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The map label for this gene is rsgA [H]

Identifier: 220931840

GI number: 220931840

Start: 1088232

End: 1089080

Strand: Direct

Name: rsgA [H]

Synonym: Hore_09970

Alternate gene names: 220931840

Gene position: 1088232-1089080 (Clockwise)

Preceding gene: 220931839

Following gene: 220931841

Centisome position: 42.21

GC content: 38.63

Gene sequence:

>849_bases
ATGAAAGGACTGGTAACAAAAGCCGTTGGCGGGTTTTTCTTTGTAGCTGATGAACAACAGAATATAATAAGAACCAGAAT
ACGTGGTAAGGTAAAAAGGAAAGTATATCCAGGGGATTTTGTAAAAGTGAATGATGCCATGATAGAAAAGCTTTATCCAA
GAACAAATTTGCTATTTCGACCTGCGGTAGCCAACGTTGACCAGGTACTTGTTATTCATTCTATTCAAAATCCTCCCTTT
GCCCGTAAAATGCTGGATAAATTTCTAATTATGGTTGAAGCTATTGGAGTTAAACCAGTTATTATCATTAACAAGATTGA
CCTGAAGGTTCCGGATATTGAGCTTGAAAAAGAGATGAAGGATTATAAAGAAGAGGGTTATCAGGTTTATTTAATTAGTG
TTAAAGAGAAGATGGGATTAAATGAATTATACCTTACTCTGGAGGAAAAGTTAAGTGTTCTGGCCGGTCCTTCTGGAGTT
GGCAAATCTTCATTAATCAAAGCACTGGTTCCAGAGGCCAGGGTCAAAATTGGGGAAGTAAGCCAGAAATTAAAAAGGGG
CGTTCATACTACCCGCCATGTAGAGTTATTACCAATAAATAAAGGGGGATGGATTGCCGATACACCCGGGTTTTCTGCCC
TTGATTTACGTGGTATTCTTAGTGAGAATTTGAGGTTTTATTTTCCTGGACTGGCCCGTTATGAGGGTCAATGTAAATTC
AGGGGATGTACCCATACCCATGAGCCTGGATGTCAGGTTAAGAAAGCGGTAAAGGAAGGTATGATTTCTGAAAAAAGGTA
TAATTCTTATCTGAATATATATCGAGATCTTGAAGAACGGGAGTGTTAG

Upstream 100 bases:

>100_bases
TATATAAATAGTGTCGGTACTACTACAATTGAGGTTTATTGTAATGGTGATTTGCTCGGCTGGGAAACAATAGATTGATA
AGTATCGAGAGGGGGGTTTG

Downstream 100 bases:

>100_bases
CATGGTAGAATTTGCGCCATCTATTTTATCAGCAGATTTTAGTAATTTAAAAGAGGAAGTTGCCAGGGTAAAAGAGGCCA
ATTATTTACATCTTGATGTT

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKGLVTKAVGGFFFVADEQQNIIRTRIRGKVKRKVYPGDFVKVNDAMIEKLYPRTNLLFRPAVANVDQVLVIHSIQNPPF
ARKMLDKFLIMVEAIGVKPVIIINKIDLKVPDIELEKEMKDYKEEGYQVYLISVKEKMGLNELYLTLEEKLSVLAGPSGV
GKSSLIKALVPEARVKIGEVSQKLKRGVHTTRHVELLPINKGGWIADTPGFSALDLRGILSENLRFYFPGLARYEGQCKF
RGCTHTHEPGCQVKKAVKEGMISEKRYNSYLNIYRDLEEREC

Sequences:

>Translated_282_residues
MKGLVTKAVGGFFFVADEQQNIIRTRIRGKVKRKVYPGDFVKVNDAMIEKLYPRTNLLFRPAVANVDQVLVIHSIQNPPF
ARKMLDKFLIMVEAIGVKPVIIINKIDLKVPDIELEKEMKDYKEEGYQVYLISVKEKMGLNELYLTLEEKLSVLAGPSGV
GKSSLIKALVPEARVKIGEVSQKLKRGVHTTRHVELLPINKGGWIADTPGFSALDLRGILSENLRFYFPGLARYEGQCKF
RGCTHTHEPGCQVKKAVKEGMISEKRYNSYLNIYRDLEEREC
>Mature_282_residues
MKGLVTKAVGGFFFVADEQQNIIRTRIRGKVKRKVYPGDFVKVNDAMIEKLYPRTNLLFRPAVANVDQVLVIHSIQNPPF
ARKMLDKFLIMVEAIGVKPVIIINKIDLKVPDIELEKEMKDYKEEGYQVYLISVKEKMGLNELYLTLEEKLSVLAGPSGV
GKSSLIKALVPEARVKIGEVSQKLKRGVHTTRHVELLPINKGGWIADTPGFSALDLRGILSENLRFYFPGLARYEGQCKF
RGCTHTHEPGCQVKKAVKEGMISEKRYNSYLNIYRDLEEREC

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=302, Percent_Identity=30.794701986755, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 32026; Mature: 32026

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLVTKAVGGFFFVADEQQNIIRTRIRGKVKRKVYPGDFVKVNDAMIEKLYPRTNLLFR
CCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCEEEC
PAVANVDQVLVIHSIQNPPFARKMLDKFLIMVEAIGVKPVIIINKIDLKVPDIELEKEMK
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHH
DYKEEGYQVYLISVKEKMGLNELYLTLEEKLSVLAGPSGVGKSSLIKALVPEARVKIGEV
HHHHCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHH
SQKLKRGVHTTRHVELLPINKGGWIADTPGFSALDLRGILSENLRFYFPGLARYEGQCKF
HHHHHHCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHCCCEEEECCHHCCCCCEEE
RGCTHTHEPGCQVKKAVKEGMISEKRYNSYLNIYRDLEEREC
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGLVTKAVGGFFFVADEQQNIIRTRIRGKVKRKVYPGDFVKVNDAMIEKLYPRTNLLFR
CCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCEEEC
PAVANVDQVLVIHSIQNPPFARKMLDKFLIMVEAIGVKPVIIINKIDLKVPDIELEKEMK
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHH
DYKEEGYQVYLISVKEKMGLNELYLTLEEKLSVLAGPSGVGKSSLIKALVPEARVKIGEV
HHHHCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHH
SQKLKRGVHTTRHVELLPINKGGWIADTPGFSALDLRGILSENLRFYFPGLARYEGQCKF
HHHHHHCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHCCCEEEECCHHCCCCCEEE
RGCTHTHEPGCQVKKAVKEGMISEKRYNSYLNIYRDLEEREC
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA