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The map label for this gene is 220931296

Identifier: 220931296

GI number: 220931296

Start: 486034

End: 486417

Strand: Direct

Name: 220931296

Synonym: Hore_04510

Alternate gene names: NA

Gene position: 486034-486417 (Clockwise)

Preceding gene: 220931295

Following gene: 220931297

Centisome position: 18.85

GC content: 36.72

Gene sequence:

>384_bases
ATGGAATTAAAGAATGATTCTAACATACCAATCTATATCCAGATTGCAAATATGATAGAGGATCAGATATTGGAGAGGAC
CCTGGAGGAGGATGAGAAGGTTTATTCGACAAATGAACTTTCTGTCCTGCTGCATGTGAATCCGGCAACTGCCCGCAAGG
GTCTTAACTTACTGGTTAATGAGGGAATTCTTTATAAGAAAAGAGGGGTAGGTATGTTTGTAAAAAAAGGGGCAGTTGAG
ATAATTAAATCAAAAAGGAAAACAAGTTTCTTCAATGAATATATCCCTGAAATAATCAGGGAGGCAAAAAAGCTTGAAAT
TGGTAAAGATGAGTTAATTGATATGATTAAATCCTGTGAAGGAGGGGGAGTAGATGATGAGTAA

Upstream 100 bases:

>100_bases
CAGGAATATAATAGATACATAGTTGGTTACTTAAGTAATGAACTAAATATGTTTTGTATGAAAAAATACATAATGTCCGG
TATTCCGGGGAGTGATAAAG

Downstream 100 bases:

>100_bases
CTGGATATTAAACGGGGTTACAAAAAAATTTGAGGATACAACAGCCATAAACAATATATCATTGGAAATTGAAGAAAATA
AAATTTATGGGCTTATAGGA

Product: regulatory protein GntR HTH

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Regulatory Protein GntR HTH; Transcription Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator GntR Family Protein

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MELKNDSNIPIYIQIANMIEDQILERTLEEDEKVYSTNELSVLLHVNPATARKGLNLLVNEGILYKKRGVGMFVKKGAVE
IIKSKRKTSFFNEYIPEIIREAKKLEIGKDELIDMIKSCEGGGVDDE

Sequences:

>Translated_127_residues
MELKNDSNIPIYIQIANMIEDQILERTLEEDEKVYSTNELSVLLHVNPATARKGLNLLVNEGILYKKRGVGMFVKKGAVE
IIKSKRKTSFFNEYIPEIIREAKKLEIGKDELIDMIKSCEGGGVDDE
>Mature_127_residues
MELKNDSNIPIYIQIANMIEDQILERTLEEDEKVYSTNELSVLLHVNPATARKGLNLLVNEGILYKKRGVGMFVKKGAVE
IIKSKRKTSFFNEYIPEIIREAKKLEIGKDELIDMIKSCEGGGVDDE

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14429; Mature: 14429

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKNDSNIPIYIQIANMIEDQILERTLEEDEKVYSTNELSVLLHVNPATARKGLNLLVN
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHCCHHEEC
EGILYKKRGVGMFVKKGAVEIIKSKRKTSFFNEYIPEIIREAKKLEIGKDELIDMIKSCE
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
GGGVDDE
CCCCCCC
>Mature Secondary Structure
MELKNDSNIPIYIQIANMIEDQILERTLEEDEKVYSTNELSVLLHVNPATARKGLNLLVN
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHCCHHEEC
EGILYKKRGVGMFVKKGAVEIIKSKRKTSFFNEYIPEIIREAKKLEIGKDELIDMIKSCE
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
GGGVDDE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA