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The map label for this gene is ylxR [H]

Identifier: 220931627

GI number: 220931627

Start: 841911

End: 842183

Strand: Direct

Name: ylxR [H]

Synonym: Hore_07830

Alternate gene names: 220931627

Gene position: 841911-842183 (Clockwise)

Preceding gene: 220931626

Following gene: 220931628

Centisome position: 32.66

GC content: 36.26

Gene sequence:

>273_bases
ATGTCCCGAAAGGTTCCGGTTCGAATGTGTATCGGGTGTCAGACCAGGAAGCCAAAAAAAGAGTTAATAAGAATAATATA
TAATAAAAAAACGGGAGAAATAAAGGTTGATCCGTCCGGTAAATTGCCAGGACGAGGTGCTTATATTTGTCCCGACAAGG
GGTGTTTAAAAAAGGCTAAAAAAGGAAATAGACTCAATAAATCTCTAAAGACTTCAATTTCTGACGAGATTTATACAAAA
TTGATGGAGGAGATTGATAAAATGAATGGATAG

Upstream 100 bases:

>100_bases
GGTTGAGAAAAAAATTCCCGCAGATGATGGGGAAAAAGTTGATGAAGTAGGGGTTGAAGATGATAGTCTAGATATAGAAG
AGAGTTAGGAGGGATTTATT

Downstream 100 bases:

>100_bases
TCAGGTAATTTTTCTGGAGGTGAAATTATGAGTAAAATTAGAGTTTATAAACTGGCAAAGGAATTAGGTAAATCCAGTAA
AGAACTGGTTAATATTTTAA

Product: putative nucleic-acid-binding protein implicated in transcription termination

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSRKVPVRMCIGCQTRKPKKELIRIIYNKKTGEIKVDPSGKLPGRGAYICPDKGCLKKAKKGNRLNKSLKTSISDEIYTK
LMEEIDKMNG

Sequences:

>Translated_90_residues
MSRKVPVRMCIGCQTRKPKKELIRIIYNKKTGEIKVDPSGKLPGRGAYICPDKGCLKKAKKGNRLNKSLKTSISDEIYTK
LMEEIDKMNG
>Mature_89_residues
SRKVPVRMCIGCQTRKPKKELIRIIYNKKTGEIKVDPSGKLPGRGAYICPDKGCLKKAKKGNRLNKSLKTSISDEIYTKL
MEEIDKMNG

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007393 [H]

Pfam domain/function: PF04296 DUF448 [H]

EC number: NA

Molecular weight: Translated: 10170; Mature: 10039

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKVPVRMCIGCQTRKPKKELIRIIYNKKTGEIKVDPSGKLPGRGAYICPDKGCLKKAK
CCCCCCHHEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCHHHHHHHH
KGNRLNKSLKTSISDEIYTKLMEEIDKMNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRKVPVRMCIGCQTRKPKKELIRIIYNKKTGEIKVDPSGKLPGRGAYICPDKGCLKKAK
CCCCCHHEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCHHHHHHHH
KGNRLNKSLKTSISDEIYTKLMEEIDKMNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]