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The map label for this gene is yebC [C]

Identifier: 220932072

GI number: 220932072

Start: 1327928

End: 1328689

Strand: Reverse

Name: yebC [C]

Synonym: Hore_12350

Alternate gene names: 220932072

Gene position: 1328689-1327928 (Counterclockwise)

Preceding gene: 220932073

Following gene: 220932071

Centisome position: 51.54

GC content: 38.06

Gene sequence:

>762_bases
ATGGCAGGACATTCTAAATGGGCCAATATTAAGCATAAAAAGGCAAAAGAAGACCGAAAACGTGGTAAATTATTTTCGAA
ATTGAGTAAGATGATAACAGTGGCCGCCCGCGAGGGTGGGGGAGACCCTGAAATGAATCCTGACCTCCGGTTAGCGATTC
AAAAGGCAAAAGATAATAATATGCCCAATGATAATATAGAGAGAGCAATAAAAAGGGGAACCGGGGAATTAGAAGGAGTA
AAATATGAAAAATTTGTTTATGAAGGCTATGGTCCCGGGGGTGTTGCTCTCTATTTAGAACTTATGAGTGATAACAGAAA
TAGAACTGCTGCTGAAATAAGACATGTTTTATCAAAAAATGGTGGTAATCTAGGAGAATCAGGTTGTGTTTCCTGGATGT
TTAAGAGAAGAGGGCAGCTGATTGTTGACTTAAATGAGAGTGATTTTGATGAAGATGAGTTAATGCTTGAAGCCCTTGAA
GCCGGTGCTGAAGATGTTGTTACAGAAGATAACCTGTTAACTATCTATACTGATCCTTCTGATTTTGAAGAAGTCAGGAA
ACAACTTGAGGAACAGGGAATTAAATTTTCTTCAGCAGATATAGCTATGGTGCCTGAAAACAACGTAAATGTAGATGATA
AATCAACGGCAAAAAAAGTCCTGAAGTTAATGGATGCCCTGGAAGACCATGACGATGTTCAGGAAGTGTATTCTAATTTT
GATATACCTGATGAAATAATGGAAGAGATTACTGAAGAATAG

Upstream 100 bases:

>100_bases
CCTTTTTATAAAATTAATTTCCCCGTTAGATTACAGTAACATTGAAAAGTTAGAGAAAGTATGTTAAAATAAATTGCACA
TTATTTTAAGGAGGGGTTTT

Downstream 100 bases:

>100_bases
AGACACTGATTTAACTCAGTGTCTTTTGTATATTTTTTGGTTTACTGGGTATAATAAGCCAAAAAATATACAGGAGATGG
GGTTAAATGTTGTTATTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAGHSKWANIKHKKAKEDRKRGKLFSKLSKMITVAAREGGGDPEMNPDLRLAIQKAKDNNMPNDNIERAIKRGTGELEGV
KYEKFVYEGYGPGGVALYLELMSDNRNRTAAEIRHVLSKNGGNLGESGCVSWMFKRRGQLIVDLNESDFDEDELMLEALE
AGAEDVVTEDNLLTIYTDPSDFEEVRKQLEEQGIKFSSADIAMVPENNVNVDDKSTAKKVLKLMDALEDHDDVQEVYSNF
DIPDEIMEEITEE

Sequences:

>Translated_253_residues
MAGHSKWANIKHKKAKEDRKRGKLFSKLSKMITVAAREGGGDPEMNPDLRLAIQKAKDNNMPNDNIERAIKRGTGELEGV
KYEKFVYEGYGPGGVALYLELMSDNRNRTAAEIRHVLSKNGGNLGESGCVSWMFKRRGQLIVDLNESDFDEDELMLEALE
AGAEDVVTEDNLLTIYTDPSDFEEVRKQLEEQGIKFSSADIAMVPENNVNVDDKSTAKKVLKLMDALEDHDDVQEVYSNF
DIPDEIMEEITEE
>Mature_252_residues
AGHSKWANIKHKKAKEDRKRGKLFSKLSKMITVAAREGGGDPEMNPDLRLAIQKAKDNNMPNDNIERAIKRGTGELEGVK
YEKFVYEGYGPGGVALYLELMSDNRNRTAAEIRHVLSKNGGNLGESGCVSWMFKRRGQLIVDLNESDFDEDELMLEALEA
GAEDVVTEDNLLTIYTDPSDFEEVRKQLEEQGIKFSSADIAMVPENNVNVDDKSTAKKVLKLMDALEDHDDVQEVYSNFD
IPDEIMEEITEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=250, Percent_Identity=34.4, Blast_Score=144, Evalue=1e-34,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=50.2024291497976, Blast_Score=251, Evalue=3e-68,
Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=36.9747899159664, Blast_Score=147, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17556100, Length=250, Percent_Identity=25.6, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=32.319391634981, Blast_Score=117, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24583305, Length=218, Percent_Identity=29.8165137614679, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1235_HALOH (B8CXG6)

Other databases:

- EMBL:   CP001098
- RefSeq:   YP_002508980.1
- ProteinModelPortal:   B8CXG6
- SMR:   B8CXG6
- GeneID:   7313936
- GenomeReviews:   CP001098_GR
- KEGG:   hor:Hore_12350
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 28462; Mature: 28331

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHKKAKEDRKRGKLFSKLSKMITVAAREGGGDPEMNPDLRLAIQKAKDNN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEHHHCCC
MPNDNIERAIKRGTGELEGVKYEKFVYEGYGPGGVALYLELMSDNRNRTAAEIRHVLSKN
CCCHHHHHHHHHCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
GGNLGESGCVSWMFKRRGQLIVDLNESDFDEDELMLEALEAGAEDVVTEDNLLTIYTDPS
CCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEEECCC
DFEEVRKQLEEQGIKFSSADIAMVPENNVNVDDKSTAKKVLKLMDALEDHDDVQEVYSNF
CHHHHHHHHHHCCCEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
DIPDEIMEEITEE
CCCHHHHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKHKKAKEDRKRGKLFSKLSKMITVAAREGGGDPEMNPDLRLAIQKAKDNN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEHHHCCC
MPNDNIERAIKRGTGELEGVKYEKFVYEGYGPGGVALYLELMSDNRNRTAAEIRHVLSKN
CCCHHHHHHHHHCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
GGNLGESGCVSWMFKRRGQLIVDLNESDFDEDELMLEALEAGAEDVVTEDNLLTIYTDPS
CCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEEECCC
DFEEVRKQLEEQGIKFSSADIAMVPENNVNVDDKSTAKKVLKLMDALEDHDDVQEVYSNF
CHHHHHHHHHHCCCEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
DIPDEIMEEITEE
CCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA