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The map label for this gene is pyrF [H]

Identifier: 220931782

GI number: 220931782

Start: 1012608

End: 1013543

Strand: Direct

Name: pyrF [H]

Synonym: Hore_09390

Alternate gene names: 220931782

Gene position: 1012608-1013543 (Clockwise)

Preceding gene: 220931781

Following gene: 220931783

Centisome position: 39.28

GC content: 42.84

Gene sequence:

>936_bases
ATGAAGTCCTTTATAGATAGGTTAATAGAAAAGGTGAAAAAAAAGCGGAGTCATGTCTGTGTTGGACTGGATCCCCACCT
TGAGCAGTTGCCCAAGCACCTGATGAATAAAGCCCGGGAAAAGGTAAAAGGAGATAACTCCAGGCAGGTGGCCTTGGGAC
TTGCCATCTGGTGGTTTAATAAAACCATAATTGATAATATTTATGATATAGCAGTAGCGGTAAAACCCCAGGTTGCCTTT
TATGAAAAGGTAGGTTCATCGGGGATGCTGGCATTAAAAGAAACGGTCCAGTATGCCAGGCAAAAAGGTTTGCTAGTAAT
ACTTGATGGGAAAAGAAATGATATAGGTTCAACAGCAAGGGCATATGCAGAAGCCTATCTAAAGGGGCAGGGTCTCGATA
ATTCAATTCAGGCGGATGCCATTACTGTAAATCCCTATCTCGGGGTTGATGGGATTAAACCTTTTATAGAAAATAAAGAG
AACGGGGCTTTTGTGTTAATAAAAACATCTAACCCCAGCTCCGGTGATTTGCAGGATTTAGTCTTAAAAGATGGGAATAA
ACTCTATCAGAAAATGGGCCAGTATGTGTCTGAGTGGGGACAAAATAGTATTGGGGAGAATGGTTATTCTAATCTGGGGG
CAGTAGTTGGTGCCACTTATCCAGAGGAACTTAAAATTCTCAGGTATGAGATGCCACACAGCTATTTCCTGATTCCAGGA
TTCGGGGTTCAGGGTGGGAGTGTCTTAGATGTAGTTAACGGTTTTAATGATGATGGACTGGGGGCTATAGTTAACTCCTC
CAGGGGTATTATCTTTGCCTATCGTAGAGAACCATGGTCTGGCAGGTTTGTTGAAAAGGAATTTGGACTCGCTGCCAGAG
CAGCTGCTCTGGATATGAAGGACAAAATAAATTCAGCCTTAGGAGGGAGAAGATAG

Upstream 100 bases:

>100_bases
AAAGGGAAAAATACTCCTTTCGCCGACTGGGAACTTACCGGTAAAGTTGTTATGACTATAGTGGATGGTAAAATAGTTTA
TGATGACCGGAGTGGTAATA

Downstream 100 bases:

>100_bases
TATGAAAGGGAAACTTAATTTGAAGGGCAGAAATTGTATTAAGGGTACATTGGTCGGGGTAATTGGCAAGAAGGTAGAAG
GCAGGGTAGCCAGTGTAGGT

Product: Orotidine-5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKSFIDRLIEKVKKKRSHVCVGLDPHLEQLPKHLMNKAREKVKGDNSRQVALGLAIWWFNKTIIDNIYDIAVAVKPQVAF
YEKVGSSGMLALKETVQYARQKGLLVILDGKRNDIGSTARAYAEAYLKGQGLDNSIQADAITVNPYLGVDGIKPFIENKE
NGAFVLIKTSNPSSGDLQDLVLKDGNKLYQKMGQYVSEWGQNSIGENGYSNLGAVVGATYPEELKILRYEMPHSYFLIPG
FGVQGGSVLDVVNGFNDDGLGAIVNSSRGIIFAYRREPWSGRFVEKEFGLAARAAALDMKDKINSALGGRR

Sequences:

>Translated_311_residues
MKSFIDRLIEKVKKKRSHVCVGLDPHLEQLPKHLMNKAREKVKGDNSRQVALGLAIWWFNKTIIDNIYDIAVAVKPQVAF
YEKVGSSGMLALKETVQYARQKGLLVILDGKRNDIGSTARAYAEAYLKGQGLDNSIQADAITVNPYLGVDGIKPFIENKE
NGAFVLIKTSNPSSGDLQDLVLKDGNKLYQKMGQYVSEWGQNSIGENGYSNLGAVVGATYPEELKILRYEMPHSYFLIPG
FGVQGGSVLDVVNGFNDDGLGAIVNSSRGIIFAYRREPWSGRFVEKEFGLAARAAALDMKDKINSALGGRR
>Mature_311_residues
MKSFIDRLIEKVKKKRSHVCVGLDPHLEQLPKHLMNKAREKVKGDNSRQVALGLAIWWFNKTIIDNIYDIAVAVKPQVAF
YEKVGSSGMLALKETVQYARQKGLLVILDGKRNDIGSTARAYAEAYLKGQGLDNSIQADAITVNPYLGVDGIKPFIENKE
NGAFVLIKTSNPSSGDLQDLVLKDGNKLYQKMGQYVSEWGQNSIGENGYSNLGAVVGATYPEELKILRYEMPHSYFLIPG
FGVQGGSVLDVVNGFNDDGLGAIVNSSRGIIFAYRREPWSGRFVEKEFGLAARAAALDMKDKINSALGGRR

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 34276; Mature: 34276

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFIDRLIEKVKKKRSHVCVGLDPHLEQLPKHLMNKAREKVKGDNSRQVALGLAIWWFN
CHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHH
KTIIDNIYDIAVAVKPQVAFYEKVGSSGMLALKETVQYARQKGLLVILDGKRNDIGSTAR
HHHHHHHHHEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHH
AYAEAYLKGQGLDNSIQADAITVNPYLGVDGIKPFIENKENGAFVLIKTSNPSSGDLQDL
HHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCHHHH
VLKDGNKLYQKMGQYVSEWGQNSIGENGYSNLGAVVGATYPEELKILRYEMPHSYFLIPG
HHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHEEEEECCCCEEEEEC
FGVQGGSVLDVVNGFNDDGLGAIVNSSRGIIFAYRREPWSGRFVEKEFGLAARAAALDMK
CCCCCCCHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEHHHHCHHHHHHHHHHH
DKINSALGGRR
HHHHHHHCCCC
>Mature Secondary Structure
MKSFIDRLIEKVKKKRSHVCVGLDPHLEQLPKHLMNKAREKVKGDNSRQVALGLAIWWFN
CHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHH
KTIIDNIYDIAVAVKPQVAFYEKVGSSGMLALKETVQYARQKGLLVILDGKRNDIGSTAR
HHHHHHHHHEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHH
AYAEAYLKGQGLDNSIQADAITVNPYLGVDGIKPFIENKENGAFVLIKTSNPSSGDLQDL
HHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCHHHH
VLKDGNKLYQKMGQYVSEWGQNSIGENGYSNLGAVVGATYPEELKILRYEMPHSYFLIPG
HHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHEEEEECCCCEEEEEC
FGVQGGSVLDVVNGFNDDGLGAIVNSSRGIIFAYRREPWSGRFVEKEFGLAARAAALDMK
CCCCCCCHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEHHHHCHHHHHHHHHHH
DKINSALGGRR
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]