| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is spoIIR [H]
Identifier: 220931760
GI number: 220931760
Start: 991459
End: 992142
Strand: Direct
Name: spoIIR [H]
Synonym: Hore_09170
Alternate gene names: 220931760
Gene position: 991459-992142 (Clockwise)
Preceding gene: 220931759
Following gene: 220931761
Centisome position: 38.46
GC content: 33.48
Gene sequence:
>684_bases ATGAAAGTATTGAAAGTTATAACCGGACTAATATTTTTAACTGTTGTATTATTGAGTATAAATGCAAATAGCGCCTATGT AATTAAAGATACTTCTGATCTTATTAATGCCTATAATAACAATAATCTAGTTCGATTCCATGTAGTTGCCAATAGTAATT CACCTGAGGATCAATATATAAAAAGACAGGTCAGGGATGAAGTAATAAAGTATATGTCAAGAACCAGCCCTGACGGGTTA AAGAAACAGGTTAGTAAGACACGTTTACAGGAGATTGAAGAATTTACAAATAACCTCCTTACGAATGAAGGCGTGGATTA CCGGGCCCGGGTTCAATATGGAAGATTTTATTTTCCGAAAAGGACGTACGGGAAACTTACATTACCAGCAGGAGATTATA ATGCCCTGAAAATAATTCTTGGTAAAGGACAGGGAGCAAACTGGTGGTGTGTTTTGTTTCCACCCCTTTGTGTCCAGGAA AAAAATCAATCTGCTTCAGTATCAGGGAGTATAAAATCATCAAAAATTGAGTTCAGGTTTAAAATTTTGGAGCTTTTACA GGATAATAAGAAGAAAATTAATGATATAAAACTGACCCGTATTTTAATAAATAAACTGGAGCTGAATAAATTTATTTATA GAGAAAAATTTATAGATAGTCAGCCAGAGGGGGTTTATAATTAA
Upstream 100 bases:
>100_bases AGGTAGCCAATGAGATCGGAATATCTCAGGCCCAGGTTTCAAGACTGGAAAAGGCTGCATTAAAAAGGTTAAAAAGGCAT GTAAAGGAGGATAGATAACC
Downstream 100 bases:
>100_bases ACCCCTTTTTTTTATTCACATAGCTTCCCCCTGAGTCATATTATATGTAGGTAAGAGAAGAGGGGAGGTTAAGAATTATG GTAAAAAAGTCAGAATTAAG
Product: Sporulation stage II protein R
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYIKRQVRDEVIKYMSRTSPDGL KKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPKRTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQE KNQSASVSGSIKSSKIEFRFKILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN
Sequences:
>Translated_227_residues MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYIKRQVRDEVIKYMSRTSPDGL KKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPKRTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQE KNQSASVSGSIKSSKIEFRFKILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN >Mature_227_residues MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYIKRQVRDEVIKYMSRTSPDGL KKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPKRTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQE KNQSASVSGSIKSSKIEFRFKILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014202 [H]
Pfam domain/function: PF09551 Spore_II_R [H]
EC number: NA
Molecular weight: Translated: 26165; Mature: 26165
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYI CHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCEEEEEEEECCCCCHHHHH KRQVRDEVIKYMSRTSPDGLKKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEECCC RTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQEKNQSASVSGSIKSSKIEFRF CCCCEEEECCCCCCEEEEEEECCCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH KILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYI CHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCEEEEEEEECCCCCHHHHH KRQVRDEVIKYMSRTSPDGLKKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEECCC RTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQEKNQSASVSGSIKSSKIEFRF CCCCEEEECCCCCCEEEEEEECCCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH KILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]