| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is ytfI [H]
Identifier: 220931563
GI number: 220931563
Start: 778213
End: 778872
Strand: Direct
Name: ytfI [H]
Synonym: Hore_07190
Alternate gene names: 220931563
Gene position: 778213-778872 (Clockwise)
Preceding gene: 220931562
Following gene: 220931564
Centisome position: 30.18
GC content: 29.39
Gene sequence:
>660_bases ATGCTATTTCTTTTATTAATTCCCCTACTATTTTTATTTTTACTTGTTCCTCTAAATATTAAATTAAATTATATTAGAGA CGGTAAAAATGATGAATTTTATTTAACAGTATTTTTGTTGGTAAAACCCTTTGGTCTCAGAGTTGTAATACCTTATATGC AATTTAATTTATTTAAACCACTTGTGAAAATTTTTGCTGACATAGATACCTACCTGACAGACCTTATGTCAAAAAGAGGG GAAGAGAAAATGGAAAGAGAGATTAACGGGGGGATTAATGATTTAAAGAAGATGTTTAAAAATGTTTTTAAAAAGAAAGA AATTATCAGGGTTTTTATAGAAAATTTAAAAATAAATTTATATGAATTTTGCTGGAAGACAGAATTTGGAACAGGTAATG CGGCACATACTGGAATTTTAACCGGAATAATATGGTCTATTAAAGGTGTAATTGTATCCAGTCTTGGTTCCCGAATGAAT AAATTTAGTGGAATACAGATTAAGGTAAATCCTGTCTTCAATAAAAGAACCTTTAAGACCCGCCTGCGGTGTATATTTTC AGTTAAATTAGGTAATATTATACTTGCAACACTAAAAGTCGTTGTGTACAAGTTTAAAGGGGGAACAGCTAAATGTCAGA ACATCCGATTGAAAAATTAA
Upstream 100 bases:
>100_bases AGATAAATGAAAATCAGGGTCAATAGTAAAAAGCGAATATATGGTATATATTTCTGAAAGTAGGGGAATTAATAAGATTA GTTAGCGGGGTGAAATTTCT
Downstream 100 bases:
>100_bases TGGATACGGCGATGAGTAATATAAAGAGCATGGTTGATGTGAATACCATAGTCGGAGATGCAGTTGAAACACCTGACGGG AGTGTTATTATACCCATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MLFLLLIPLLFLFLLVPLNIKLNYIRDGKNDEFYLTVFLLVKPFGLRVVIPYMQFNLFKPLVKIFADIDTYLTDLMSKRG EEKMEREINGGINDLKKMFKNVFKKKEIIRVFIENLKINLYEFCWKTEFGTGNAAHTGILTGIIWSIKGVIVSSLGSRMN KFSGIQIKVNPVFNKRTFKTRLRCIFSVKLGNIILATLKVVVYKFKGGTAKCQNIRLKN
Sequences:
>Translated_219_residues MLFLLLIPLLFLFLLVPLNIKLNYIRDGKNDEFYLTVFLLVKPFGLRVVIPYMQFNLFKPLVKIFADIDTYLTDLMSKRG EEKMEREINGGINDLKKMFKNVFKKKEIIRVFIENLKINLYEFCWKTEFGTGNAAHTGILTGIIWSIKGVIVSSLGSRMN KFSGIQIKVNPVFNKRTFKTRLRCIFSVKLGNIILATLKVVVYKFKGGTAKCQNIRLKN >Mature_219_residues MLFLLLIPLLFLFLLVPLNIKLNYIRDGKNDEFYLTVFLLVKPFGLRVVIPYMQFNLFKPLVKIFADIDTYLTDLMSKRG EEKMEREINGGINDLKKMFKNVFKKKEIIRVFIENLKINLYEFCWKTEFGTGNAAHTGILTGIIWSIKGVIVSSLGSRMN KFSGIQIKVNPVFNKRTFKTRLRCIFSVKLGNIILATLKVVVYKFKGGTAKCQNIRLKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021338 [H]
Pfam domain/function: PF11167 DUF2953 [H]
EC number: NA
Molecular weight: Translated: 25343; Mature: 25343
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLLLIPLLFLFLLVPLNIKLNYIRDGKNDEFYLTVFLLVKPFGLRVVIPYMQFNLFKP CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHCCCCCEEEHHHHHHHHHHH LVKIFADIDTYLTDLMSKRGEEKMEREINGGINDLKKMFKNVFKKKEIIRVFIENLKINL HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEFCWKTEFGTGNAAHTGILTGIIWSIKGVIVSSLGSRMNKFSGIQIKVNPVFNKRTFKT HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH RLRCIFSVKLGNIILATLKVVVYKFKGGTAKCQNIRLKN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEECC >Mature Secondary Structure MLFLLLIPLLFLFLLVPLNIKLNYIRDGKNDEFYLTVFLLVKPFGLRVVIPYMQFNLFKP CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHCCCCCEEEHHHHHHHHHHH LVKIFADIDTYLTDLMSKRGEEKMEREINGGINDLKKMFKNVFKKKEIIRVFIENLKINL HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEFCWKTEFGTGNAAHTGILTGIIWSIKGVIVSSLGSRMNKFSGIQIKVNPVFNKRTFKT HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH RLRCIFSVKLGNIILATLKVVVYKFKGGTAKCQNIRLKN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]