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The map label for this gene is yrrO [H]

Identifier: 220931428

GI number: 220931428

Start: 639099

End: 640319

Strand: Direct

Name: yrrO [H]

Synonym: Hore_05840

Alternate gene names: 220931428

Gene position: 639099-640319 (Clockwise)

Preceding gene: 220931427

Following gene: 220931429

Centisome position: 24.79

GC content: 40.62

Gene sequence:

>1221_bases
GTGAAAAAAGTTGAACTACTGGCTCCGGCAGGAAATCTAGAAAAATTAAAACTGGCTATTTTATATGGTGCCGATGCTGT
TTACTGTGGTGGTTTGCGTTTTGGACTTCGTTATGGGGCTGATAACTTTACTCCTGAAGAACTGGAAGAAGGAACCAGAT
TTGTCCATAACCACGGAGGCAAAATTTATATAACGGTAAATATATATCCCCATAACAATGATCTGGCAAAGCTGCCAGAC
TATTTACATAAACTGGAAGAAATCGGGGTTGATGGTTTAATCGTGTCAGATCCCGGTGTAATTGAATTTATAAACAGGGA
AAAAATAGAGATACCTCTCCATCTCAGTACTCAGGCCAATACTGTTAACTGGGCCAGTGCCAGCTTCTGGCATAAACAGG
GTATTGAAAGAATAATTCTGGCCCGGGAATTGAGCCGTGAGGAAATAAAGGAAATTAGAGACAGAACCAGTATTTCCCTG
GAAATGTTCGTTCATGGTTCAATGTGTATTTCCTATTCTGGTCGGTGTTTATTGAGCAATTATATGGTCGGGCGTGATGC
CAACCGGGGGAAATGTGCCCATCCCTGTCGCTGGAAGTATCATCTGGTTGAGGAACAGCGACCCGGGGAATACTATCCAG
TATATGAGAATGAACAGGGAACTTTTATTATGAATTCAAAAGACCTCTGCCTTATTGAGTATTTACCAGACGTTATTTCA
ACCGGGGTAGATAGTTTAAAGATAGAGGGACGAATGAAGAGCCTTCATTATGTAGCTACTGTAACCAGGGTTTACCGTAA
GGCCATAGACTCTTATTATCATGATCCTGAAAATTTTAAGGTTAAACCTGAGTGGCTTGATGAGCTAAAGAAAGTAAGCC
ACCGGGGTTATACAACAGGGTTTTTTATCTCTCCTCCGACTGGAGAAGACCATAATTATAATTCTTCAGTATATATAAGG
GATCATGACTTTATGGGGATTATCAGGGATTATGACAAAAAGAAAAATGAGGCTGTAGTTGAAGTCAGGCATAAATTCTT
TAAAGGTGACAGGGTTGAGGTGATGGGACCGGATACAACTAATTTTGAAACAACTGTAAATTATATAATCAATGAAAACG
GGGAAGAAGTGGATGAAGCTCCCCATCCCAGGGAGCTAATACGGATACCGGTAACCCATAAGGTTAAACCCTATTACCTT
GTAAGGAGGAAAAAGTCATGA

Upstream 100 bases:

>100_bases
TTACGGAATTATTTAGATAAAATAAATAATCATAAATTATTTGATTCAACAGTAATACCTGTAGGAGATGGAATATCTTT
GAGTGTTAGGAGGAAAAACA

Downstream 100 bases:

>100_bases
CATCTCCGGATAGAGATACCCAGCGAATTAAAGTAAAAGTACCACCAGAAGAGATTGTTTTGATCGATATGATATTTAAG
GCTAGTGAAGGAATAGCCAC

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKKVELLAPAGNLEKLKLAILYGADAVYCGGLRFGLRYGADNFTPEELEEGTRFVHNHGGKIYITVNIYPHNNDLAKLPD
YLHKLEEIGVDGLIVSDPGVIEFINREKIEIPLHLSTQANTVNWASASFWHKQGIERIILARELSREEIKEIRDRTSISL
EMFVHGSMCISYSGRCLLSNYMVGRDANRGKCAHPCRWKYHLVEEQRPGEYYPVYENEQGTFIMNSKDLCLIEYLPDVIS
TGVDSLKIEGRMKSLHYVATVTRVYRKAIDSYYHDPENFKVKPEWLDELKKVSHRGYTTGFFISPPTGEDHNYNSSVYIR
DHDFMGIIRDYDKKKNEAVVEVRHKFFKGDRVEVMGPDTTNFETTVNYIINENGEEVDEAPHPRELIRIPVTHKVKPYYL
VRRKKS

Sequences:

>Translated_406_residues
MKKVELLAPAGNLEKLKLAILYGADAVYCGGLRFGLRYGADNFTPEELEEGTRFVHNHGGKIYITVNIYPHNNDLAKLPD
YLHKLEEIGVDGLIVSDPGVIEFINREKIEIPLHLSTQANTVNWASASFWHKQGIERIILARELSREEIKEIRDRTSISL
EMFVHGSMCISYSGRCLLSNYMVGRDANRGKCAHPCRWKYHLVEEQRPGEYYPVYENEQGTFIMNSKDLCLIEYLPDVIS
TGVDSLKIEGRMKSLHYVATVTRVYRKAIDSYYHDPENFKVKPEWLDELKKVSHRGYTTGFFISPPTGEDHNYNSSVYIR
DHDFMGIIRDYDKKKNEAVVEVRHKFFKGDRVEVMGPDTTNFETTVNYIINENGEEVDEAPHPRELIRIPVTHKVKPYYL
VRRKKS
>Mature_406_residues
MKKVELLAPAGNLEKLKLAILYGADAVYCGGLRFGLRYGADNFTPEELEEGTRFVHNHGGKIYITVNIYPHNNDLAKLPD
YLHKLEEIGVDGLIVSDPGVIEFINREKIEIPLHLSTQANTVNWASASFWHKQGIERIILARELSREEIKEIRDRTSISL
EMFVHGSMCISYSGRCLLSNYMVGRDANRGKCAHPCRWKYHLVEEQRPGEYYPVYENEQGTFIMNSKDLCLIEYLPDVIS
TGVDSLKIEGRMKSLHYVATVTRVYRKAIDSYYHDPENFKVKPEWLDELKKVSHRGYTTGFFISPPTGEDHNYNSSVYIR
DHDFMGIIRDYDKKKNEAVVEVRHKFFKGDRVEVMGPDTTNFETTVNYIINENGEEVDEAPHPRELIRIPVTHKVKPYYL
VRRKKS

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=451, Percent_Identity=39.689578713969, Blast_Score=285, Evalue=5e-78,
Organism=Escherichia coli, GI87081910, Length=411, Percent_Identity=30.9002433090024, Blast_Score=189, Evalue=4e-49,
Organism=Escherichia coli, GI1789548, Length=322, Percent_Identity=33.5403726708075, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 46912; Mature: 46912

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVELLAPAGNLEKLKLAILYGADAVYCGGLRFGLRYGADNFTPEELEEGTRFVHNHGG
CCCEEEECCCCCCCEEEEEEEECCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCC
KIYITVNIYPHNNDLAKLPDYLHKLEEIGVDGLIVSDPGVIEFINREKIEIPLHLSTQAN
EEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCEEEEEEEECCCCC
TVNWASASFWHKQGIERIILARELSREEIKEIRDRTSISLEMFVHGSMCISYSGRCLLSN
EEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEECCEEEECCCCEEEEE
YMVGRDANRGKCAHPCRWKYHLVEEQRPGEYYPVYENEQGTFIMNSKDLCLIEYLPDVIS
EEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEECCCCEEHHHHHHHHHH
TGVDSLKIEGRMKSLHYVATVTRVYRKAIDSYYHDPENFKVKPEWLDELKKVSHRGYTTG
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHCCCCCEE
FFISPPTGEDHNYNSSVYIRDHDFMGIIRDYDKKKNEAVVEVRHKFFKGDRVEVMGPDTT
EEECCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCC
NFETTVNYIINENGEEVDEAPHPRELIRIPVTHKVKPYYLVRRKKS
CCEEEEEEEECCCCCCCCCCCCCHHEEEECCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKKVELLAPAGNLEKLKLAILYGADAVYCGGLRFGLRYGADNFTPEELEEGTRFVHNHGG
CCCEEEECCCCCCCEEEEEEEECCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCC
KIYITVNIYPHNNDLAKLPDYLHKLEEIGVDGLIVSDPGVIEFINREKIEIPLHLSTQAN
EEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCEEEEEEEECCCCC
TVNWASASFWHKQGIERIILARELSREEIKEIRDRTSISLEMFVHGSMCISYSGRCLLSN
EEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEECCEEEECCCCEEEEE
YMVGRDANRGKCAHPCRWKYHLVEEQRPGEYYPVYENEQGTFIMNSKDLCLIEYLPDVIS
EEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEECCCCEEHHHHHHHHHH
TGVDSLKIEGRMKSLHYVATVTRVYRKAIDSYYHDPENFKVKPEWLDELKKVSHRGYTTG
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHCCCCCEE
FFISPPTGEDHNYNSSVYIRDHDFMGIIRDYDKKKNEAVVEVRHKFFKGDRVEVMGPDTT
EEECCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCC
NFETTVNYIINENGEEVDEAPHPRELIRIPVTHKVKPYYLVRRKKS
CCEEEEEEEECCCCCCCCCCCCCHHEEEECCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]