| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is gpr [H]
Identifier: 220932123
GI number: 220932123
Start: 1381124
End: 1382137
Strand: Reverse
Name: gpr [H]
Synonym: Hore_12860
Alternate gene names: 220932123
Gene position: 1382137-1381124 (Counterclockwise)
Preceding gene: 220932124
Following gene: 220932122
Centisome position: 53.61
GC content: 42.41
Gene sequence:
>1014_bases ATGAAACCATATTTTAATAGTAACCCTTATAATAATGTAGAAGTGTATACAGACCTGGCGGTAGAAGCACATAATTTAGC TGTTAAAAGGACCGGGGGAGAGGTTCCTGGGGTCAGTGTTAGGGAGGAAATAGTTGAGAATGCTAAAATAACACGAATAG AGGTTTTAAATCAGCAGGGAGCAGAAGCCATTAATAAACCTGTTGGTACATATATTACCATAGAATCACAGGATTTGAGG GGTCAAAACAGGCTTGCCCATGATAAGCTAACAGATATATTTGCCACAGAACTGGGGAATCTTATCAATTTTGACGCCAT AAGACCCCATCCCAATCTGGAGCCTACCATTTTTGTAGTTGGGCTTGGAAACTGGAATGCTACCCCGGATGCTCTGGGGC CCCATGCCCTGAATTATTTGATGGTAACCAGACATCTCTACCAACAGGCTCCTCCAGAATTGAGAAAAGGATTAAGACCA GTCTGTGCACTGGCTCCCGGTGTACTGGGATTAACCGGTGTCCAGACAGCTGAGATAATAAAAGGTGTTGTCCAGCTGGT AAACCCTGATCTTATTATAGCCATTGATTCCCTGGCAGCCAGGAGTACAGACCGGCTGGCCCGGACCATTCAAATAAGTA ATACAGGAATATCACCAGGGTCTGGCCTCGGGAAAAAGAGACTGGCAATAAATCAGGAGACAATGAACATACCTGTAATC GCAATCGGGGTACCTACAGTGGTAAATGCAATAACTATTGTAAATGATGCTATGGAACAGCTAATACAGGGTGAATTATT TTCGCCTACCGAACGGGAAAGGTTTCGCCATATTGAGGAAGCTGAGAAAAAAAGGTTAATGGCAAATATTCTAAGCCCCT ATATGGGTGATTTAATTATGTCTCCTAAAGGTATAGATGAGTTAATCAAGGATGTTGGCCGAATAATTGGGGGAGGGGTT AATGTAGCCCTTCATCCTGATATTACTCCAGAAAATCTATCATTATATTTATAA
Upstream 100 bases:
>100_bases GGATTAAGCGTATCCATCTGGGGAGCATTACTGGCATCCCTGGTTATCGGGTTAATTGATGCTTTTGTCCCCACTGAATT AAGATAAGGAGAGTCCTACA
Downstream 100 bases:
>100_bases ATAAAAAATAATATTTATAGATAAAAATAAATTTTGCTTATTTATATATTGAGAGTATAATGTTATAACCGGACACTGGC CTGGTTTAAATTTTTACATT
Product: germination protease
Products: NA
Alternate protein names: GPR endopeptidase; Germination proteinase; Spore protease [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKPYFNSNPYNNVEVYTDLAVEAHNLAVKRTGGEVPGVSVREEIVENAKITRIEVLNQQGAEAINKPVGTYITIESQDLR GQNRLAHDKLTDIFATELGNLINFDAIRPHPNLEPTIFVVGLGNWNATPDALGPHALNYLMVTRHLYQQAPPELRKGLRP VCALAPGVLGLTGVQTAEIIKGVVQLVNPDLIIAIDSLAARSTDRLARTIQISNTGISPGSGLGKKRLAINQETMNIPVI AIGVPTVVNAITIVNDAMEQLIQGELFSPTERERFRHIEEAEKKRLMANILSPYMGDLIMSPKGIDELIKDVGRIIGGGV NVALHPDITPENLSLYL
Sequences:
>Translated_337_residues MKPYFNSNPYNNVEVYTDLAVEAHNLAVKRTGGEVPGVSVREEIVENAKITRIEVLNQQGAEAINKPVGTYITIESQDLR GQNRLAHDKLTDIFATELGNLINFDAIRPHPNLEPTIFVVGLGNWNATPDALGPHALNYLMVTRHLYQQAPPELRKGLRP VCALAPGVLGLTGVQTAEIIKGVVQLVNPDLIIAIDSLAARSTDRLARTIQISNTGISPGSGLGKKRLAINQETMNIPVI AIGVPTVVNAITIVNDAMEQLIQGELFSPTERERFRHIEEAEKKRLMANILSPYMGDLIMSPKGIDELIKDVGRIIGGGV NVALHPDITPENLSLYL >Mature_337_residues MKPYFNSNPYNNVEVYTDLAVEAHNLAVKRTGGEVPGVSVREEIVENAKITRIEVLNQQGAEAINKPVGTYITIESQDLR GQNRLAHDKLTDIFATELGNLINFDAIRPHPNLEPTIFVVGLGNWNATPDALGPHALNYLMVTRHLYQQAPPELRKGLRP VCALAPGVLGLTGVQTAEIIKGVVQLVNPDLIIAIDSLAARSTDRLARTIQISNTGISPGSGLGKKRLAINQETMNIPVI AIGVPTVVNAITIVNDAMEQLIQGELFSPTERERFRHIEEAEKKRLMANILSPYMGDLIMSPKGIDELIKDVGRIIGGGV NVALHPDITPENLSLYL
Specific function: Initiates the rapid degradation of small, acid-soluble proteins during spore germination [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase A25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005080 - InterPro: IPR000671 - ProDom: PD041835 [H]
Pfam domain/function: PF03418 Peptidase_A25 [H]
EC number: =3.4.24.78 [H]
Molecular weight: Translated: 36744; Mature: 36744
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYFNSNPYNNVEVYTDLAVEAHNLAVKRTGGEVPGVSVREEIVENAKITRIEVLNQQG CCCCCCCCCCCCEEEEEEEEEEHHHEEEEECCCCCCCCHHHHHHHCCCCEEHEEHHHHHC AEAINKPVGTYITIESQDLRGQNRLAHDKLTDIFATELGNLINFDAIRPHPNLEPTIFVV HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE GLGNWNATPDALGPHALNYLMVTRHLYQQAPPELRKGLRPVCALAPGVLGLTGVQTAEII ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCCHHCCCCCCHHHHH KGVVQLVNPDLIIAIDSLAARSTDRLARTIQISNTGISPGSGLGKKRLAINQETMNIPVI HHHHHHHCCCEEEEEHHHHHCCHHHHHEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEE AIGVPTVVNAITIVNDAMEQLIQGELFSPTERERFRHIEEAEKKRLMANILSPYMGDLIM EECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPKGIDELIKDVGRIIGGGVNVALHPDITPENLSLYL CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEC >Mature Secondary Structure MKPYFNSNPYNNVEVYTDLAVEAHNLAVKRTGGEVPGVSVREEIVENAKITRIEVLNQQG CCCCCCCCCCCCEEEEEEEEEEHHHEEEEECCCCCCCCHHHHHHHCCCCEEHEEHHHHHC AEAINKPVGTYITIESQDLRGQNRLAHDKLTDIFATELGNLINFDAIRPHPNLEPTIFVV HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE GLGNWNATPDALGPHALNYLMVTRHLYQQAPPELRKGLRPVCALAPGVLGLTGVQTAEII ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCCHHCCCCCCHHHHH KGVVQLVNPDLIIAIDSLAARSTDRLARTIQISNTGISPGSGLGKKRLAINQETMNIPVI HHHHHHHCCCEEEEEHHHHHCCHHHHHEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEE AIGVPTVVNAITIVNDAMEQLIQGELFSPTERERFRHIEEAEKKRLMANILSPYMGDLIM EECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPKGIDELIKDVGRIIGGGVNVALHPDITPENLSLYL CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA