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The map label for this gene is ylxY [H]

Identifier: 220931640

GI number: 220931640

Start: 856986

End: 857672

Strand: Direct

Name: ylxY [H]

Synonym: Hore_07960

Alternate gene names: 220931640

Gene position: 856986-857672 (Clockwise)

Preceding gene: 220931639

Following gene: 220931641

Centisome position: 33.24

GC content: 40.76

Gene sequence:

>687_bases
TTGATAAAAAAATATGTTGTGGTTATTGCCTTATTTATTGGAATTGTAGCCGGTATGGCCCGGCATGAATTAACCATGCC
AGTTGTTAGCAGGCCAGATAGTCCCTTTTACCATGGTGTCAGGGGAAGAAATCAGGTAGCTATTACCGTTAATGTGGACT
GGGGGGAAAAATACCTTCCGGGTATGTTGAGGATATTACATGAGAACCAGGTAAAAGTAACTTTTTTTGTGACAGGAAAA
TGGGCCCGAAAATGTCCTGATCTCCTGCAGGAAATGGCTGCAATGGGACATGAAATTGGGAATCATGGATATAACCATGC
CCACCCGAAGCAGCTCAGCAATGAGGCTTTGGCAAAGTTAATTAAGGATAATGAAGAATTAATATACAAGGTAACCGGTC
AAAGAACAAAGCTTTTTGCCCCACCATATGGTGAAGTTGATTCCAGGATAACAAAGGTTGCCAGCAAGCTGGGTTATGAT
ACCATAATGTGGTCAGCTGATACAGTTGACTGGCAAAGGCCTTCACCGGATATCATTGTGCAAAGAGTAATGGCGAAAAT
TGACGATGGTGGTATAATTCTGATGCATCCAACTGAACCAACTCTTTATGCCCTTGAAGATATAATTAATAATCTGAGAC
AGAGAGGATATGAGATAGTAACCGTATCTGAATTAATATCAAAGTAA

Upstream 100 bases:

>100_bases
TTAAAATAGTCCCCCTGTCTGAATTAGTATATAAAGATAATTATTATATTCAGTCCCATTCCGGATTACAGGTAAGACAG
AAGGGGGCAGGTGATAGAAA

Downstream 100 bases:

>100_bases
ACTGGAAATAACTCCAAATTCCTGTGCGTGTTCATTAAAAAATGTATCCCAATTGATAATTAATATCAATAGTTATAAAA
TATATAGTAATTATAAATAA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIKKYVVVIALFIGIVAGMARHELTMPVVSRPDSPFYHGVRGRNQVAITVNVDWGEKYLPGMLRILHENQVKVTFFVTGK
WARKCPDLLQEMAAMGHEIGNHGYNHAHPKQLSNEALAKLIKDNEELIYKVTGQRTKLFAPPYGEVDSRITKVASKLGYD
TIMWSADTVDWQRPSPDIIVQRVMAKIDDGGIILMHPTEPTLYALEDIINNLRQRGYEIVTVSELISK

Sequences:

>Translated_228_residues
MIKKYVVVIALFIGIVAGMARHELTMPVVSRPDSPFYHGVRGRNQVAITVNVDWGEKYLPGMLRILHENQVKVTFFVTGK
WARKCPDLLQEMAAMGHEIGNHGYNHAHPKQLSNEALAKLIKDNEELIYKVTGQRTKLFAPPYGEVDSRITKVASKLGYD
TIMWSADTVDWQRPSPDIIVQRVMAKIDDGGIILMHPTEPTLYALEDIINNLRQRGYEIVTVSELISK
>Mature_228_residues
MIKKYVVVIALFIGIVAGMARHELTMPVVSRPDSPFYHGVRGRNQVAITVNVDWGEKYLPGMLRILHENQVKVTFFVTGK
WARKCPDLLQEMAAMGHEIGNHGYNHAHPKQLSNEALAKLIKDNEELIYKVTGQRTKLFAPPYGEVDSRITKVASKLGYD
TIMWSADTVDWQRPSPDIIVQRVMAKIDDGGIILMHPTEPTLYALEDIINNLRQRGYEIVTVSELISK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=144, Percent_Identity=28.4722222222222, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323339, Length=163, Percent_Identity=31.9018404907975, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 25780; Mature: 25780

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKYVVVIALFIGIVAGMARHELTMPVVSRPDSPFYHGVRGRNQVAITVNVDWGEKYLP
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCHHHH
GMLRILHENQVKVTFFVTGKWARKCPDLLQEMAAMGHEIGNHGYNHAHPKQLSNEALAKL
HHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
IKDNEELIYKVTGQRTKLFAPPYGEVDSRITKVASKLGYDTIMWSADTVDWQRPSPDIIV
HHCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHH
QRVMAKIDDGGIILMHPTEPTLYALEDIINNLRQRGYEIVTVSELISK
HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHHCC
>Mature Secondary Structure
MIKKYVVVIALFIGIVAGMARHELTMPVVSRPDSPFYHGVRGRNQVAITVNVDWGEKYLP
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCHHHH
GMLRILHENQVKVTFFVTGKWARKCPDLLQEMAAMGHEIGNHGYNHAHPKQLSNEALAKL
HHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
IKDNEELIYKVTGQRTKLFAPPYGEVDSRITKVASKLGYDTIMWSADTVDWQRPSPDIIV
HHCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHH
QRVMAKIDDGGIILMHPTEPTLYALEDIINNLRQRGYEIVTVSELISK
HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]