| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931400
Identifier: 220931400
GI number: 220931400
Start: 606317
End: 606922
Strand: Direct
Name: 220931400
Synonym: Hore_05560
Alternate gene names: NA
Gene position: 606317-606922 (Clockwise)
Preceding gene: 220931399
Following gene: 220931401
Centisome position: 23.52
GC content: 33.5
Gene sequence:
>606_bases ATGATTAGTGGATTTATTATTTTACCAGTGGTTGGAGCATTAATAGGTTGGATTACAAATTATCTGGCTGTTAAAATGCT TTTCAGGCCTTATAATCCGGTGAAAATTCCTTTTATACCGGTTACTATTCAGGGTGTTTTACCACGACGGAAAATGGAGC TGGCAGAAAGTGTAGCCCGGGCAATTGAAGAAGAACTCCTTCCTAAAGAATATTTATTAAGCAGGGTCAATGAACTTCAG CTTGAAGAGGATGTATTAGATATCTTAAGAAGATTAATAAATGAAAAAGTAGACGACAAATTGCCCGGGTTTATCCCTGA TTCTTTTAAACAGGTAATGAAGAATTATATTTCTGAATTTATTGAAGAAGAAATGAAAGAAAATCTGGATAGATTGGTAA ATGATTTTCATGATACGGTTGTAAACAAAACTAACTTTGGCAGGCTTGTTCAGGAAAAAATTGAGTCTTTTCCTTTAACA AGACTGGAAGATATTGTTTTAAAAATATCTTCCCGTGAATTAAAACATATTGAACTTTTCGGTGGAGTTCTTGGTTTTAT CGTGGGACTGGGACAGGCTTTGTTACTTTTATTTTTCAATTTTTAA
Upstream 100 bases:
>100_bases ATTTGATTTTTGTTTATATTGGTGTTATATTAATAATGTTATTAAACCTCTGTTTACCCGAATAGTTATTTATATATATC ATAATTGAGGATAGATATCT
Downstream 100 bases:
>100_bases CCTTGACAAGCCCGGAACAAAGTAATATAATATTATAAAATTACAGAATTTAACGGCTATGACGAGGAGAGTAGGGTAGG TTATCATTCAAAAGAGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MISGFIILPVVGALIGWITNYLAVKMLFRPYNPVKIPFIPVTIQGVLPRRKMELAESVARAIEEELLPKEYLLSRVNELQ LEEDVLDILRRLINEKVDDKLPGFIPDSFKQVMKNYISEFIEEEMKENLDRLVNDFHDTVVNKTNFGRLVQEKIESFPLT RLEDIVLKISSRELKHIELFGGVLGFIVGLGQALLLLFFNF
Sequences:
>Translated_201_residues MISGFIILPVVGALIGWITNYLAVKMLFRPYNPVKIPFIPVTIQGVLPRRKMELAESVARAIEEELLPKEYLLSRVNELQ LEEDVLDILRRLINEKVDDKLPGFIPDSFKQVMKNYISEFIEEEMKENLDRLVNDFHDTVVNKTNFGRLVQEKIESFPLT RLEDIVLKISSRELKHIELFGGVLGFIVGLGQALLLLFFNF >Mature_201_residues MISGFIILPVVGALIGWITNYLAVKMLFRPYNPVKIPFIPVTIQGVLPRRKMELAESVARAIEEELLPKEYLLSRVNELQ LEEDVLDILRRLINEKVDDKLPGFIPDSFKQVMKNYISEFIEEEMKENLDRLVNDFHDTVVNKTNFGRLVQEKIESFPLT RLEDIVLKISSRELKHIELFGGVLGFIVGLGQALLLLFFNF
Specific function: Unknown
COG id: COG4399
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0754 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007383 - InterPro: IPR016991 [H]
Pfam domain/function: PF04286 DUF445 [H]
EC number: NA
Molecular weight: Translated: 23189; Mature: 23189
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISGFIILPVVGALIGWITNYLAVKMLFRPYNPVKIPFIPVTIQGVLPRRKMELAESVAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHH AIEEELLPKEYLLSRVNELQLEEDVLDILRRLINEKVDDKLPGFIPDSFKQVMKNYISEF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IEEEMKENLDRLVNDFHDTVVNKTNFGRLVQEKIESFPLTRLEDIVLKISSRELKHIELF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GGVLGFIVGLGQALLLLFFNF HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MISGFIILPVVGALIGWITNYLAVKMLFRPYNPVKIPFIPVTIQGVLPRRKMELAESVAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHH AIEEELLPKEYLLSRVNELQLEEDVLDILRRLINEKVDDKLPGFIPDSFKQVMKNYISEF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IEEEMKENLDRLVNDFHDTVVNKTNFGRLVQEKIESFPLTRLEDIVLKISSRELKHIELF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GGVLGFIVGLGQALLLLFFNF HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]