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The map label for this gene is ylxY [H]

Identifier: 220931639

GI number: 220931639

Start: 856198

End: 856989

Strand: Direct

Name: ylxY [H]

Synonym: Hore_07950

Alternate gene names: 220931639

Gene position: 856198-856989 (Clockwise)

Preceding gene: 220931637

Following gene: 220931640

Centisome position: 33.21

GC content: 35.35

Gene sequence:

>792_bases
ATGAATCGTATTTTAACCCTGGGAAAAAAAAGTATACTTGGTCTGGGGTTGCTTTTTTTTATTTCTGTATTTACGATCGG
CTTTTTCGCGGGTGATAAATATGGTGATGTTATCCCTGTTTTGAATAAAAGACTGGTTCCCATATATAAGGTTGACAGGG
TTGATAAAAAAATATCCATAACTCTGGATGGTACCTGGGGTGCTAATTATACAGAAGAATTACTTGATATTTTTGAAGAA
AATGATGTGAAGGTTACATTTTTTTTTGCTGGTTACTGGCTGGAGAAATATCCTGATCTTGTTAAAAAGATAGCAGTTGA
AGGTCATGATGTTGAAAACCATACTTATACCCATCCCCATTGTAATTCTTTATCACCTGAACAAATAGAAGATGAACTAG
AAAGAACCTCAGATTTAATTGAAGAATTAATAGGTAAGAGACCGAGATTTTTCCGTCCCCCATTTGGTGAATATAATAAT
AAGGTTATTGAAACTGCGACCGGTCTTGATTATCAGGTAGTACAATGGAGTCTTGATTCCCTTGACTGGCAAGAACCGGG
TGTGCAGTATATTGTTGACCGTATTTTAAACAATGTTACATCTGGTGAAATTGTATTAATGCATAATAATGCTCCCCATA
CTCCTGAAGCATTAAGGATATTAATTCCGGAGTTAAAAAAACGGGGTTTTAAAATAGTCCCCCTGTCTGAATTAGTATAT
AAAGATAATTATTATATTCAGTCCCATTCCGGATTACAGGTAAGACAGAAGGGGGCAGGTGATAGAAATTGA

Upstream 100 bases:

>100_bases
AAGTTTTATATTATAAATCTTTAATCTGACAGTTATTAAAAAGAATATAATCCCTCCAGTTTGCATAAGTTTTATTTAGG
AATAAATTGGAGGGATTAGA

Downstream 100 bases:

>100_bases
TAAAAAAATATGTTGTGGTTATTGCCTTATTTATTGGAATTGTAGCCGGTATGGCCCGGCATGAATTAACCATGCCAGTT
GTTAGCAGGCCAGATAGTCC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNRILTLGKKSILGLGLLFFISVFTIGFFAGDKYGDVIPVLNKRLVPIYKVDRVDKKISITLDGTWGANYTEELLDIFEE
NDVKVTFFFAGYWLEKYPDLVKKIAVEGHDVENHTYTHPHCNSLSPEQIEDELERTSDLIEELIGKRPRFFRPPFGEYNN
KVIETATGLDYQVVQWSLDSLDWQEPGVQYIVDRILNNVTSGEIVLMHNNAPHTPEALRILIPELKKRGFKIVPLSELVY
KDNYYIQSHSGLQVRQKGAGDRN

Sequences:

>Translated_263_residues
MNRILTLGKKSILGLGLLFFISVFTIGFFAGDKYGDVIPVLNKRLVPIYKVDRVDKKISITLDGTWGANYTEELLDIFEE
NDVKVTFFFAGYWLEKYPDLVKKIAVEGHDVENHTYTHPHCNSLSPEQIEDELERTSDLIEELIGKRPRFFRPPFGEYNN
KVIETATGLDYQVVQWSLDSLDWQEPGVQYIVDRILNNVTSGEIVLMHNNAPHTPEALRILIPELKKRGFKIVPLSELVY
KDNYYIQSHSGLQVRQKGAGDRN
>Mature_263_residues
MNRILTLGKKSILGLGLLFFISVFTIGFFAGDKYGDVIPVLNKRLVPIYKVDRVDKKISITLDGTWGANYTEELLDIFEE
NDVKVTFFFAGYWLEKYPDLVKKIAVEGHDVENHTYTHPHCNSLSPEQIEDELERTSDLIEELIGKRPRFFRPPFGEYNN
KVIETATGLDYQVVQWSLDSLDWQEPGVQYIVDRILNNVTSGEIVLMHNNAPHTPEALRILIPELKKRGFKIVPLSELVY
KDNYYIQSHSGLQVRQKGAGDRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=128, Percent_Identity=33.59375, Blast_Score=69, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6323339, Length=176, Percent_Identity=28.4090909090909, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30204; Mature: 30204

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRILTLGKKSILGLGLLFFISVFTIGFFAGDKYGDVIPVLNKRLVPIYKVDRVDKKISI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEECCCCCEEEE
TLDGTWGANYTEELLDIFEENDVKVTFFFAGYWLEKYPDLVKKIAVEGHDVENHTYTHPH
EEECCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
CNSLSPEQIEDELERTSDLIEELIGKRPRFFRPPFGEYNNKVIETATGLDYQVVQWSLDS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCC
LDWQEPGVQYIVDRILNNVTSGEIVLMHNNAPHTPEALRILIPELKKRGFKIVPLSELVY
CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHC
KDNYYIQSHSGLQVRQKGAGDRN
CCCEEEECCCCCEEEECCCCCCC
>Mature Secondary Structure
MNRILTLGKKSILGLGLLFFISVFTIGFFAGDKYGDVIPVLNKRLVPIYKVDRVDKKISI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEECCCCCEEEE
TLDGTWGANYTEELLDIFEENDVKVTFFFAGYWLEKYPDLVKKIAVEGHDVENHTYTHPH
EEECCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
CNSLSPEQIEDELERTSDLIEELIGKRPRFFRPPFGEYNNKVIETATGLDYQVVQWSLDS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCC
LDWQEPGVQYIVDRILNNVTSGEIVLMHNNAPHTPEALRILIPELKKRGFKIVPLSELVY
CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHC
KDNYYIQSHSGLQVRQKGAGDRN
CCCEEEECCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]