATGACCTGGTTATAGACCGGAAACAGTCATATTTTTTTGACCCCTTAACTC
CCATTGCTGATTATGAATACCATAATATAACCAGCAAATTAATTTCAGATGATCTTTTAGTTATCTTACCCTATACCAGA
AGCTTTAAGGAGATATCTAATTATAAAGGGGATTATCAGATAGAATCTATTTTAAAAACAAGTAAAAATGCCTGGGGAGA
AACCCGTTATGAAGCTGAAAGGATAGCCCGGGATGAAAAGGATTTAAAGGGTCGATTCGATCTTGTATATACAGTTATGA
GACCTTTAAGTAATAAAGGTAATAATAATGACAAAATAATCGATAAAAGGAATAGTGAAACCTATGAAGAATCTGAACTT
GAAGATATTCAAAAGCTTATTGATGACCAGATGAGGGCAGTAGTCCTGGGGACATCAGCTATTATTAACAACAAAGTATT
ACCACAACAGGGCAACCGGGACTTCATGTTAAATTGCGTTAACTGGCTTGTCGGACAGGAAGAGCAGATCAGTATCAGGG
CTAAAGGTTTTGGTATTAAGTATCTGAGTCTAACTCCTGATGCGGGCAGGTTAATATTCTATAGTACTGTGTTCCTGATT
CCATTGTTGGTATTTGCAGTGGGTATAGTAATTTATCTAAGGAGGAGGCACCTGTAG

Upstream 100 bases:

>100_bases
ACCACCTGTTTTATTACTTTACCCTGACTATCTTTTTTATATTTCTTACAATCCAGAATATTGAAAGGCGCCGCTGGAAC
TAGTTAAGGGAGGGGAGAAT

Downstream 100 bases:

>100_bases
TATGAAATTCAAATCAACCCTGGTGCTTGCTATTATTTTTGTCTTCTTGCTGGGTTATGTATACTTCTTTGAATTAAATA
AACCTGTCCCTGAAGGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MGFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEKTIKVLKNLDQEVKVTGFFKP
GSNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYNVTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEE
FTRALIDVTKNTTASVYFITGHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELIN
KFINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEYHNITSKLISDDLLVILPYTR
SFKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEKDLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESEL
EDIQKLIDDQMRAVVLGTSAIINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLI
PLLVFAVGIVIYLRRRHL

Sequences:

>Translated_498_residues
MGFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEKTIKVLKNLDQEVKVTGFFKP
GSNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYNVTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEE
FTRALIDVTKNTTASVYFITGHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELIN
KFINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEYHNITSKLISDDLLVILPYTR
SFKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEKDLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESEL
EDIQKLIDDQMRAVVLGTSAIINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLI
PLLVFAVGIVIYLRRRHL
>Mature_497_residues
GFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEKTIKVLKNLDQEVKVTGFFKPG
SNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYNVTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEEF
TRALIDVTKNTTASVYFITGHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELINK
FINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEYHNITSKLISDDLLVILPYTRS
FKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEKDLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESELE
DIQKLIDDQMRAVVLGTSAIINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLIP
LLVFAVGIVIYLRRRHL

Specific function: Unknown

COG id: COG3225

COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57806; Mature: 57675

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEK
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH
TIKVLKNLDQEVKVTGFFKPGSNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYN
HHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEC
VTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEEFTRALIDVTKNTTASVYFIT
CEEEEEEEEECHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
GHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELIN
CCCCCHHHHHHHHHHHHHCCCCEEECCEEHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH
KFINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEY
HHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
HNITSKLISDDLLVILPYTRSFKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEK
HHHHHHHHCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHH
DLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESELEDIQKLIDDQMRAVVLGTSA
HHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECHH
IINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLI
HHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHH
PLLVFAVGIVIYLRRRHL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEK
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH
TIKVLKNLDQEVKVTGFFKPGSNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYN
HHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEC
VTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEEFTRALIDVTKNTTASVYFIT
CEEEEEEEEECHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
GHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELIN
CCCCCHHHHHHHHHHHHHCCCCEEECCEEHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH
KFINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEY
HHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
HNITSKLISDDLLVILPYTRSFKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEK
HHHHHHHHCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHH
DLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESELEDIQKLIDDQMRAVVLGTSA
HHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECHH
IINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLI
HHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHH
PLLVFAVGIVIYLRRRHL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA