| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is dut [H]
Identifier: 220931641
GI number: 220931641
Start: 857790
End: 858221
Strand: Direct
Name: dut [H]
Synonym: Hore_07970
Alternate gene names: 220931641
Gene position: 857790-858221 (Clockwise)
Preceding gene: 220931640
Following gene: 220931642
Centisome position: 33.27
GC content: 38.66
Gene sequence:
>432_bases ATGAAAATCAAAGTTAAAAGATTGGACAAAACTTTACCTTTACCTGAATACCAGCATTATGGTGAAGATGCTGGTATGGA TTTATATTCTGCTGAAGATAAAGTCCTTAAGCCCGGTGAATACAAATTAATAAAAACAGGCATAAAAATTGCTATACCAG AAGGGTATGGAGGTTTTGTTTATCCGCGAAGTGGATTGGCATTAAAACATGGGATTACAGTGTTAAATGCAGATGGTGTT ATTGATCCCGGTTATCGGGGAGAGGTTGGGGTAATCCTGATTAATCATAGTTCGTGTTCTTTTGAAATTAAGAAAGGGGA CCGGATTGCCCAGTTGATAATACATAAAACCTATGAAATTGAGTGGGAAGAAGTCGAGGACCTGGATAATAGCACCAGGG GAACTGGAGGTTTTGGTCATACGGGTATTTAG
Upstream 100 bases:
>100_bases ATTCCTGTGCGTGTTCATTAAAAAATGTATCCCAATTGATAATTAATATCAATAGTTATAAAATATATAGTAATTATAAA TAAAATTGAGGTGATACTGG
Downstream 100 bases:
>100_bases CTGGAGTGGTTGTAATGAAATTAAGAGACCTTAGTGGAAAAAAGTTAATAAACATTAAAACCGGTCGGGTCCTTGGTACA GTCAGGGATACTGATCTGGT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKIKVKRLDKTLPLPEYQHYGEDAGMDLYSAEDKVLKPGEYKLIKTGIKIAIPEGYGGFVYPRSGLALKHGITVLNADGV IDPGYRGEVGVILINHSSCSFEIKKGDRIAQLIIHKTYEIEWEEVEDLDNSTRGTGGFGHTGI
Sequences:
>Translated_143_residues MKIKVKRLDKTLPLPEYQHYGEDAGMDLYSAEDKVLKPGEYKLIKTGIKIAIPEGYGGFVYPRSGLALKHGITVLNADGV IDPGYRGEVGVILINHSSCSFEIKKGDRIAQLIIHKTYEIEWEEVEDLDNSTRGTGGFGHTGI >Mature_143_residues MKIKVKRLDKTLPLPEYQHYGEDAGMDLYSAEDKVLKPGEYKLIKTGIKIAIPEGYGGFVYPRSGLALKHGITVLNADGV IDPGYRGEVGVILINHSSCSFEIKKGDRIAQLIIHKTYEIEWEEVEDLDNSTRGTGGFGHTGI
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=142, Percent_Identity=50, Blast_Score=125, Evalue=9e-30, Organism=Homo sapiens, GI4503423, Length=142, Percent_Identity=50, Blast_Score=125, Evalue=1e-29, Organism=Homo sapiens, GI70906441, Length=142, Percent_Identity=50, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI1790071, Length=148, Percent_Identity=43.2432432432432, Blast_Score=103, Evalue=5e-24, Organism=Caenorhabditis elegans, GI71988561, Length=142, Percent_Identity=47.1830985915493, Blast_Score=116, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6319729, Length=143, Percent_Identity=40.5594405594406, Blast_Score=102, Evalue=2e-23, Organism=Drosophila melanogaster, GI19921126, Length=120, Percent_Identity=45.8333333333333, Blast_Score=105, Evalue=7e-24, Organism=Drosophila melanogaster, GI24583610, Length=120, Percent_Identity=45.8333333333333, Blast_Score=105, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15805; Mature: 15805
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKVKRLDKTLPLPEYQHYGEDAGMDLYSAEDKVLKPGEYKLIKTGIKIAIPEGYGGFV CEEEEECCCCCCCCCCHHHCCCCCCCEEECCCCCEECCCCEEEEECCEEEEECCCCCCEE YPRSGLALKHGITVLNADGVIDPGYRGEVGVILINHSSCSFEIKKGDRIAQLIIHKTYEI ECCCCCEEECCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCEEC EWEEVEDLDNSTRGTGGFGHTGI CHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIKVKRLDKTLPLPEYQHYGEDAGMDLYSAEDKVLKPGEYKLIKTGIKIAIPEGYGGFV CEEEEECCCCCCCCCCHHHCCCCCCCEEECCCCCEECCCCEEEEECCEEEEECCCCCCEE YPRSGLALKHGITVLNADGVIDPGYRGEVGVILINHSSCSFEIKKGDRIAQLIIHKTYEI ECCCCCEEECCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCEEC EWEEVEDLDNSTRGTGGFGHTGI CHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]