Click here to switch to the map view.

The map label for this gene is yrbE [H]

Identifier: 220931965

GI number: 220931965

Start: 1220466

End: 1221515

Strand: Reverse

Name: yrbE [H]

Synonym: Hore_11260

Alternate gene names: 220931965

Gene position: 1221515-1220466 (Counterclockwise)

Preceding gene: 220931971

Following gene: 220931964

Centisome position: 47.38

GC content: 38.67

Gene sequence:

>1050_bases
ATGAAAAAATTAAGGATGGGAATCATCGGAGCAGGAATGGCCTTTGAACGCCTTCATTATCCTGCCTACCGGAAACTGAC
TGATAAATTTGAAATAGTGGCCATAGCTGATAAGAATACTGACAGATTAAAACAATGGAAAGAAAAACTGGGTTTAAATG
AAAGGGATATTTACAGGGATTTTAGAGATATGATCACACGACCTGACCTTGACGCTTTTGATATCATGGTACCAATTGAA
ATCAACTATGAAACCACTGAGGCAGTAGCAGAAGCCGGAAAGCCAATTATCTGTGAAAAACCACTGGGAGCAACCAGAGA
ACAGATTGAGGCTGCCCGGAACCTGGTTGACAGGTATGAAATACCCATTATGATTGCTGAAAATTTCAGGTATAATGAGG
AAAACAATATAATCAGGGATCTAATAAGAACAAAAGAAATTGGTGAAGTCCATTATTTTATCCAAAACCGGGTAATTAAT
TTTCCTGAGGATATGTTAAAAAATAAATTTGCAGCAACCGAGTGGAGGCAACATCCCGAATACCCGGGCGGAACATTTAT
GGATACAGCCATACATGATATTGCAGCCCTACGACATATATTTGGAGCCATTGACCGGGTTCAGGCTATTGCCAGAAAGG
AAAAAAGGGATTTTTTCCCCTATTCAGTCATTCAGGCCAATATGATATTTAAAAATGGTGTCACCGGTAATTTTACCTTT
TTCACAGCAGGAAAGGAAATGCAGAGACCACTAATTGGCCTCAGAATATTCGGGAGTAAGGGTATGATTTACCTTGAAGA
ACGTAACTGTGGCACCATAAATATAGCCTATAATGATGGAAATAGTAAACAGATACCCTATAAACCGGAACAGGGTTTTT
ATAATGAACTTTTAAATTTTTATAAAGCAGTCACCGGCCAGGAACCCCTCTCAGTAACACCAGAAATGGAATTCGGTGAT
GCTCTGACCATCTTTTCTATTCTGGAATCTATCAAAACAGAAAAGGTCACCGGTGTTGACGAAATTAAAGAATATGAACC
TATCTATTAA

Upstream 100 bases:

>100_bases
ATTCTAACACCACCACCATGAAAGTTCAATTTAGACATCATGGATAACAACTACCTATTAAAACATACTATTAAAGAATA
CTAAAAAAAGGGGTGACTAT

Downstream 100 bases:

>100_bases
TATAACTCCATTAAAGTATACAGGAAGGCCTTCAGTGCCTTCTTTTTTATTAATATACATGACTTATCTTATTAAGTTAT
TTAATAATTTACACAAAACT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKKLRMGIIGAGMAFERLHYPAYRKLTDKFEIVAIADKNTDRLKQWKEKLGLNERDIYRDFRDMITRPDLDAFDIMVPIE
INYETTEAVAEAGKPIICEKPLGATREQIEAARNLVDRYEIPIMIAENFRYNEENNIIRDLIRTKEIGEVHYFIQNRVIN
FPEDMLKNKFAATEWRQHPEYPGGTFMDTAIHDIAALRHIFGAIDRVQAIARKEKRDFFPYSVIQANMIFKNGVTGNFTF
FTAGKEMQRPLIGLRIFGSKGMIYLEERNCGTINIAYNDGNSKQIPYKPEQGFYNELLNFYKAVTGQEPLSVTPEMEFGD
ALTIFSILESIKTEKVTGVDEIKEYEPIY

Sequences:

>Translated_349_residues
MKKLRMGIIGAGMAFERLHYPAYRKLTDKFEIVAIADKNTDRLKQWKEKLGLNERDIYRDFRDMITRPDLDAFDIMVPIE
INYETTEAVAEAGKPIICEKPLGATREQIEAARNLVDRYEIPIMIAENFRYNEENNIIRDLIRTKEIGEVHYFIQNRVIN
FPEDMLKNKFAATEWRQHPEYPGGTFMDTAIHDIAALRHIFGAIDRVQAIARKEKRDFFPYSVIQANMIFKNGVTGNFTF
FTAGKEMQRPLIGLRIFGSKGMIYLEERNCGTINIAYNDGNSKQIPYKPEQGFYNELLNFYKAVTGQEPLSVTPEMEFGD
ALTIFSILESIKTEKVTGVDEIKEYEPIY
>Mature_349_residues
MKKLRMGIIGAGMAFERLHYPAYRKLTDKFEIVAIADKNTDRLKQWKEKLGLNERDIYRDFRDMITRPDLDAFDIMVPIE
INYETTEAVAEAGKPIICEKPLGATREQIEAARNLVDRYEIPIMIAENFRYNEENNIIRDLIRTKEIGEVHYFIQNRVIN
FPEDMLKNKFAATEWRQHPEYPGGTFMDTAIHDIAALRHIFGAIDRVQAIARKEKRDFFPYSVIQANMIFKNGVTGNFTF
FTAGKEMQRPLIGLRIFGSKGMIYLEERNCGTINIAYNDGNSKQIPYKPEQGFYNELLNFYKAVTGQEPLSVTPEMEFGD
ALTIFSILESIKTEKVTGVDEIKEYEPIY

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323975, Length=319, Percent_Identity=26.3322884012539, Blast_Score=134, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40433; Mature: 40433

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLRMGIIGAGMAFERLHYPAYRKLTDKFEIVAIADKNTDRLKQWKEKLGLNERDIYRD
CCCCEEEEEECCHHHHHHCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHH
FRDMITRPDLDAFDIMVPIEINYETTEAVAEAGKPIICEKPLGATREQIEAARNLVDRYE
HHHHHCCCCCCCEEEEEEEEECCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHC
IPIMIAENFRYNEENNIIRDLIRTKEIGEVHYFIQNRVINFPEDMLKNKFAATEWRQHPE
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
YPGGTFMDTAIHDIAALRHIFGAIDRVQAIARKEKRDFFPYSVIQANMIFKNGVTGNFTF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCEEE
FTAGKEMQRPLIGLRIFGSKGMIYLEERNCGTINIAYNDGNSKQIPYKPEQGFYNELLNF
EECCHHHHCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
YKAVTGQEPLSVTPEMEFGDALTIFSILESIKTEKVTGVDEIKEYEPIY
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
>Mature Secondary Structure
MKKLRMGIIGAGMAFERLHYPAYRKLTDKFEIVAIADKNTDRLKQWKEKLGLNERDIYRD
CCCCEEEEEECCHHHHHHCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHH
FRDMITRPDLDAFDIMVPIEINYETTEAVAEAGKPIICEKPLGATREQIEAARNLVDRYE
HHHHHCCCCCCCEEEEEEEEECCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHC
IPIMIAENFRYNEENNIIRDLIRTKEIGEVHYFIQNRVINFPEDMLKNKFAATEWRQHPE
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
YPGGTFMDTAIHDIAALRHIFGAIDRVQAIARKEKRDFFPYSVIQANMIFKNGVTGNFTF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCEEE
FTAGKEMQRPLIGLRIFGSKGMIYLEERNCGTINIAYNDGNSKQIPYKPEQGFYNELLNF
EECCHHHHCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
YKAVTGQEPLSVTPEMEFGDALTIFSILESIKTEKVTGVDEIKEYEPIY
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]