| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is spoVAEB [H]
Identifier: 220931551
GI number: 220931551
Start: 764118
End: 764471
Strand: Direct
Name: spoVAEB [H]
Synonym: Hore_07070
Alternate gene names: 220931551
Gene position: 764118-764471 (Clockwise)
Preceding gene: 220931550
Following gene: 220931552
Centisome position: 29.64
GC content: 39.83
Gene sequence:
>354_bases ATGGGTAACTATTTGACAGCATTTTTTGTAGGTGGTTTAATATGTGCCCTGGGGCAGATTTTCCTTGATAACACTAAATA TACGCCAGCTCATCTATTGGTTGGGCTGGTAATTCTAGGATCTATCTTTACTGGACTGGGATGGTATGATAAATTGATTA AGTTTGCCGGAGCCGGGATAACTGTTCCCGTTTCCAATTTTGGTTATGTTTTAACCAAGGGGGTTTTGATGGAGGCTCAA AAAGATGGTCTCCTTGGTCTTTTTAAAGGGGTTTTTAAAATGGCCAGTGCCGGTGTCAGTGCTTCTGTAATAATTGCTTT TTTTATTGCAAGCCTGTTTAATCCCAGAGTTTAA
Upstream 100 bases:
>100_bases GGGGCTTTGCTCAGTTCTCTAACCGTAAAACAGGGGGAATCGATTCCTAGTGTTGCCCATGCGGTTGTCATAGAAAAAAT TCCAGGTGGTGAAAACAATA
Downstream 100 bases:
>100_bases TTAAGATTTTTCATATTAAGGTTCTATCACAATTGATTTGTCTTATCGTAACACTGGTTGACAACTTCTGTTTCACTGGC CTTCAATTATTAACATAAGG
Product: Sporulation stage V protein AE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MGNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGITVPVSNFGYVLTKGVLMEAQ KDGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV
Sequences:
>Translated_117_residues MGNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGITVPVSNFGYVLTKGVLMEAQ KDGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV >Mature_116_residues GNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGITVPVSNFGYVLTKGVLMEAQK DGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014204 - InterPro: IPR005562 [H]
Pfam domain/function: PF03862 SpoVA [H]
EC number: NA
Molecular weight: Translated: 12385; Mature: 12254
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGI CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC TVPVSNFGYVLTKGVLMEAQKDGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV EEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGI CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC TVPVSNFGYVLTKGVLMEAQKDGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV EEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]