| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931268
Identifier: 220931268
GI number: 220931268
Start: 448226
End: 450055
Strand: Direct
Name: 220931268
Synonym: Hore_04230
Alternate gene names: NA
Gene position: 448226-450055 (Clockwise)
Preceding gene: 220931267
Following gene: 220931269
Centisome position: 17.39
GC content: 37.27
Gene sequence:
>1830_bases ATGAAGAAGTTGTCAATTCTGGCGATTTTGTTGGTAGGGTTACTGGTCCTGGCTGGTTGTAGTAAAGATGCAAATGATGT CAATAGTGCTGTTAAACATACTTTAACAGTAACTGTTACAGATGAAGCCACTCAAGCTGCAATTGAAGGAGCAACAGTAA CAGTTGATGAGGCAAGTAAAACTACAGATGCAAATGGTGTAGCTCAGTTTGAATTAACAGATGGAACCTATGATATAACT GTAACAGCTGAGGGATATGAAAGTAAATCAGGTTCAGTTACAATTGATGGGAAAGACTCCACTCTTGATGTAACATTAAC TGCTGGTACTGGTGGATCAACAGATTTTGTCCTGATTACTTCTAATAGTGGTGAGGAAACTGATATATATGTTGACTGGG ATTATGATAATAATATAGGGAATATTGCTGCAGATGCCTGGGGGTCAGGAACAACTATAACTCAAGATTCTAGTTATAAT AATACACCTTGCTGGGAATTAACTACAGGAGATGGCTGGGGTACTGTATTAGCTTTTATGGGAGATATCTATAATGTAGA TCAAATTGCAGAGTTCCCGGTAGATTTAACAGCTGACAGTGTTATCAGCTTTTCTGTAGCGACTACAGGCGATTATGATG AATTGAGAGTAAAAGTAGTGGGTGAAGAAAACGAAAAAGAAATAGCCATAGATAGTTTTGACAATACAAGTACTGACTGG CAGACTGTACAGGTTACTACTGATCAGTTTTCAGAAGTAGTCCCGGCAAATGTGACTCAAATAGCAATAATTGCTTTTGG TGGAACAGCTGGAACTTCCAAAGTTTATGTAACAGATTATACAATCAGTAATGCAGAGGTTGTAATTCCAAAGCCACAAC CTGAAACTTATACATTAACAGTAACTGTAACAGATGATAGTCAAGTTGCAATTGAAGGTGCCACAGTAACAGTTAACGGG ACAAGTAAAACAACAGATGCAAGTGGTGTGGCTACATTTGATTTGCCAGATGGAACTTATACAGTAAATGTAAGTGCTGA TGGCTATGCTAATGGTTCAGGTTCAGTAACTATTGATGGAGCAGATAAGTCTGTAGATGTATCATTAACAAGTCTTGAAG TCACTTCTACTTTGACAGTAAATGTTAAAAATGCTGTCAGTGGAGCAGTAATTGAAGGAGCAGCAGTAACAGTTGATGGA ACTGAAATTGTAACAGATGCAAATGGAGTAGCTCAGTTTGATTTAGTAGATGGGGATTACACAATTAATGTAAGTGCGAA TGGTTATAATACTGTTTCTCAAGATGTAACAATAGCTGGAGCTGATAAAACTGTAGATATATCTTTAACTACAGATGCTC CGTCTTTATTTAATAGCAGCTTTACAGTATTTAATGAAGCTCCAATAACAGCTCTGCAAGCTAGTTATGAAGTATCAACT ACAGAAATAACAGAAGGTGATAGTTCAATCAAGGTAACATATCCAGGAGATAACTGGGGAGGAATTTATGTAGAAATTTC TACTCCAGTAGATTTAAGTTCATATGATGGAGGTAATTTAGTATTTGATATTAAATTGCCCACTACTATAAAAGATATTG GTGTAAAGTTAGAAGGGCCAAAAGGAACAGGAGTGCAGGTGCAACTCGCTAACTATACCGGAACTGATGCTGGAAATGGA TGGATGACCTATACAATTCCTTTATCAGATTTAGGTATAGACTTAACTCAAGTAGCAGTAGGCTTTGGGTTATGGAATCC AACAGATGGAACAGCACTTGATGCCTGGGCAGGTGGAGATGTTTATATTGATAATGTAAGGTTTGAATAA
Upstream 100 bases:
>100_bases TGGCAGTTTTCTGGATTATGTCCTATTATTAGGATTTAACTTAATTCTATATTTTAATAGATTTATACGGTAACACCATT ATATGACAGGGGGTAAAAAA
Downstream 100 bases:
>100_bases GTATTAAAGTAAATTTTAGTTCCACCAACATCACCGGGCTTAAACACCCGGTGATGTTGGTGAATATTTAAATATTTAAA GGAATTTATAAAGAAACACG
Product: Cna B domain-containing protein
Products: NA
Alternate protein names: Laminarinase; Cna B Domain Protein
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MKKLSILAILLVGLLVLAGCSKDANDVNSAVKHTLTVTVTDEATQAAIEGATVTVDEASKTTDANGVAQFELTDGTYDIT VTAEGYESKSGSVTIDGKDSTLDVTLTAGTGGSTDFVLITSNSGEETDIYVDWDYDNNIGNIAADAWGSGTTITQDSSYN NTPCWELTTGDGWGTVLAFMGDIYNVDQIAEFPVDLTADSVISFSVATTGDYDELRVKVVGEENEKEIAIDSFDNTSTDW QTVQVTTDQFSEVVPANVTQIAIIAFGGTAGTSKVYVTDYTISNAEVVIPKPQPETYTLTVTVTDDSQVAIEGATVTVNG TSKTTDASGVATFDLPDGTYTVNVSADGYANGSGSVTIDGADKSVDVSLTSLEVTSTLTVNVKNAVSGAVIEGAAVTVDG TEIVTDANGVAQFDLVDGDYTINVSANGYNTVSQDVTIAGADKTVDISLTTDAPSLFNSSFTVFNEAPITALQASYEVST TEITEGDSSIKVTYPGDNWGGIYVEISTPVDLSSYDGGNLVFDIKLPTTIKDIGVKLEGPKGTGVQVQLANYTGTDAGNG WMTYTIPLSDLGIDLTQVAVGFGLWNPTDGTALDAWAGGDVYIDNVRFE
Sequences:
>Translated_609_residues MKKLSILAILLVGLLVLAGCSKDANDVNSAVKHTLTVTVTDEATQAAIEGATVTVDEASKTTDANGVAQFELTDGTYDIT VTAEGYESKSGSVTIDGKDSTLDVTLTAGTGGSTDFVLITSNSGEETDIYVDWDYDNNIGNIAADAWGSGTTITQDSSYN NTPCWELTTGDGWGTVLAFMGDIYNVDQIAEFPVDLTADSVISFSVATTGDYDELRVKVVGEENEKEIAIDSFDNTSTDW QTVQVTTDQFSEVVPANVTQIAIIAFGGTAGTSKVYVTDYTISNAEVVIPKPQPETYTLTVTVTDDSQVAIEGATVTVNG TSKTTDASGVATFDLPDGTYTVNVSADGYANGSGSVTIDGADKSVDVSLTSLEVTSTLTVNVKNAVSGAVIEGAAVTVDG TEIVTDANGVAQFDLVDGDYTINVSANGYNTVSQDVTIAGADKTVDISLTTDAPSLFNSSFTVFNEAPITALQASYEVST TEITEGDSSIKVTYPGDNWGGIYVEISTPVDLSSYDGGNLVFDIKLPTTIKDIGVKLEGPKGTGVQVQLANYTGTDAGNG WMTYTIPLSDLGIDLTQVAVGFGLWNPTDGTALDAWAGGDVYIDNVRFE >Mature_609_residues MKKLSILAILLVGLLVLAGCSKDANDVNSAVKHTLTVTVTDEATQAAIEGATVTVDEASKTTDANGVAQFELTDGTYDIT VTAEGYESKSGSVTIDGKDSTLDVTLTAGTGGSTDFVLITSNSGEETDIYVDWDYDNNIGNIAADAWGSGTTITQDSSYN NTPCWELTTGDGWGTVLAFMGDIYNVDQIAEFPVDLTADSVISFSVATTGDYDELRVKVVGEENEKEIAIDSFDNTSTDW QTVQVTTDQFSEVVPANVTQIAIIAFGGTAGTSKVYVTDYTISNAEVVIPKPQPETYTLTVTVTDDSQVAIEGATVTVNG TSKTTDASGVATFDLPDGTYTVNVSADGYANGSGSVTIDGADKSVDVSLTSLEVTSTLTVNVKNAVSGAVIEGAAVTVDG TEIVTDANGVAQFDLVDGDYTINVSANGYNTVSQDVTIAGADKTVDISLTTDAPSLFNSSFTVFNEAPITALQASYEVST TEITEGDSSIKVTYPGDNWGGIYVEISTPVDLSSYDGGNLVFDIKLPTTIKDIGVKLEGPKGTGVQVQLANYTGTDAGNG WMTYTIPLSDLGIDLTQVAVGFGLWNPTDGTALDAWAGGDVYIDNVRFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63575; Mature: 63575
Theoretical pI: Translated: 3.52; Mature: 3.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSILAILLVGLLVLAGCSKDANDVNSAVKHTLTVTVTDEATQAAIEGATVTVDEASK CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEEEECCHHHHHHCCCEEEEECCCC TTDANGVAQFELTDGTYDITVTAEGYESKSGSVTIDGKDSTLDVTLTAGTGGSTDFVLIT CCCCCCEEEEEECCCEEEEEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEEE SNSGEETDIYVDWDYDNNIGNIAADAWGSGTTITQDSSYNNTPCWELTTGDGWGTVLAFM CCCCCCEEEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHH GDIYNVDQIAEFPVDLTADSVISFSVATTGDYDELRVKVVGEENEKEIAIDSFDNTSTDW CCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCE QTVQVTTDQFSEVVPANVTQIAIIAFGGTAGTSKVYVTDYTISNAEVVIPKPQPETYTLT EEEEEEHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCEEEEE VTVTDDSQVAIEGATVTVNGTSKTTDASGVATFDLPDGTYTVNVSADGYANGSGSVTIDG EEEECCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECC ADKSVDVSLTSLEVTSTLTVNVKNAVSGAVIEGAAVTVDGTEIVTDANGVAQFDLVDGDY CCCEEEEEEEEEEEEEEEEEEECCCCCCEEEECEEEEECCCEEEECCCCEEEEEEECCCE TINVSANGYNTVSQDVTIAGADKTVDISLTTDAPSLFNSSFTVFNEAPITALQASYEVST EEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCHHHCCCEEEEECCCCEEEEEEEEEEE TEITEGDSSIKVTYPGDNWGGIYVEISTPVDLSSYDGGNLVFDIKLPTTIKDIGVKLEGP EEEECCCCEEEEEECCCCCCEEEEEEECCEEECCCCCCCEEEEEECCCEEHHCCEEEECC KGTGVQVQLANYTGTDAGNGWMTYTIPLSDLGIDLTQVAVGFGLWNPTDGTALDAWAGGD CCCCEEEEEECCCCCCCCCCEEEEEEEHHHCCCCHHHEEEEECCCCCCCCCEEEEECCCC VYIDNVRFE EEEEEEEEC >Mature Secondary Structure MKKLSILAILLVGLLVLAGCSKDANDVNSAVKHTLTVTVTDEATQAAIEGATVTVDEASK CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEEEECCHHHHHHCCCEEEEECCCC TTDANGVAQFELTDGTYDITVTAEGYESKSGSVTIDGKDSTLDVTLTAGTGGSTDFVLIT CCCCCCEEEEEECCCEEEEEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEEE SNSGEETDIYVDWDYDNNIGNIAADAWGSGTTITQDSSYNNTPCWELTTGDGWGTVLAFM CCCCCCEEEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHH GDIYNVDQIAEFPVDLTADSVISFSVATTGDYDELRVKVVGEENEKEIAIDSFDNTSTDW CCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCE QTVQVTTDQFSEVVPANVTQIAIIAFGGTAGTSKVYVTDYTISNAEVVIPKPQPETYTLT EEEEEEHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCEEEEE VTVTDDSQVAIEGATVTVNGTSKTTDASGVATFDLPDGTYTVNVSADGYANGSGSVTIDG EEEECCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECC ADKSVDVSLTSLEVTSTLTVNVKNAVSGAVIEGAAVTVDGTEIVTDANGVAQFDLVDGDY CCCEEEEEEEEEEEEEEEEEEECCCCCCEEEECEEEEECCCEEEECCCCEEEEEEECCCE TINVSANGYNTVSQDVTIAGADKTVDISLTTDAPSLFNSSFTVFNEAPITALQASYEVST EEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCHHHCCCEEEEECCCCEEEEEEEEEEE TEITEGDSSIKVTYPGDNWGGIYVEISTPVDLSSYDGGNLVFDIKLPTTIKDIGVKLEGP EEEECCCCEEEEEECCCCCCEEEEEEECCEEECCCCCCCEEEEEECCCEEHHCCEEEECC KGTGVQVQLANYTGTDAGNGWMTYTIPLSDLGIDLTQVAVGFGLWNPTDGTALDAWAGGD CCCCEEEEEECCCCCCCCCCEEEEEEEHHHCCCCHHHEEEEECCCCCCCCCEEEEECCCC VYIDNVRFE EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA