Click here to switch to the map view.

The map label for this gene is 220932102

Identifier: 220932102

GI number: 220932102

Start: 1357857

End: 1358597

Strand: Reverse

Name: 220932102

Synonym: Hore_12650

Alternate gene names: NA

Gene position: 1358597-1357857 (Counterclockwise)

Preceding gene: 220932103

Following gene: 220932101

Centisome position: 52.7

GC content: 29.69

Gene sequence:

>741_bases
ATGATAGATAGCAGGGTTTTTGTTGTTGCTTTAAGTTTCCTGATAATATTACTGGCTGGACTCCCTGTCCAGGCCAGTGG
TAAGATAGAATATAAGCAAGATTCTAATCAAATAAATAATAATACAGAAGTTAGTGTAAATCAGGAAAATGTACTATATA
TATTGAAATTTGTTGAATTTAATAACCAATCTGAACAGAATATTGATATCAGTGTTAATATCAATAAAAAAATTTCTGAT
AAAGGCTGGGTAATTATATCTGACCCGGAATTAATGGAATTAATGGGAGTAAATCATATAATTAATGTAAATAATTCTGA
GGTTCATCGCTTTTATTATCAAGATATTTACCTGGTTACCCTTGAAGACAGACCAGTAGTGTTTAAAATAGAAGACATAA
ATCATGGTATGATTAATACTAAAGAAAATACCGTTAAAATAAAACTTGTCCCTGAACAATTAATTACTTCACAAAAAAAG
ATAATAACCGAAATATATTTTTCAATACAGTATAGAGATATGGTTTCTAGAATTAAAACTATTAAATCCTTAACTCCGAC
AACCAGAAGACCCGTTTTTTTAATGGTTAAGAGGGAGGATAATGATTCATTAAAATTTGTAGTCCTGTATGCAACAGCTA
AAATGATTGAAGTAGGCAGAATAACCGATAAATCGACTGTACTTCTCGGGAATGTCTCCACATTGAACAATATTTTTACA
GAAGAAAAAAACCTTCTGTAA

Upstream 100 bases:

>100_bases
TCCTTTATTAAGATGGCTTTTTACCAAAAAAGTAAATGATACCGGAGATAGAGAATTATTAATATTTGTGACTCCAACAA
TTAAGTAGGAGGACAGTTAT

Downstream 100 bases:

>100_bases
AGTTTCTAAATAAAAGAGAATTAAATATATTTTTTAACAGTGATGATGTTATAATCGATGTAGAGCGGGGAGGTAACAGA
AGAATTTATGGGTCAGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MIDSRVFVVALSFLIILLAGLPVQASGKIEYKQDSNQINNNTEVSVNQENVLYILKFVEFNNQSEQNIDISVNINKKISD
KGWVIISDPELMELMGVNHIINVNNSEVHRFYYQDIYLVTLEDRPVVFKIEDINHGMINTKENTVKIKLVPEQLITSQKK
IITEIYFSIQYRDMVSRIKTIKSLTPTTRRPVFLMVKREDNDSLKFVVLYATAKMIEVGRITDKSTVLLGNVSTLNNIFT
EEKNLL

Sequences:

>Translated_246_residues
MIDSRVFVVALSFLIILLAGLPVQASGKIEYKQDSNQINNNTEVSVNQENVLYILKFVEFNNQSEQNIDISVNINKKISD
KGWVIISDPELMELMGVNHIINVNNSEVHRFYYQDIYLVTLEDRPVVFKIEDINHGMINTKENTVKIKLVPEQLITSQKK
IITEIYFSIQYRDMVSRIKTIKSLTPTTRRPVFLMVKREDNDSLKFVVLYATAKMIEVGRITDKSTVLLGNVSTLNNIFT
EEKNLL
>Mature_246_residues
MIDSRVFVVALSFLIILLAGLPVQASGKIEYKQDSNQINNNTEVSVNQENVLYILKFVEFNNQSEQNIDISVNINKKISD
KGWVIISDPELMELMGVNHIINVNNSEVHRFYYQDIYLVTLEDRPVVFKIEDINHGMINTKENTVKIKLVPEQLITSQKK
IITEIYFSIQYRDMVSRIKTIKSLTPTTRRPVFLMVKREDNDSLKFVVLYATAKMIEVGRITDKSTVLLGNVSTLNNIFT
EEKNLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28317; Mature: 28317

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSRVFVVALSFLIILLAGLPVQASGKIEYKQDSNQINNNTEVSVNQENVLYILKFVEF
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEC
NNQSEQNIDISVNINKKISDKGWVIISDPELMELMGVNHIINVNNSEVHRFYYQDIYLVT
CCCCCCCEEEEEEECCEECCCCEEEECCCHHHHHHCCCEEEECCCCCEEEEEEEEEEEEE
LEDRPVVFKIEDINHGMINTKENTVKIKLVPEQLITSQKKIITEIYFSIQYRDMVSRIKT
ECCCCEEEEEECCCCCEEECCCCEEEEEEECHHHHHHHHHHEEHHHEEEEHHHHHHHHHH
IKSLTPTTRRPVFLMVKREDNDSLKFVVLYATAKMIEVGRITDKSTVLLGNVSTLNNIFT
HHHCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCEEEEECHHHHHHHHH
EEKNLL
HHCCCC
>Mature Secondary Structure
MIDSRVFVVALSFLIILLAGLPVQASGKIEYKQDSNQINNNTEVSVNQENVLYILKFVEF
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEC
NNQSEQNIDISVNINKKISDKGWVIISDPELMELMGVNHIINVNNSEVHRFYYQDIYLVT
CCCCCCCEEEEEEECCEECCCCEEEECCCHHHHHHCCCEEEECCCCCEEEEEEEEEEEEE
LEDRPVVFKIEDINHGMINTKENTVKIKLVPEQLITSQKKIITEIYFSIQYRDMVSRIKT
ECCCCEEEEEECCCCCEEECCCCEEEEEEECHHHHHHHHHHEEHHHEEEEHHHHHHHHHH
IKSLTPTTRRPVFLMVKREDNDSLKFVVLYATAKMIEVGRITDKSTVLLGNVSTLNNIFT
HHHCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCEEEEECHHHHHHHHH
EEKNLL
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA