| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931281
Identifier: 220931281
GI number: 220931281
Start: 469064
End: 469723
Strand: Direct
Name: 220931281
Synonym: Hore_04360
Alternate gene names: NA
Gene position: 469064-469723 (Clockwise)
Preceding gene: 220931280
Following gene: 220931282
Centisome position: 18.19
GC content: 25.91
Gene sequence:
>660_bases ATGATTTTAGAAATAACAAATTATCTTACTAGGTATGAAAAGTACGAACCGGTTAACCAACATATCGATAAAAGACTTGT AAATACCTTTAGTATTATCCTTCCGATAGTATTATTTATTATTTTGAAAAAATTAAATCTGGTTTTAAGCTTTAATGCTA TTTTGTTATACCTTTATGTAAATATTTTTGTCAGAGTCAATACTCTGGCACTCCGGGTTATATCAAAAAAATATGGAGGG ATTTACGAAAACCTATTAGCTACAGGTATGGGCAGAAAACATTTAATAATTATTGAAACACTAATATATATAAAGCAAAA CTGGGTGAAGATAATCCTTTTTAATTCCTCTATTACTCTGGGATATTATTTAATAAATTTAAAATTAATGTCAGTATATA ATTTGTTAGTATTTTTACTTATAGCAAATATAATATCTATAATATTACATTTAATTGTGGGAGCAATAACAGTAATAAAT GGGATGGTCAATAATTCTTTAGCCCAGTTGATAACATTAATTGGATGGGGAAGTGGACTTGTTTTATTTTTATCCAAGCA TATTATTATAAAAATTACAGTTCCGCTAGTAGTAATTTGTTTGTTGGGTGGTTATTCTGTTATTAATATATTAATTAAAG AAGATTATGAAGTTATATAG
Upstream 100 bases:
>100_bases TATTATTATCTTTTGTCTTTTCTCTCCTGGTAGGATTTAGGGCGTACAGGAAGTTTAAAAAAACAGATAAAGAAACAATT ATTATAAGGGGAGACTATTG
Downstream 100 bases:
>100_bases TAAACAGAATGAACAATCACAGGCCAGGACACTACTTAATTTTATTGAAAGCTTTTCATAATCCCTGATAGAGGAAAATC CTTTTAAAAAAAATAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MILEITNYLTRYEKYEPVNQHIDKRLVNTFSIILPIVLFIILKKLNLVLSFNAILLYLYVNIFVRVNTLALRVISKKYGG IYENLLATGMGRKHLIIIETLIYIKQNWVKIILFNSSITLGYYLINLKLMSVYNLLVFLLIANIISIILHLIVGAITVIN GMVNNSLAQLITLIGWGSGLVLFLSKHIIIKITVPLVVICLLGGYSVINILIKEDYEVI
Sequences:
>Translated_219_residues MILEITNYLTRYEKYEPVNQHIDKRLVNTFSIILPIVLFIILKKLNLVLSFNAILLYLYVNIFVRVNTLALRVISKKYGG IYENLLATGMGRKHLIIIETLIYIKQNWVKIILFNSSITLGYYLINLKLMSVYNLLVFLLIANIISIILHLIVGAITVIN GMVNNSLAQLITLIGWGSGLVLFLSKHIIIKITVPLVVICLLGGYSVINILIKEDYEVI >Mature_219_residues MILEITNYLTRYEKYEPVNQHIDKRLVNTFSIILPIVLFIILKKLNLVLSFNAILLYLYVNIFVRVNTLALRVISKKYGG IYENLLATGMGRKHLIIIETLIYIKQNWVKIILFNSSITLGYYLINLKLMSVYNLLVFLLIANIISIILHLIVGAITVIN GMVNNSLAQLITLIGWGSGLVLFLSKHIIIKITVPLVVICLLGGYSVINILIKEDYEVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24918; Mature: 24918
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILEITNYLTRYEKYEPVNQHIDKRLVNTFSIILPIVLFIILKKLNLVLSFNAILLYLYV CEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIFVRVNTLALRVISKKYGGIYENLLATGMGRKHLIIIETLIYIKQNWVKIILFNSSITL HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCHHH GYYLINLKLMSVYNLLVFLLIANIISIILHLIVGAITVINGMVNNSLAQLITLIGWGSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VLFLSKHIIIKITVPLVVICLLGGYSVINILIKEDYEVI HHHHHCHHEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCC >Mature Secondary Structure MILEITNYLTRYEKYEPVNQHIDKRLVNTFSIILPIVLFIILKKLNLVLSFNAILLYLYV CEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIFVRVNTLALRVISKKYGGIYENLLATGMGRKHLIIIETLIYIKQNWVKIILFNSSITL HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCHHH GYYLINLKLMSVYNLLVFLLIANIISIILHLIVGAITVINGMVNNSLAQLITLIGWGSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VLFLSKHIIIKITVPLVVICLLGGYSVINILIKEDYEVI HHHHHCHHEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA