Click here to switch to the map view.

The map label for this gene is 220932016

Identifier: 220932016

GI number: 220932016

Start: 1276239

End: 1277183

Strand: Reverse

Name: 220932016

Synonym: Hore_11790

Alternate gene names: NA

Gene position: 1277183-1276239 (Counterclockwise)

Preceding gene: 220932017

Following gene: 220932015

Centisome position: 49.54

GC content: 32.49

Gene sequence:

>945_bases
ATGTATTATAGAAAAGATTCCAGTCGTTTTATGTTTTATATTATTATTTCATCCCTAATCCACTTAGGGATTATTATGTT
TTTTACAATGGGAAATTATAGTGTTCTTGGTGGAAAAGGGGAAACAAGGCATGATTTTGAATTTGTACAGGTTGTAGAAT
TTAAAAATGAAGTAAGACATGTAAAACCTGAAACAACCATTAAGCCAGAGAGAAAAGATAACAGGCAGGAGAAACCAGCA
AAGGATGAAAATATAGAAAATAATGAAAAAATAGCAGAGACAGAAACTGAAGAACAACCCGTAAATAATAAAACCAGTGA
AAGCAAGTCACGTGAAGAAAATTCCATTACTGATAAGAACTCTGTTAAGGATAATCATAATAAGAATCCTGAGAAGACTG
ATATTGATGATAATGTAAAACAACAAAACGAAGTAAAAGATAGTATAGATAGTCCTGAAACCAGGAATGATAAAAGCTCT
AAAGGTAATAAAAATAATGAAATAATCTCCAGTGAGAAAAGTGATATGGAAGTAAAGGTTAATGAGGAAAACAGTTCAGG
AAAAAAATCAAATTCTAGAGCAGAATCGGAAAATACTGAATCTGAAAAAAGTAAGCCCGAACCACCCCCTCCACCTACTG
CTGGTGATCTAATTGCCTTTTCTCCACAACCTTATTACCCTAAAGATCTGGTCAGTCAGGCCCTGTCAGGTGTAGTAGAA
CTGGAAGTATCAATTTCTACAAATGGTGAAATAGAAAATGTTGTCTTATCAAAATCATCAGGTATAGAACAAATGGACAG
GAATGCTCAATTAACTATTAAAAGGGGCTGGAAATTTAACCCCTATAAAAAGCCTTATACAATTAAGGTTATGATTGAAT
ACAAAGTTGATGAAAAGGGTAATTCTTCAGTTAATGTAAAATTAGGAGAATTAGTATTTAAGTAG

Upstream 100 bases:

>100_bases
AGGATACCAAATACCGTTACATAGTACAGGTTATGGATAATTTACGCCAGGTAGGAATTTATAAGCTGGCACTTGCTGCC
GAAAAAGAGGGGTAATCTAA

Downstream 100 bases:

>100_bases
TGGTGCCAATCAGGGGGGAGGTATTTAATATAATGAATAATATAAAAAAATTACTCAGGTTTATGATATTTACAATTTTA
GTGTTTACCTTTCCCTGTAC

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MYYRKDSSRFMFYIIISSLIHLGIIMFFTMGNYSVLGGKGETRHDFEFVQVVEFKNEVRHVKPETTIKPERKDNRQEKPA
KDENIENNEKIAETETEEQPVNNKTSESKSREENSITDKNSVKDNHNKNPEKTDIDDNVKQQNEVKDSIDSPETRNDKSS
KGNKNNEIISSEKSDMEVKVNEENSSGKKSNSRAESENTESEKSKPEPPPPPTAGDLIAFSPQPYYPKDLVSQALSGVVE
LEVSISTNGEIENVVLSKSSGIEQMDRNAQLTIKRGWKFNPYKKPYTIKVMIEYKVDEKGNSSVNVKLGELVFK

Sequences:

>Translated_314_residues
MYYRKDSSRFMFYIIISSLIHLGIIMFFTMGNYSVLGGKGETRHDFEFVQVVEFKNEVRHVKPETTIKPERKDNRQEKPA
KDENIENNEKIAETETEEQPVNNKTSESKSREENSITDKNSVKDNHNKNPEKTDIDDNVKQQNEVKDSIDSPETRNDKSS
KGNKNNEIISSEKSDMEVKVNEENSSGKKSNSRAESENTESEKSKPEPPPPPTAGDLIAFSPQPYYPKDLVSQALSGVVE
LEVSISTNGEIENVVLSKSSGIEQMDRNAQLTIKRGWKFNPYKKPYTIKVMIEYKVDEKGNSSVNVKLGELVFK
>Mature_314_residues
MYYRKDSSRFMFYIIISSLIHLGIIMFFTMGNYSVLGGKGETRHDFEFVQVVEFKNEVRHVKPETTIKPERKDNRQEKPA
KDENIENNEKIAETETEEQPVNNKTSESKSREENSITDKNSVKDNHNKNPEKTDIDDNVKQQNEVKDSIDSPETRNDKSS
KGNKNNEIISSEKSDMEVKVNEENSSGKKSNSRAESENTESEKSKPEPPPPPTAGDLIAFSPQPYYPKDLVSQALSGVVE
LEVSISTNGEIENVVLSKSSGIEQMDRNAQLTIKRGWKFNPYKKPYTIKVMIEYKVDEKGNSSVNVKLGELVFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35723; Mature: 35723

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYRKDSSRFMFYIIISSLIHLGIIMFFTMGNYSVLGGKGETRHDFEFVQVVEFKNEVRH
CCEECCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
VKPETTIKPERKDNRQEKPAKDENIENNEKIAETETEEQPVNNKTSESKSREENSITDKN
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCC
SVKDNHNKNPEKTDIDDNVKQQNEVKDSIDSPETRNDKSSKGNKNNEIISSEKSDMEVKV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEE
NEENSSGKKSNSRAESENTESEKSKPEPPPPPTAGDLIAFSPQPYYPKDLVSQALSGVVE
ECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCEEE
LEVSISTNGEIENVVLSKSSGIEQMDRNAQLTIKRGWKFNPYKKPYTIKVMIEYKVDEKG
EEEEECCCCCEEEEEEECCCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCC
NSSVNVKLGELVFK
CCEEEEEHHCEECC
>Mature Secondary Structure
MYYRKDSSRFMFYIIISSLIHLGIIMFFTMGNYSVLGGKGETRHDFEFVQVVEFKNEVRH
CCEECCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
VKPETTIKPERKDNRQEKPAKDENIENNEKIAETETEEQPVNNKTSESKSREENSITDKN
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCC
SVKDNHNKNPEKTDIDDNVKQQNEVKDSIDSPETRNDKSSKGNKNNEIISSEKSDMEVKV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEE
NEENSSGKKSNSRAESENTESEKSKPEPPPPPTAGDLIAFSPQPYYPKDLVSQALSGVVE
ECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCEEE
LEVSISTNGEIENVVLSKSSGIEQMDRNAQLTIKRGWKFNPYKKPYTIKVMIEYKVDEKG
EEEEECCCCCEEEEEEECCCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCC
NSSVNVKLGELVFK
CCEEEEEHHCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA