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The map label for this gene is yqfO [H]

Identifier: 220932076

GI number: 220932076

Start: 1331908

End: 1333026

Strand: Reverse

Name: yqfO [H]

Synonym: Hore_12390

Alternate gene names: 220932076

Gene position: 1333026-1331908 (Counterclockwise)

Preceding gene: 220932077

Following gene: 220932075

Centisome position: 51.7

GC content: 36.55

Gene sequence:

>1119_bases
ATGGTAAGGTTATCAAATATTGTAGGAGTAATGAATGAAATTGCTCCCCGTTTCCTGGCCATGGACTGGGATAATCCTGG
ACTACAGATTGGGTATTTTAGTCAGGAGATTAATAGAGTATTAGTTACATTAGATGTTACTGAGGAAGTGGTAGAGGAAG
CCATAGAGGAAAACTGTCAGTTGATTATTTCCCATCATCCCCTGTTATTTAAAGGATTAAAATCAATTCACGACAAAAGT
TATAATGGGAGAGTAGTTTTGAAGGCAATAAAAAATAATATAGCTGTTCTTTCCGCCCATACTAATTTCGATATAGTAGG
TTCAGGTATTAATGATTACCTGTCTCATCTACTAGGTTTATCTGATATTCAACCACTTAAAGTAACCGGTGAAAAACCCT
ATATAAAATTAGTAGTATTTATTCCGGAAAGTCATTTTGATGTTGTCAGGAAGGAAATACTTGATAGTGGTTTAGCAGGA
TTTATTGGTAACTATAGCCATACCTCGTTTTCGGTGAAGGGAGAGGGAACTTTTAAACCCCTGGAAGGGAGTAATCCTTT
TACAGGTCAAAAAGGGCACCTGGCCAGGGTCGAGGAATTGAGGCTAGAAACTATTATACCGGCTAACAATATTAGTAAAG
TTATTGATATTATAAAAAAAGTTCATCCCTATGAAGAGGTTGCCTATGATCTATATCCCCTGAATAATACCGGAGAGAAA
TATGGACTGGGCAGGATAGGCCTTTTGGAAAAGGGTATTAAACTTGTTGATTTTGTTGATATTGTAAAAGAAAAACTTGG
TATCAGACATATTCGTTATACTGGTAATTATGATAATATTGTTAAGAGGATCGCTGTTTGTAGTGGGAGTGGAGGGGATC
TCATTAGAGAAGCCAGAAATAAAAGGGCAGACTTATATATAACAGGTGATATTAAATATCATGATGCCCAGCTGGCCAGT
GAACTGGGGCTGGCTGTAGTTGATGCTGGTCATTATGGTACTGAAAAACATGTTAAAAGCTTACTGGTAGGTTTATTAAC
AGATAAATTTAAAGAGAATGGGTTTAAAGTTGGTGTCTGCAAGTCCCGTATTAATACTAACCCGTGGCTTTATAAATAA

Upstream 100 bases:

>100_bases
ATTTGACAAAAAAGAAATCAGGCAATAAAATTAAGTGATAGGAAAATAATATGAACTTTATTTTTCAAAAGAGAATATAA
TGAGAGGAAAGGGGTTTTTT

Downstream 100 bases:

>100_bases
GTAAGCAGGAAGAAGTAGGCAGGGGAGGGATATACTATGGTATTTATATTTCATACCTGTATTAACTGTGGGAAAAGAAT
AATTCCTGAAAGGCTTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MVRLSNIVGVMNEIAPRFLAMDWDNPGLQIGYFSQEINRVLVTLDVTEEVVEEAIEENCQLIISHHPLLFKGLKSIHDKS
YNGRVVLKAIKNNIAVLSAHTNFDIVGSGINDYLSHLLGLSDIQPLKVTGEKPYIKLVVFIPESHFDVVRKEILDSGLAG
FIGNYSHTSFSVKGEGTFKPLEGSNPFTGQKGHLARVEELRLETIIPANNISKVIDIIKKVHPYEEVAYDLYPLNNTGEK
YGLGRIGLLEKGIKLVDFVDIVKEKLGIRHIRYTGNYDNIVKRIAVCSGSGGDLIREARNKRADLYITGDIKYHDAQLAS
ELGLAVVDAGHYGTEKHVKSLLVGLLTDKFKENGFKVGVCKSRINTNPWLYK

Sequences:

>Translated_372_residues
MVRLSNIVGVMNEIAPRFLAMDWDNPGLQIGYFSQEINRVLVTLDVTEEVVEEAIEENCQLIISHHPLLFKGLKSIHDKS
YNGRVVLKAIKNNIAVLSAHTNFDIVGSGINDYLSHLLGLSDIQPLKVTGEKPYIKLVVFIPESHFDVVRKEILDSGLAG
FIGNYSHTSFSVKGEGTFKPLEGSNPFTGQKGHLARVEELRLETIIPANNISKVIDIIKKVHPYEEVAYDLYPLNNTGEK
YGLGRIGLLEKGIKLVDFVDIVKEKLGIRHIRYTGNYDNIVKRIAVCSGSGGDLIREARNKRADLYITGDIKYHDAQLAS
ELGLAVVDAGHYGTEKHVKSLLVGLLTDKFKENGFKVGVCKSRINTNPWLYK
>Mature_372_residues
MVRLSNIVGVMNEIAPRFLAMDWDNPGLQIGYFSQEINRVLVTLDVTEEVVEEAIEENCQLIISHHPLLFKGLKSIHDKS
YNGRVVLKAIKNNIAVLSAHTNFDIVGSGINDYLSHLLGLSDIQPLKVTGEKPYIKLVVFIPESHFDVVRKEILDSGLAG
FIGNYSHTSFSVKGEGTFKPLEGSNPFTGQKGHLARVEELRLETIIPANNISKVIDIIKKVHPYEEVAYDLYPLNNTGEK
YGLGRIGLLEKGIKLVDFVDIVKEKLGIRHIRYTGNYDNIVKRIAVCSGSGGDLIREARNKRADLYITGDIKYHDAQLAS
ELGLAVVDAGHYGTEKHVKSLLVGLLTDKFKENGFKVGVCKSRINTNPWLYK

Specific function: Unknown

COG id: COG3323

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI209862879, Length=380, Percent_Identity=27.1052631578947, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI215272360, Length=380, Percent_Identity=27.1052631578947, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI56605983, Length=380, Percent_Identity=27.1052631578947, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI215272362, Length=124, Percent_Identity=32.258064516129, Blast_Score=86, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6321217, Length=122, Percent_Identity=27.8688524590164, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19921430, Length=126, Percent_Identity=39.6825396825397, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 41437; Mature: 41437

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLSNIVGVMNEIAPRFLAMDWDNPGLQIGYFSQEINRVLVTLDVTEEVVEEAIEENCQ
CEEHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHCCCEEEEEEECHHHHHHHHHHCCCE
LIISHHPLLFKGLKSIHDKSYNGRVVLKAIKNNIAVLSAHTNFDIVGSGINDYLSHLLGL
EEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCEEEECCHHHHHHHHHCC
SDIQPLKVTGEKPYIKLVVFIPESHFDVVRKEILDSGLAGFIGNYSHTSFSVKGEGTFKP
CCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCCCC
LEGSNPFTGQKGHLARVEELRLETIIPANNISKVIDIIKKVHPYEEVAYDLYPLNNTGEK
CCCCCCCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCCCC
YGLGRIGLLEKGIKLVDFVDIVKEKLGIRHIRYTGNYDNIVKRIAVCSGSGGDLIREARN
CCCCCHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHC
KRADLYITGDIKYHDAQLASELGLAVVDAGHYGTEKHVKSLLVGLLTDKFKENGFKVGVC
CCCEEEEEECEEECHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
KSRINTNPWLYK
HHCCCCCCCCCC
>Mature Secondary Structure
MVRLSNIVGVMNEIAPRFLAMDWDNPGLQIGYFSQEINRVLVTLDVTEEVVEEAIEENCQ
CEEHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHCCCEEEEEEECHHHHHHHHHHCCCE
LIISHHPLLFKGLKSIHDKSYNGRVVLKAIKNNIAVLSAHTNFDIVGSGINDYLSHLLGL
EEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCEEEECCHHHHHHHHHCC
SDIQPLKVTGEKPYIKLVVFIPESHFDVVRKEILDSGLAGFIGNYSHTSFSVKGEGTFKP
CCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCCCC
LEGSNPFTGQKGHLARVEELRLETIIPANNISKVIDIIKKVHPYEEVAYDLYPLNNTGEK
CCCCCCCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCCCC
YGLGRIGLLEKGIKLVDFVDIVKEKLGIRHIRYTGNYDNIVKRIAVCSGSGGDLIREARN
CCCCCHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHC
KRADLYITGDIKYHDAQLASELGLAVVDAGHYGTEKHVKSLLVGLLTDKFKENGFKVGVC
CCCEEEEEECEEECHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
KSRINTNPWLYK
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]