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The map label for this gene is rbsC [H]

Identifier: 220931799

GI number: 220931799

Start: 1032940

End: 1033908

Strand: Direct

Name: rbsC [H]

Synonym: Hore_09560

Alternate gene names: 220931799

Gene position: 1032940-1033908 (Clockwise)

Preceding gene: 220931798

Following gene: 220931800

Centisome position: 40.07

GC content: 33.64

Gene sequence:

>969_bases
GTGATTGATAATGGTGTCAATGAAACCCAAATGAGTTTTTTTAAGAGGTTTTCTGAGAAGATTATTCCTTTTACTGGATT
ATTGATAATTTGTATAATACTTTCTATTGCATCACCCTATTTTCTTACCTTAACTAATATTATGGCTATAGGTATTCAGA
CTACAGTTATTGCCATATTAGGTATAGGTGTTACGTTTGTAATAATTACTGCTGGAATAGATTTATCTGTGGGGTCAGTA
CTAGGATTAGCAGGAGTAATAACTACCATAAGTATGGCTAATGGAATCAATATGTATTTATCTATTATTTTTGGATTATT
GGTTGGTGCAGCAATAGGTTTTGTTAATGGTCTAGTGACGACCAAGGGTAAGATCCATTCTTTTATCGCAACTTTAGGTA
TGATGGGTATTGCCAGGGGATTAGCATTAATAATTACAGGAGGTATTCCAGTCTCAGGTTTACCAAGTGAATTTGATTTT
ATGGGAGCAGGAAAAATATTTGGTTTTTTTCCAGTACCGGTTTTTATTTTAATTATTGTTGCTATAATAGCACATTTAAT
TTTATCGAAGACAAGAATAGGAAGATATACATATGCAATAGGTAGTAACGCAGAAGCAACTCGCCTGTCAGGTGTTAAAG
TTGATAAATATTTAATAATTGTTTTTACTATATCAGGGTTGATGGCATCATTAGGTGGCATAGTTCAGGCCTCTAGATTA
GTAACCGGACAGCCTACTGCTGGAACAGGTTATGAGTTAGATGCTATTGCTGCTGCAGTAATCGGTGGAACAAGTTTATT
GGGTGGAGAAGGAAGTATTTTAGGTACAATAATTGGAGCCCTAATTATGGGTGTGCTAAGAAATGGTGCTAATTTATTAA
ATATATCTGAATTTATTCAACAGGTTTTAATTGGGATAATTATAATTTCAGCTGTTATTTATGATAGACACCGCCGTAGT
AAGAATTAA

Upstream 100 bases:

>100_bases
GGGGAATTAAGTTCAAAAGAAGCGACACAGGAAAAAATTATGCATTATGCCACTATGAATGTAATTAATTAAAAATTAAA
TTAAAAAGGAGTGAAAAATA

Downstream 100 bases:

>100_bases
ATTAAAAAATAATATTCTTTAAAAATAATTTAGATTTTATAGGAGGTAAAATTATGTCAAATAAAACAAATTTAAAAATT
AACAAACAACATCGCTTAAG

Product: Monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MIDNGVNETQMSFFKRFSEKIIPFTGLLIICIILSIASPYFLTLTNIMAIGIQTTVIAILGIGVTFVIITAGIDLSVGSV
LGLAGVITTISMANGINMYLSIIFGLLVGAAIGFVNGLVTTKGKIHSFIATLGMMGIARGLALIITGGIPVSGLPSEFDF
MGAGKIFGFFPVPVFILIIVAIIAHLILSKTRIGRYTYAIGSNAEATRLSGVKVDKYLIIVFTISGLMASLGGIVQASRL
VTGQPTAGTGYELDAIAAAVIGGTSLLGGEGSILGTIIGALIMGVLRNGANLLNISEFIQQVLIGIIIISAVIYDRHRRS
KN

Sequences:

>Translated_322_residues
MIDNGVNETQMSFFKRFSEKIIPFTGLLIICIILSIASPYFLTLTNIMAIGIQTTVIAILGIGVTFVIITAGIDLSVGSV
LGLAGVITTISMANGINMYLSIIFGLLVGAAIGFVNGLVTTKGKIHSFIATLGMMGIARGLALIITGGIPVSGLPSEFDF
MGAGKIFGFFPVPVFILIIVAIIAHLILSKTRIGRYTYAIGSNAEATRLSGVKVDKYLIIVFTISGLMASLGGIVQASRL
VTGQPTAGTGYELDAIAAAVIGGTSLLGGEGSILGTIIGALIMGVLRNGANLLNISEFIQQVLIGIIIISAVIYDRHRRS
KN
>Mature_322_residues
MIDNGVNETQMSFFKRFSEKIIPFTGLLIICIILSIASPYFLTLTNIMAIGIQTTVIAILGIGVTFVIITAGIDLSVGSV
LGLAGVITTISMANGINMYLSIIFGLLVGAAIGFVNGLVTTKGKIHSFIATLGMMGIARGLALIITGGIPVSGLPSEFDF
MGAGKIFGFFPVPVFILIIVAIIAHLILSKTRIGRYTYAIGSNAEATRLSGVKVDKYLIIVFTISGLMASLGGIVQASRL
VTGQPTAGTGYELDAIAAAVIGGTSLLGGEGSILGTIIGALIMGVLRNGANLLNISEFIQQVLIGIIIISAVIYDRHRRS
KN

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=311, Percent_Identity=46.3022508038585, Blast_Score=241, Evalue=4e-65,
Organism=Escherichia coli, GI1790524, Length=317, Percent_Identity=40.6940063091483, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI145693152, Length=321, Percent_Identity=39.2523364485981, Blast_Score=191, Evalue=4e-50,
Organism=Escherichia coli, GI1788896, Length=315, Percent_Identity=36.5079365079365, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787793, Length=280, Percent_Identity=34.2857142857143, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1789992, Length=134, Percent_Identity=48.5074626865672, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1788471, Length=316, Percent_Identity=34.8101265822785, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI145693214, Length=234, Percent_Identity=36.7521367521368, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI87082395, Length=287, Percent_Identity=33.4494773519164, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1787794, Length=292, Percent_Identity=28.4246575342466, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33581; Mature: 33581

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDNGVNETQMSFFKRFSEKIIPFTGLLIICIILSIASPYFLTLTNIMAIGIQTTVIAIL
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GIGVTFVIITAGIDLSVGSVLGLAGVITTISMANGINMYLSIIFGLLVGAAIGFVNGLVT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
TKGKIHSFIATLGMMGIARGLALIITGGIPVSGLPSEFDFMGAGKIFGFFPVPVFILIIV
CCHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AIIAHLILSKTRIGRYTYAIGSNAEATRLSGVKVDKYLIIVFTISGLMASLGGIVQASRL
HHHHHHHHHHHHCCCEEEEECCCCCHHHCCCEEEHHHEEHHHHHHHHHHHHHHHHHHHHH
VTGQPTAGTGYELDAIAAAVIGGTSLLGGEGSILGTIIGALIMGVLRNGANLLNISEFIQ
CCCCCCCCCCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCCCCEECHHHHHH
QVLIGIIIISAVIYDRHRRSKN
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIDNGVNETQMSFFKRFSEKIIPFTGLLIICIILSIASPYFLTLTNIMAIGIQTTVIAIL
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GIGVTFVIITAGIDLSVGSVLGLAGVITTISMANGINMYLSIIFGLLVGAAIGFVNGLVT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
TKGKIHSFIATLGMMGIARGLALIITGGIPVSGLPSEFDFMGAGKIFGFFPVPVFILIIV
CCHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AIIAHLILSKTRIGRYTYAIGSNAEATRLSGVKVDKYLIIVFTISGLMASLGGIVQASRL
HHHHHHHHHHHHCCCEEEEECCCCCHHHCCCEEEHHHEEHHHHHHHHHHHHHHHHHHHHH
VTGQPTAGTGYELDAIAAAVIGGTSLLGGEGSILGTIIGALIMGVLRNGANLLNISEFIQ
CCCCCCCCCCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCCCCEECHHHHHH
QVLIGIIIISAVIYDRHRRSKN
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]