Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is yteA [H]

Identifier: 220931773

GI number: 220931773

Start: 1002906

End: 1003592

Strand: Direct

Name: yteA [H]

Synonym: Hore_09300

Alternate gene names: 220931773

Gene position: 1002906-1003592 (Clockwise)

Preceding gene: 220931772

Following gene: 220931774

Centisome position: 38.9

GC content: 41.19

Gene sequence:

>687_bases
ATGGATAGGACAAAAGAGAAAAAATACCGTCAATTATTAATAAATGAAAAAAATAGTTTATTACATGAGCTAAAACATTT
TTCTGATGACGAGTTTGCCAGTGTTAAGGACTCAACCGGAGAATTATCCAGTTACGATAATCATCCAGCCGATCAGGGAA
GTAATACCTATGACCGGGAGAAAGACAGAGGTTTAAGGGATAATGCACAGGTATTATTAAATAAAGTCGAAAACGCCCTT
AACAGGCTAGAAGAAGGTAATTATGGATTGTGTGAAAAATGTGGCCAGGAGATAAGGGAGGAAAGACTGGAAACCATTCC
TTACGCAACCCTGTGTGAGCGTTGTCAGGCGAAAGAGGAAGGGAAGGATTATAACAGGGACCGCCCCCTTGAAGAAGAAA
ATTTGACTCCTCCCTTTGGTAGAGGGTTCTATGACGAGACAAATTATAATGCCTATGATGCTGAGGATACCTGGCAGGAT
GTGGCCCAGTATGGAACTTCCAATACACCCCAGGATGTCCCTGAAGAGACTTCAGGGACGGGGGCAGAGGCTTATATTGA
TTCAGAAGAGACTGTTGGGTCAGTTGGATTTGAAGATAGTATCATTGATGATGAAGCAGATAATTTAGAAGAGGCATCTG
AAAAAGAGAGTACTTTTACCGGGGAAAAAGGAAAGGATAAAAAATAG

Upstream 100 bases:

>100_bases
TAAAAGTTTATAATTAAGTTCCCGTTAAAATTCCAATATTATATATTTTACTCATTACATTTTCTTCAATATTAAATTGA
TTCAGGAAAGAGGTAATAGA

Downstream 100 bases:

>100_bases
ATAATATAACGGTATAGCTTCTGGTTATACCGTTATTTATTTGTAATTAAATACAAATGTAAGTGGGGAGGTTTTTAATT
TATTTTGAAGAATATTTTAT

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: ORFQ [H]

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDREKDRGLRDNAQVLLNKVENAL
NRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEEGKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQD
VAQYGTSNTPQDVPEETSGTGAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK

Sequences:

>Translated_228_residues
MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDREKDRGLRDNAQVLLNKVENAL
NRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEEGKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQD
VAQYGTSNTPQDVPEETSGTGAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK
>Mature_228_residues
MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDREKDRGLRDNAQVLLNKVENAL
NRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEEGKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQD
VAQYGTSNTPQDVPEETSGTGAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014240
- InterPro:   IPR000962 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 25970; Mature: 25970

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDRE
CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCHH
KDRGLRDNAQVLLNKVENALNRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEE
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQDVAQYGTSNTPQDVPEETSGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
GAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK
CCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDRE
CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCHH
KDRGLRDNAQVLLNKVENALNRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEE
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQDVAQYGTSNTPQDVPEETSGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
GAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK
CCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 10568751 [H]