| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220931280
Identifier: 220931280
GI number: 220931280
Start: 468378
End: 469064
Strand: Direct
Name: 220931280
Synonym: Hore_04350
Alternate gene names: NA
Gene position: 468378-469064 (Clockwise)
Preceding gene: 220931279
Following gene: 220931281
Centisome position: 18.17
GC content: 31.15
Gene sequence:
>687_bases TTGAGTATATTAACTAAAGAATTCAGGCTTCTTTATGGTAATAAAGTGTTTTTGTTGTGCTTTCTCTTTTTTACATTAAT TTATTCTGCGATTGGATATGGAGCCAGATATGTATATGAAGAGGTTGTTAATGATTTAAATGTGGTATATTACTTTATAT TTGTATATTCTATGTCATTAACTTTACTTATGCTTCAGGTTTATCCAGCATCCAATGATATTAGAGAACAGGCCTATGGT GGTGTTGAAAATATTCTGGCTACAGGTTACCCTTTAAGTAAGTTAATATTACATAAAATGTTACCAATATTTAGCGCCCT ATATCTCCCATCATCAATAATGGTTGTAATTATTATAATATGGAGTAAGTTGTACCTAGCGGGGCTGGTTGCTTTATTAT GTATATTACCGGTAATCAATGCTGGATTATCTTTAATTTATACCTGTACAGTTCTTCTATCTCCCATTCCTGGTATGGTA ATGAATCAGATATCTTTTTATGCAGTAGCTGGTATTTTCCTTTTAAGTTATGGTCCGGTATTGATTTATAGAACTACTGG TTATGTTGTAGGAATTAAAGTAAGTATATTATTATCTTTTGTCTTTTCTCTCCTGGTAGGATTTAGGGCGTACAGGAAGT TTAAAAAAACAGATAAAGAAACAATTATTATAAGGGGAGACTATTGA
Upstream 100 bases:
>100_bases TAATAAGGGATGGGATGATTGTCAAACAATATAGAAAAAATGAATTACCAACAGATGTCTCCCTTGAAGATCTTTATTTG AAGTCTGGTGGTGAAATGTC
Downstream 100 bases:
>100_bases TGATTTTAGAAATAACAAATTATCTTACTAGGTATGAAAAGTACGAACCGGTTAACCAACATATCGATAAAAGACTTGTA AATACCTTTAGTATTATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSILTKEFRLLYGNKVFLLCFLFFTLIYSAIGYGARYVYEEVVNDLNVVYYFIFVYSMSLTLLMLQVYPASNDIREQAYG GVENILATGYPLSKLILHKMLPIFSALYLPSSIMVVIIIIWSKLYLAGLVALLCILPVINAGLSLIYTCTVLLSPIPGMV MNQISFYAVAGIFLLSYGPVLIYRTTGYVVGIKVSILLSFVFSLLVGFRAYRKFKKTDKETIIIRGDY
Sequences:
>Translated_228_residues MSILTKEFRLLYGNKVFLLCFLFFTLIYSAIGYGARYVYEEVVNDLNVVYYFIFVYSMSLTLLMLQVYPASNDIREQAYG GVENILATGYPLSKLILHKMLPIFSALYLPSSIMVVIIIIWSKLYLAGLVALLCILPVINAGLSLIYTCTVLLSPIPGMV MNQISFYAVAGIFLLSYGPVLIYRTTGYVVGIKVSILLSFVFSLLVGFRAYRKFKKTDKETIIIRGDY >Mature_227_residues SILTKEFRLLYGNKVFLLCFLFFTLIYSAIGYGARYVYEEVVNDLNVVYYFIFVYSMSLTLLMLQVYPASNDIREQAYGG VENILATGYPLSKLILHKMLPIFSALYLPSSIMVVIIIIWSKLYLAGLVALLCILPVINAGLSLIYTCTVLLSPIPGMVM NQISFYAVAGIFLLSYGPVLIYRTTGYVVGIKVSILLSFVFSLLVGFRAYRKFKKTDKETIIIRGDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25747; Mature: 25616
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILTKEFRLLYGNKVFLLCFLFFTLIYSAIGYGARYVYEEVVNDLNVVYYFIFVYSMSL CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLMLQVYPASNDIREQAYGGVENILATGYPLSKLILHKMLPIFSALYLPSSIMVVIIII HHHHHHHCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH WSKLYLAGLVALLCILPVINAGLSLIYTCTVLLSPIPGMVMNQISFYAVAGIFLLSYGPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCE LIYRTTGYVVGIKVSILLSFVFSLLVGFRAYRKFKKTDKETIIIRGDY EEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure SILTKEFRLLYGNKVFLLCFLFFTLIYSAIGYGARYVYEEVVNDLNVVYYFIFVYSMSL CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLMLQVYPASNDIREQAYGGVENILATGYPLSKLILHKMLPIFSALYLPSSIMVVIIII HHHHHHHCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH WSKLYLAGLVALLCILPVINAGLSLIYTCTVLLSPIPGMVMNQISFYAVAGIFLLSYGPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCE LIYRTTGYVVGIKVSILLSFVFSLLVGFRAYRKFKKTDKETIIIRGDY EEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA