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The map label for this gene is exeD [H]

Identifier: 220931453

GI number: 220931453

Start: 662143

End: 664788

Strand: Direct

Name: exeD [H]

Synonym: Hore_06090

Alternate gene names: 220931453

Gene position: 662143-664788 (Clockwise)

Preceding gene: 220931452

Following gene: 220931454

Centisome position: 25.68

GC content: 37.49

Gene sequence:

>2646_bases
GTGAAGACTCATAAAAAGCTACTGGCCGGATTGATGTTATATCTAATTATTTTATCTATACCTGGATTTGCTTTTGCCAG
TAATGGCATTGATTCACATCCGGTTAAGGTTGATATGAATTTTGAAGAAGCAGAGATTCAGGATGTCCTTACAGCAATTG
CTTCTCTTGTAAATATTAATCTGGTTGTTGATAGTTCAGTATCAGGTGAAATTACGGTAAAACTTGATAATATGAGTTTT
AAAGAGGCCCTCGATTATGTTGTTAAAGTAAGTGGACTTGATTATGTCTGGAAAAATGATACCGTTATTGTAGCCAGTTC
AGAAAGGTTGAAGTCTTTTTATGGGGAAGAACTGGTAGAAACAGTAAGCCTGAAATACTCTGATCCAGTTCATATTTATC
AGCTTATCAAGGTGTTTTACCCGGAATTAAAAGTTCAGGTTGATTCCAATAACTTAAAGCTTCTTATGTCCGGCAAACGT
AAAACTATCCTGGCAGCCCGGAATTTGATAGACCGGATTGATGTGCCTGATAGTTTAATTACAGCAACCTATGTTGCCAA
GTTTATTAATGCAGACAGCCTGGAAAACCACCTCAGGCGGATTTATCCGGGGCTAGTTCTATCCTCAGACCGGGATAATA
ATATACTCTTAATATATGGTTCTAAAAGGAAAGTAAGAGAGGCTTTAGAGCTTGTTAACAGGATAGATTTACCCAGGAAA
GAGGCTACTTTTATAGTTGATATTAATAAAGGTGATGTGACAAGGATTGAAGAAACGGTTTTAAATTTATTCCCGGACCT
GGTTGTTGAAGGTAATGAAGCCTCACACAAGTTAATTATTAGCGGTGATAAAGAGGAGGCCCTTAAAGCCAGAGATTTAA
TAAAGGAAATCGATATCGGTGAGGAAATAGATACTGAGGTAGTCAGGGTAGACTATGGTAACCTTGATAATCTTATCTCA
GTCATTCAGGGCTTATTCCCGGATATAAGGTTACAGAGTAATCCCCTTAAAAAAGAAATTATTATTAAGGGAAATACCAG
TGAAGTTCAGGAGATTGTTTCCCTGGTTAACAGCCTGGATATCCCCAGAAGACAGGTAATAATTGAGGCCAGGTTTGAAG
AAATATCGGCCAATAAAATATCTGAGTTTGGTATGAGACCGAATTTAAGTGAAATTCAGTTTATTTTTGACGAAGCCACC
AGGGAGCTGAAGTCAATGAATATTACCTGGCCTGAATATCTAAGATTTCTGGAGGAGGAGGGACAGGCCAATATGCTGGC
CAATCCGAGGTTGCTTACCCTGAATGGAGAAAATGCCAGGCTTTTAATAGGAGATAAAGTTCCGGTTAAGATTGAAGAAA
CTTCAGGGTCTTCAGAAGAATCAGAAGGTGAAAGCAATGCAGTAAGCTATGAATATATTGATGTTGGTATTTCTTTAGAA
TTTACTCCCTGGATTACTGAAGATGGCTATATTATTATGGATGTGGCCCCTGAGGTCAGCAGCCTTGGTTCCCCCATGGG
TGGTGGAGAATCGATACCTCCAATAAAAACCAGGGAAGCCCGGACCAAAATCAGATTAAAGGATGGGCAGACCTTTGCCA
TCGGTGGTTTAATTAGGGAAGATGAACTCGAGAGTATTGCCAAGGTGCCTTTGCTCGGAGACATACCTTTATTGGGAACC
TTATTTAGAAGGTCACAGACAGATAAGGTTAAAACCGAAGTTGTTATTTTTATCACACCACATATTGTCAAGGAATCATT
TGGCGATATAACAACGGTAGATCAGAGTCGGGAAAAGGTTTTATCTAATAAAACCGATGAACCTTCAAAAAAGGAATCCA
CCCCGGATAAAGAGGTTGTAGATACAGGTGGAAAGGATTCGGAAAATATTTCAGTAGTCAGTAAAGTTTCCAGAGATGGG
GAAATTAAAGAAGGAAAAACCGGGAGTGAAGAAGAAGTAGATAATAATCTTGCAGGGAATAAAAAAGAAGATAGTGAGCC
CCATACAACCGAAAAAGAAGGTAGTAAGGGTAGTGAAGATGAAATAGATATCACCAGTAAGAACAGTACCAGTGAAACAA
CTGAAAATGAAGAAAATAGCGAGGAGACCAATACCGGGGAAATTATTAAGAGTAAAGATGATGTGACCGGTGAAAGCACA
GACGACTTTGGTGAAAAAAACATAATTGAAGGAGAAGTAAATAAAAAAGATGTTAATAAAGCTGAAGTAAATGAAACTGA
AGAAACAGTTGATGAGGCTACCAGAAAGGAACTTAAAAATATAATTAATAGTGAAATTATAAAACCAGGTAATGAAAGTA
GTGACAATAACCTACCTGAATATTATAATATATTGTATAAGGTAAAACCGGGTGATACCCTGGCCTCAATAGCAAGGAAG
TATGGTCTGTTTGTCAGTAACATAAAACTGGTAAATGGAATAGATGAAGTAAAAACAGGACAGACAATAACCCTGCCGAT
ACCAAAAAGCCATTTGTATATAATTAAAAAAGGTGAAACCCTGTGGCAGATATATTTAAAATTTGGTGTCAGTGTTTCTG
TCCTGCAAGAAATCAATAATATAAAAGATGTAAGAAAAATTCCGGCAGGAACTTTAATAATTATTCCAAAAAGGATAAAT
GACTAG

Upstream 100 bases:

>100_bases
GATGTAGTTGATGACCATAAAATAGTAGAAGTAACGAGAGATAGTATTATTATTTTATATCAGGATAAAATACATAAAAT
TAAGGTTGGGAGTGATTCCG

Downstream 100 bases:

>100_bases
AGGTGAATTAATGGTGTTAAGTTTTAAAACTGCGGGTGAATCCCACGGCAAGGGCTTAATGGTGATTATTGACGGAATGC
CGGCTGGAGTTAAGGTTGAT

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 881; Mature: 881

Protein sequence:

>881_residues
MKTHKKLLAGLMLYLIILSIPGFAFASNGIDSHPVKVDMNFEEAEIQDVLTAIASLVNINLVVDSSVSGEITVKLDNMSF
KEALDYVVKVSGLDYVWKNDTVIVASSERLKSFYGEELVETVSLKYSDPVHIYQLIKVFYPELKVQVDSNNLKLLMSGKR
KTILAARNLIDRIDVPDSLITATYVAKFINADSLENHLRRIYPGLVLSSDRDNNILLIYGSKRKVREALELVNRIDLPRK
EATFIVDINKGDVTRIEETVLNLFPDLVVEGNEASHKLIISGDKEEALKARDLIKEIDIGEEIDTEVVRVDYGNLDNLIS
VIQGLFPDIRLQSNPLKKEIIIKGNTSEVQEIVSLVNSLDIPRRQVIIEARFEEISANKISEFGMRPNLSEIQFIFDEAT
RELKSMNITWPEYLRFLEEEGQANMLANPRLLTLNGENARLLIGDKVPVKIEETSGSSEESEGESNAVSYEYIDVGISLE
FTPWITEDGYIIMDVAPEVSSLGSPMGGGESIPPIKTREARTKIRLKDGQTFAIGGLIREDELESIAKVPLLGDIPLLGT
LFRRSQTDKVKTEVVIFITPHIVKESFGDITTVDQSREKVLSNKTDEPSKKESTPDKEVVDTGGKDSENISVVSKVSRDG
EIKEGKTGSEEEVDNNLAGNKKEDSEPHTTEKEGSKGSEDEIDITSKNSTSETTENEENSEETNTGEIIKSKDDVTGEST
DDFGEKNIIEGEVNKKDVNKAEVNETEETVDEATRKELKNIINSEIIKPGNESSDNNLPEYYNILYKVKPGDTLASIARK
YGLFVSNIKLVNGIDEVKTGQTITLPIPKSHLYIIKKGETLWQIYLKFGVSVSVLQEINNIKDVRKIPAGTLIIIPKRIN
D

Sequences:

>Translated_881_residues
MKTHKKLLAGLMLYLIILSIPGFAFASNGIDSHPVKVDMNFEEAEIQDVLTAIASLVNINLVVDSSVSGEITVKLDNMSF
KEALDYVVKVSGLDYVWKNDTVIVASSERLKSFYGEELVETVSLKYSDPVHIYQLIKVFYPELKVQVDSNNLKLLMSGKR
KTILAARNLIDRIDVPDSLITATYVAKFINADSLENHLRRIYPGLVLSSDRDNNILLIYGSKRKVREALELVNRIDLPRK
EATFIVDINKGDVTRIEETVLNLFPDLVVEGNEASHKLIISGDKEEALKARDLIKEIDIGEEIDTEVVRVDYGNLDNLIS
VIQGLFPDIRLQSNPLKKEIIIKGNTSEVQEIVSLVNSLDIPRRQVIIEARFEEISANKISEFGMRPNLSEIQFIFDEAT
RELKSMNITWPEYLRFLEEEGQANMLANPRLLTLNGENARLLIGDKVPVKIEETSGSSEESEGESNAVSYEYIDVGISLE
FTPWITEDGYIIMDVAPEVSSLGSPMGGGESIPPIKTREARTKIRLKDGQTFAIGGLIREDELESIAKVPLLGDIPLLGT
LFRRSQTDKVKTEVVIFITPHIVKESFGDITTVDQSREKVLSNKTDEPSKKESTPDKEVVDTGGKDSENISVVSKVSRDG
EIKEGKTGSEEEVDNNLAGNKKEDSEPHTTEKEGSKGSEDEIDITSKNSTSETTENEENSEETNTGEIIKSKDDVTGEST
DDFGEKNIIEGEVNKKDVNKAEVNETEETVDEATRKELKNIINSEIIKPGNESSDNNLPEYYNILYKVKPGDTLASIARK
YGLFVSNIKLVNGIDEVKTGQTITLPIPKSHLYIIKKGETLWQIYLKFGVSVSVLQEINNIKDVRKIPAGTLIIIPKRIN
D
>Mature_881_residues
MKTHKKLLAGLMLYLIILSIPGFAFASNGIDSHPVKVDMNFEEAEIQDVLTAIASLVNINLVVDSSVSGEITVKLDNMSF
KEALDYVVKVSGLDYVWKNDTVIVASSERLKSFYGEELVETVSLKYSDPVHIYQLIKVFYPELKVQVDSNNLKLLMSGKR
KTILAARNLIDRIDVPDSLITATYVAKFINADSLENHLRRIYPGLVLSSDRDNNILLIYGSKRKVREALELVNRIDLPRK
EATFIVDINKGDVTRIEETVLNLFPDLVVEGNEASHKLIISGDKEEALKARDLIKEIDIGEEIDTEVVRVDYGNLDNLIS
VIQGLFPDIRLQSNPLKKEIIIKGNTSEVQEIVSLVNSLDIPRRQVIIEARFEEISANKISEFGMRPNLSEIQFIFDEAT
RELKSMNITWPEYLRFLEEEGQANMLANPRLLTLNGENARLLIGDKVPVKIEETSGSSEESEGESNAVSYEYIDVGISLE
FTPWITEDGYIIMDVAPEVSSLGSPMGGGESIPPIKTREARTKIRLKDGQTFAIGGLIREDELESIAKVPLLGDIPLLGT
LFRRSQTDKVKTEVVIFITPHIVKESFGDITTVDQSREKVLSNKTDEPSKKESTPDKEVVDTGGKDSENISVVSKVSRDG
EIKEGKTGSEEEVDNNLAGNKKEDSEPHTTEKEGSKGSEDEIDITSKNSTSETTENEENSEETNTGEIIKSKDDVTGEST
DDFGEKNIIEGEVNKKDVNKAEVNETEETVDEATRKELKNIINSEIIKPGNESSDNNLPEYYNILYKVKPGDTLASIARK
YGLFVSNIKLVNGIDEVKTGQTITLPIPKSHLYIIKKGETLWQIYLKFGVSVSVLQEINNIKDVRKIPAGTLIIIPKRIN
D

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=665, Percent_Identity=22.8571428571429, Blast_Score=119, Evalue=7e-28,
Organism=Escherichia coli, GI1789793, Length=264, Percent_Identity=25.3787878787879, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 98210; Mature: 98210

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTHKKLLAGLMLYLIILSIPGFAFASNGIDSHPVKVDMNFEEAEIQDVLTAIASLVNIN
CCHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHEEE
LVVDSSVSGEITVKLDNMSFKEALDYVVKVSGLDYVWKNDTVIVASSERLKSFYGEELVE
EEEECCCCCEEEEEECCCCHHHHHHHHEEECCCEEEECCCEEEEECHHHHHHHHHHHHHH
TVSLKYSDPVHIYQLIKVFYPELKVQVDSNNLKLLMSGKRKTILAARNLIDRIDVPDSLI
HHHCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHH
TATYVAKFINADSLENHLRRIYPGLVLSSDRDNNILLIYGSKRKVREALELVNRIDLPRK
HHHHHHHHHCHHHHHHHHHHHCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCC
EATFIVDINKGDVTRIEETVLNLFPDLVVEGNEASHKLIISGDKEEALKARDLIKEIDIG
CCEEEEEECCCCHHHHHHHHHHHCCHHEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCC
EEIDTEVVRVDYGNLDNLISVIQGLFPDIRLQSNPLKKEIIIKGNTSEVQEIVSLVNSLD
CCCCCEEEEEECCCHHHHHHHHHHHCCCCEECCCCCCEEEEEECCHHHHHHHHHHHHHCC
IPRRQVIIEARFEEISANKISEFGMRPNLSEIQFIFDEATRELKSMNITWPEYLRFLEEE
CCHHHEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GQANMLANPRLLTLNGENARLLIGDKVPVKIEETSGSSEESEGESNAVSYEYIDVGISLE
CCCCEECCCEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEE
FTPWITEDGYIIMDVAPEVSSLGSPMGGGESIPPIKTREARTKIRLKDGQTFAIGGLIRE
ECCEECCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCEECH
DELESIAKVPLLGDIPLLGTLFRRSQTDKVKTEVVIFITPHIVKESFGDITTVDQSREKV
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHCCCCEECHHHHHHH
LSNKTDEPSKKESTPDKEVVDTGGKDSENISVVSKVSRDGEIKEGKTGSEEEVDNNLAGN
HCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCC
KKEDSEPHTTEKEGSKGSEDEIDITSKNSTSETTENEENSEETNTGEIIKSKDDVTGEST
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
DDFGEKNIIEGEVNKKDVNKAEVNETEETVDEATRKELKNIINSEIIKPGNESSDNNLPE
CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
YYNILYKVKPGDTLASIARKYGLFVSNIKLVNGIDEVKTGQTITLPIPKSHLYIIKKGET
HEEEEEEECCCHHHHHHHHHHCHHHCCEEEECCHHHHCCCCEEEEECCCCEEEEEECCCH
LWQIYLKFGVSVSVLQEINNIKDVRKIPAGTLIIIPKRIND
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure
MKTHKKLLAGLMLYLIILSIPGFAFASNGIDSHPVKVDMNFEEAEIQDVLTAIASLVNIN
CCHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHEEE
LVVDSSVSGEITVKLDNMSFKEALDYVVKVSGLDYVWKNDTVIVASSERLKSFYGEELVE
EEEECCCCCEEEEEECCCCHHHHHHHHEEECCCEEEECCCEEEEECHHHHHHHHHHHHHH
TVSLKYSDPVHIYQLIKVFYPELKVQVDSNNLKLLMSGKRKTILAARNLIDRIDVPDSLI
HHHCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHH
TATYVAKFINADSLENHLRRIYPGLVLSSDRDNNILLIYGSKRKVREALELVNRIDLPRK
HHHHHHHHHCHHHHHHHHHHHCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCC
EATFIVDINKGDVTRIEETVLNLFPDLVVEGNEASHKLIISGDKEEALKARDLIKEIDIG
CCEEEEEECCCCHHHHHHHHHHHCCHHEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCC
EEIDTEVVRVDYGNLDNLISVIQGLFPDIRLQSNPLKKEIIIKGNTSEVQEIVSLVNSLD
CCCCCEEEEEECCCHHHHHHHHHHHCCCCEECCCCCCEEEEEECCHHHHHHHHHHHHHCC
IPRRQVIIEARFEEISANKISEFGMRPNLSEIQFIFDEATRELKSMNITWPEYLRFLEEE
CCHHHEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GQANMLANPRLLTLNGENARLLIGDKVPVKIEETSGSSEESEGESNAVSYEYIDVGISLE
CCCCEECCCEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEE
FTPWITEDGYIIMDVAPEVSSLGSPMGGGESIPPIKTREARTKIRLKDGQTFAIGGLIRE
ECCEECCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCEECH
DELESIAKVPLLGDIPLLGTLFRRSQTDKVKTEVVIFITPHIVKESFGDITTVDQSREKV
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHCCCCEECHHHHHHH
LSNKTDEPSKKESTPDKEVVDTGGKDSENISVVSKVSRDGEIKEGKTGSEEEVDNNLAGN
HCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCC
KKEDSEPHTTEKEGSKGSEDEIDITSKNSTSETTENEENSEETNTGEIIKSKDDVTGEST
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
DDFGEKNIIEGEVNKKDVNKAEVNETEETVDEATRKELKNIINSEIIKPGNESSDNNLPE
CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
YYNILYKVKPGDTLASIARKYGLFVSNIKLVNGIDEVKTGQTITLPIPKSHLYIIKKGET
HEEEEEEECCCHHHHHHHHHHCHHHCCEEEECCHHHHCCCCEEEEECCCCEEEEEECCCH
LWQIYLKFGVSVSVLQEINNIKDVRKIPAGTLIIIPKRIND
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1640836 [H]