Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is spoIIR [H]

Identifier: 220931760

GI number: 220931760

Start: 991459

End: 992142

Strand: Direct

Name: spoIIR [H]

Synonym: Hore_09170

Alternate gene names: 220931760

Gene position: 991459-992142 (Clockwise)

Preceding gene: 220931759

Following gene: 220931761

Centisome position: 38.46

GC content: 33.48

Gene sequence:

>684_bases
ATGAAAGTATTGAAAGTTATAACCGGACTAATATTTTTAACTGTTGTATTATTGAGTATAAATGCAAATAGCGCCTATGT
AATTAAAGATACTTCTGATCTTATTAATGCCTATAATAACAATAATCTAGTTCGATTCCATGTAGTTGCCAATAGTAATT
CACCTGAGGATCAATATATAAAAAGACAGGTCAGGGATGAAGTAATAAAGTATATGTCAAGAACCAGCCCTGACGGGTTA
AAGAAACAGGTTAGTAAGACACGTTTACAGGAGATTGAAGAATTTACAAATAACCTCCTTACGAATGAAGGCGTGGATTA
CCGGGCCCGGGTTCAATATGGAAGATTTTATTTTCCGAAAAGGACGTACGGGAAACTTACATTACCAGCAGGAGATTATA
ATGCCCTGAAAATAATTCTTGGTAAAGGACAGGGAGCAAACTGGTGGTGTGTTTTGTTTCCACCCCTTTGTGTCCAGGAA
AAAAATCAATCTGCTTCAGTATCAGGGAGTATAAAATCATCAAAAATTGAGTTCAGGTTTAAAATTTTGGAGCTTTTACA
GGATAATAAGAAGAAAATTAATGATATAAAACTGACCCGTATTTTAATAAATAAACTGGAGCTGAATAAATTTATTTATA
GAGAAAAATTTATAGATAGTCAGCCAGAGGGGGTTTATAATTAA

Upstream 100 bases:

>100_bases
AGGTAGCCAATGAGATCGGAATATCTCAGGCCCAGGTTTCAAGACTGGAAAAGGCTGCATTAAAAAGGTTAAAAAGGCAT
GTAAAGGAGGATAGATAACC

Downstream 100 bases:

>100_bases
ACCCCTTTTTTTTATTCACATAGCTTCCCCCTGAGTCATATTATATGTAGGTAAGAGAAGAGGGGAGGTTAAGAATTATG
GTAAAAAAGTCAGAATTAAG

Product: Sporulation stage II protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYIKRQVRDEVIKYMSRTSPDGL
KKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPKRTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQE
KNQSASVSGSIKSSKIEFRFKILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN

Sequences:

>Translated_227_residues
MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYIKRQVRDEVIKYMSRTSPDGL
KKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPKRTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQE
KNQSASVSGSIKSSKIEFRFKILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN
>Mature_227_residues
MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYIKRQVRDEVIKYMSRTSPDGL
KKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPKRTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQE
KNQSASVSGSIKSSKIEFRFKILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014202 [H]

Pfam domain/function: PF09551 Spore_II_R [H]

EC number: NA

Molecular weight: Translated: 26165; Mature: 26165

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYI
CHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
KRQVRDEVIKYMSRTSPDGLKKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEECCC
RTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQEKNQSASVSGSIKSSKIEFRF
CCCCEEEECCCCCCEEEEEEECCCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
KILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKVLKVITGLIFLTVVLLSINANSAYVIKDTSDLINAYNNNNLVRFHVVANSNSPEDQYI
CHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
KRQVRDEVIKYMSRTSPDGLKKQVSKTRLQEIEEFTNNLLTNEGVDYRARVQYGRFYFPK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEECCC
RTYGKLTLPAGDYNALKIILGKGQGANWWCVLFPPLCVQEKNQSASVSGSIKSSKIEFRF
CCCCEEEECCCCCCEEEEEEECCCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
KILELLQDNKKKINDIKLTRILINKLELNKFIYREKFIDSQPEGVYN
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]