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The map label for this gene is ybfF [C]

Identifier: 220931506

GI number: 220931506

Start: 717803

End: 718468

Strand: Direct

Name: ybfF [C]

Synonym: Hore_06620

Alternate gene names: 220931506

Gene position: 717803-718468 (Clockwise)

Preceding gene: 220931505

Following gene: 220931507

Centisome position: 27.84

GC content: 37.69

Gene sequence:

>666_bases
GTGAACAATCGACTTAAATCAGGTGTTTCTGTAATAGTTCCTGCGTATAATGAGGAAGATTATATAGAAGAAACTATAAA
AAATATTCCTGATGATTATGAAGTGATTATTGTTAATGATGGTTCTACAGATAAGACGGCACGTAAAGTCAAAAAGTATC
CAGTTATTTTGATTAACTTATCTTCTAATTATGGTAAAGGATATGCAATCTCTAGAGGTCTTGAGTATGCTTCAGGGTCA
ATTATTGTGCTGGCAGATGCAGATCTGGGGACGAGTGCTAACTTATTGAGAGATCTGGTTAAACCTGTTAAATCAGGTGA
AGCTGATGTTGTCATTGGTACTATTAAAATTAAAGGGGGAGGTCTTGGTCTGGTAAGGTTATTAGCCCATCATGGCCTGA
AATGGATGACAGGAAAGACAATGGCCTCTCCCTTGTCCGGACAGAGGGCTATTAACCGTGAGGTATTAAGTGTTTTAAAA
CCACTGTCATCAGGATTTGGCCTGGAAATTGGTATGGATTTAGATATAATAAGGAATAATATTAGATATAAAGAGGTAGA
ATGTGATATACGGCATCGGGTTACGGATAAATCCCTTAAGGGCTACTGGCATCGGGGGAAACAATTTACCCATATCCTGT
ATACTATGTGGCTAAAAAGGAGATAA

Upstream 100 bases:

>100_bases
GGGCTATATAGTAACCTAAAAGGAGAAGAGATAATATACCTGGATAATAAAGGGAGTATTGCGGATTTTATACTGTCTTT
GCTGGAGAGTGAAACAAATA

Downstream 100 bases:

>100_bases
TTTATGAATGATATAAAAGATGTACTTGATAAAGCAGGATTAATAAAAGAAAATTATTTAGGTAATTATATCCCTGCAGC
AGCAGGGGTTATTTTTATTA

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNNRLKSGVSVIVPAYNEEDYIEETIKNIPDDYEVIIVNDGSTDKTARKVKKYPVILINLSSNYGKGYAISRGLEYASGS
IIVLADADLGTSANLLRDLVKPVKSGEADVVIGTIKIKGGGLGLVRLLAHHGLKWMTGKTMASPLSGQRAINREVLSVLK
PLSSGFGLEIGMDLDIIRNNIRYKEVECDIRHRVTDKSLKGYWHRGKQFTHILYTMWLKRR

Sequences:

>Translated_221_residues
MNNRLKSGVSVIVPAYNEEDYIEETIKNIPDDYEVIIVNDGSTDKTARKVKKYPVILINLSSNYGKGYAISRGLEYASGS
IIVLADADLGTSANLLRDLVKPVKSGEADVVIGTIKIKGGGLGLVRLLAHHGLKWMTGKTMASPLSGQRAINREVLSVLK
PLSSGFGLEIGMDLDIIRNNIRYKEVECDIRHRVTDKSLKGYWHRGKQFTHILYTMWLKRR
>Mature_221_residues
MNNRLKSGVSVIVPAYNEEDYIEETIKNIPDDYEVIIVNDGSTDKTARKVKKYPVILINLSSNYGKGYAISRGLEYASGS
IIVLADADLGTSANLLRDLVKPVKSGEADVVIGTIKIKGGGLGLVRLLAHHGLKWMTGKTMASPLSGQRAINREVLSVLK
PLSSGFGLEIGMDLDIIRNNIRYKEVECDIRHRVTDKSLKGYWHRGKQFTHILYTMWLKRR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=121, Percent_Identity=30.5785123966942, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 24629; Mature: 24629

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRLKSGVSVIVPAYNEEDYIEETIKNIPDDYEVIIVNDGSTDKTARKVKKYPVILINL
CCCCHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCEEEEEE
SSNYGKGYAISRGLEYASGSIIVLADADLGTSANLLRDLVKPVKSGEADVVIGTIKIKGG
CCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCC
GLGLVRLLAHHGLKWMTGKTMASPLSGQRAINREVLSVLKPLSSGFGLEIGMDLDIIRNN
CHHHHHHHHHCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCC
IRYKEVECDIRHRVTDKSLKGYWHRGKQFTHILYTMWLKRR
CEEEEEEEHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNRLKSGVSVIVPAYNEEDYIEETIKNIPDDYEVIIVNDGSTDKTARKVKKYPVILINL
CCCCHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCEEEEEE
SSNYGKGYAISRGLEYASGSIIVLADADLGTSANLLRDLVKPVKSGEADVVIGTIKIKGG
CCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCC
GLGLVRLLAHHGLKWMTGKTMASPLSGQRAINREVLSVLKPLSSGFGLEIGMDLDIIRNN
CHHHHHHHHHCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCC
IRYKEVECDIRHRVTDKSLKGYWHRGKQFTHILYTMWLKRR
CEEEEEEEHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]