| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931677
Identifier: 220931677
GI number: 220931677
Start: 897691
End: 898197
Strand: Reverse
Name: 220931677
Synonym: Hore_08330
Alternate gene names: NA
Gene position: 898197-897691 (Counterclockwise)
Preceding gene: 220931701
Following gene: 220931673
Centisome position: 34.84
GC content: 40.63
Gene sequence:
>507_bases ATGAAATTAACTAATCGTAAAATTGTTGTCGCGGGGATGTTAGGAGCTATTTCAATAGTACTGGGAATATCAGGATTGGG GTTAATACCGGTGCCTACCATGGCAGGGAATGTAACCATTATGCATGTTCCTACAATCCTGGGTGGGGTCCTGGAAGGAC CTCTGGTTGGTTTATTGATAGGGTTAATTTTTGGATTATTTAGTTTTATGCAGGCATCAAGCCCCCTCTTTGCTGACCCT TTAGTTTCCATAATTCCAAGGTTGTTTATTGGAATTACTTCTTATCTAGTCTATGCTGTATTCAAAAAGAAAAATAAGAA CCTGGGATTAATATCAGCAGGAATTGTAGGCACTGCTACCAATACCATACTGGTTCTCGGAATGGGAGTTATCAGGGGAT ACATACCCTTTGAGGGTGCTTTGTCAATTGCTGTCATCCACGGTATACCAGAAGCCATTGTTGCCACCCTGTTGACATTA TTAATTGGACGTAAATTCACAAGATGA
Upstream 100 bases:
>100_bases TATTTAAAAATTTAACTCCCAACTAGGAATTTAATATTAAATGTAGAATTAGTTTAATACAGCATTCCCCTGGATCAAAA AATGACCGGGAGGGATTTAA
Downstream 100 bases:
>100_bases CGTAAATTCACAAGATAATATTAAGAAAAAAGAAGAGAACCTGGAAACCATTTATAAAATACATTTTTGTTTCTTTAAAT GTATTCTTCCTCAAGATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKLTNRKIVVAGMLGAISIVLGISGLGLIPVPTMAGNVTIMHVPTILGGVLEGPLVGLLIGLIFGLFSFMQASSPLFADP LVSIIPRLFIGITSYLVYAVFKKKNKNLGLISAGIVGTATNTILVLGMGVIRGYIPFEGALSIAVIHGIPEAIVATLLTL LIGRKFTR
Sequences:
>Translated_168_residues MKLTNRKIVVAGMLGAISIVLGISGLGLIPVPTMAGNVTIMHVPTILGGVLEGPLVGLLIGLIFGLFSFMQASSPLFADP LVSIIPRLFIGITSYLVYAVFKKKNKNLGLISAGIVGTATNTILVLGMGVIRGYIPFEGALSIAVIHGIPEAIVATLLTL LIGRKFTR >Mature_168_residues MKLTNRKIVVAGMLGAISIVLGISGLGLIPVPTMAGNVTIMHVPTILGGVLEGPLVGLLIGLIFGLFSFMQASSPLFADP LVSIIPRLFIGITSYLVYAVFKKKNKNLGLISAGIVGTATNTILVLGMGVIRGYIPFEGALSIAVIHGIPEAIVATLLTL LIGRKFTR
Specific function: Unknown
COG id: COG4684
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17522; Mature: 17522
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTNRKIVVAGMLGAISIVLGISGLGLIPVPTMAGNVTIMHVPTILGGVLEGPLVGLLI CCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHH GLIFGLFSFMQASSPLFADPLVSIIPRLFIGITSYLVYAVFKKKNKNLGLISAGIVGTAT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHH NTILVLGMGVIRGYIPFEGALSIAVIHGIPEAIVATLLTLLIGRKFTR HHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLTNRKIVVAGMLGAISIVLGISGLGLIPVPTMAGNVTIMHVPTILGGVLEGPLVGLLI CCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHH GLIFGLFSFMQASSPLFADPLVSIIPRLFIGITSYLVYAVFKKKNKNLGLISAGIVGTAT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHH NTILVLGMGVIRGYIPFEGALSIAVIHGIPEAIVATLLTLLIGRKFTR HHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA