| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931267
Identifier: 220931267
GI number: 220931267
Start: 446205
End: 448079
Strand: Direct
Name: 220931267
Synonym: Hore_04220
Alternate gene names: NA
Gene position: 446205-448079 (Clockwise)
Preceding gene: 220931266
Following gene: 220931268
Centisome position: 17.31
GC content: 35.89
Gene sequence:
>1875_bases ATGAAAAAGTTTCCTGTACTACTTAGTTTGGTGCTGGTTCTGTTATTAGCATTACCTGCCTTTGCAGTAACTAATGTAGA GTTCAGTGGGAATGCTAACTTTAATTTCTGGGAGTTTTATGAAGTAGATGGCAAAGCCAATTATTCGATGAATGGTATCC CAGGAGCAGTATTTGGAATTGGTGATTATAAACAATCCACCAGTGATAATAAGGATGATAACCGGGAAAGGTTAGAAATG GGTTTAAATCTGAATATGAATGTTAAGGTTGATAACATAGTCAATATTGATGCTAATTTTGTTGGATTACATGAAGAGAT GAATATGGACTATAACGGAACAGACGAGACATATAGTCAGGACCAGACTACTCCGAAGGATAATGCAGTTTTAAGATTAG GGGATCTTACAATAACTGCTACACCAGAATTTGGAGAAATAATTATTACTAATAATTTTAATTACAATTTTAATAATAAG GTCCTTGCTGCCCAGTTTCGTGATAACTGGGGTGATATGTCTCCTTATGGTGAAGGTATATTGATTAAGAAAGATATTGC TGGAATTTCTACTCAGAGCTTTCTGTATAAAACTGAAATTAATAGTAATGATCGCGAACAAGTTGATTTTTGGAACCCAA ATTTAGAAGTCCAACAGATGGTATATGGTGTAGACCTGAAAAAAAATATTTCCCTGGGCAAGGTTGGAGCACTTCTGGTT AGAACACATGATGAACGTGCTGATGAAGCGGGAAGTTATTTTGGTAAAGACCTTGATAATACCCATATTGCTTTAACCGG TGAACTCTATCCTAATAATATGGTCAAAATTAACGGAGAATTTATTACAGCTATTTATGGTGATGATGTAGATACTATTT ATAATACAGTTCCCTACGGTTGGATACCAGAACCTCAAGAGTTTGATTTATCAGCACCTGGGGCTAAAGAAGATACTAAT GTAATTGAAGTGGGAGCTACTATAACTCCAATTGCTGGATTACAGCTGACAGGGACTTATAAAGATGTAGGTGAAGATTA TATTGCAGTACAGGGTAACTCTCATGCACGACAGTCATGGTTTGGAGATGAGTCATTTGGTCCTGACCAGAGGTTTGATT ATGTAGATGGTTGTGGTTATGAAAAAGGGTTTAAGTTAGATGGTAGTTATATGTTACCAGTTAATTTAGCTCCACAGATT ACCGGGATGTTTACCCAGTATGAAGAGACCCGTAGTGCATTAAACGATGCTGCTGATAATAGTGTAACCATTGCCAGAGT TGAGACAAATGTTTCTGGTGCTTTGTGGAAAGCAGATACCTCTTATAGATGGAGAAATAATAAGGCTGCTACTGAAAATA ATGGTATTTTATTTAATGAGTTTAATGTAAATGGTAGTTATACAGTATTAGATGACGGTATAACAAAAGTTGGTTTAACT GGTGAAGTTAATTATTATACGGGTAGTGATGAAGAGGTTGAAGATAATAAAAACTTTGCTAACGAAATCCGGGTTAGAGC TGGTGTTAATGGTAGCTATAAGTTAAATAACAGGGTTGATTTGACTGCCAGCTATGACTTTGGTATAGCCAGAGAAGATA GTGATCTATTAACAGGTAGTGCTATGCAAAACCTATTTAAGGCTGGATTAAGTTATAAGGTTAGTCAAAACACTACTTTT ACTATTGGTTATCAGTTTGATGCTTATCAACTGAATGATATTAATGACCCTGATGATGATTTTGTTACTGCAATGAGCAA AAGAGAGGCCCATCATATATGGTATGATGGTGCGGAAAGCTGGCAACCTAGAAATCCAGACTATGAAGGTTATACAACTC ACTCAGTTAAAGCCTCTTACAATATAACATTCTAG
Upstream 100 bases:
>100_bases GTTAAAATTTATTTTATATAAAAATTATTTTCATAAGATTATAAGGATTTTATATAAGATTATGATTAAAAAAATTCAGA CTCAAGGGAGGAAAATGTAA
Downstream 100 bases:
>100_bases AAGTTATATTGCCACGGTGTTCAGGTAAAGATACCTGAACACCCGATGGCAGTTTTCTGGATTATGTCCTATTATTAGGA TTTAACTTAATTCTATATTT
Product: Autotransporter beta-domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MKKFPVLLSLVLVLLLALPAFAVTNVEFSGNANFNFWEFYEVDGKANYSMNGIPGAVFGIGDYKQSTSDNKDDNRERLEM GLNLNMNVKVDNIVNIDANFVGLHEEMNMDYNGTDETYSQDQTTPKDNAVLRLGDLTITATPEFGEIIITNNFNYNFNNK VLAAQFRDNWGDMSPYGEGILIKKDIAGISTQSFLYKTEINSNDREQVDFWNPNLEVQQMVYGVDLKKNISLGKVGALLV RTHDERADEAGSYFGKDLDNTHIALTGELYPNNMVKINGEFITAIYGDDVDTIYNTVPYGWIPEPQEFDLSAPGAKEDTN VIEVGATITPIAGLQLTGTYKDVGEDYIAVQGNSHARQSWFGDESFGPDQRFDYVDGCGYEKGFKLDGSYMLPVNLAPQI TGMFTQYEETRSALNDAADNSVTIARVETNVSGALWKADTSYRWRNNKAATENNGILFNEFNVNGSYTVLDDGITKVGLT GEVNYYTGSDEEVEDNKNFANEIRVRAGVNGSYKLNNRVDLTASYDFGIAREDSDLLTGSAMQNLFKAGLSYKVSQNTTF TIGYQFDAYQLNDINDPDDDFVTAMSKREAHHIWYDGAESWQPRNPDYEGYTTHSVKASYNITF
Sequences:
>Translated_624_residues MKKFPVLLSLVLVLLLALPAFAVTNVEFSGNANFNFWEFYEVDGKANYSMNGIPGAVFGIGDYKQSTSDNKDDNRERLEM GLNLNMNVKVDNIVNIDANFVGLHEEMNMDYNGTDETYSQDQTTPKDNAVLRLGDLTITATPEFGEIIITNNFNYNFNNK VLAAQFRDNWGDMSPYGEGILIKKDIAGISTQSFLYKTEINSNDREQVDFWNPNLEVQQMVYGVDLKKNISLGKVGALLV RTHDERADEAGSYFGKDLDNTHIALTGELYPNNMVKINGEFITAIYGDDVDTIYNTVPYGWIPEPQEFDLSAPGAKEDTN VIEVGATITPIAGLQLTGTYKDVGEDYIAVQGNSHARQSWFGDESFGPDQRFDYVDGCGYEKGFKLDGSYMLPVNLAPQI TGMFTQYEETRSALNDAADNSVTIARVETNVSGALWKADTSYRWRNNKAATENNGILFNEFNVNGSYTVLDDGITKVGLT GEVNYYTGSDEEVEDNKNFANEIRVRAGVNGSYKLNNRVDLTASYDFGIAREDSDLLTGSAMQNLFKAGLSYKVSQNTTF TIGYQFDAYQLNDINDPDDDFVTAMSKREAHHIWYDGAESWQPRNPDYEGYTTHSVKASYNITF >Mature_624_residues MKKFPVLLSLVLVLLLALPAFAVTNVEFSGNANFNFWEFYEVDGKANYSMNGIPGAVFGIGDYKQSTSDNKDDNRERLEM GLNLNMNVKVDNIVNIDANFVGLHEEMNMDYNGTDETYSQDQTTPKDNAVLRLGDLTITATPEFGEIIITNNFNYNFNNK VLAAQFRDNWGDMSPYGEGILIKKDIAGISTQSFLYKTEINSNDREQVDFWNPNLEVQQMVYGVDLKKNISLGKVGALLV RTHDERADEAGSYFGKDLDNTHIALTGELYPNNMVKINGEFITAIYGDDVDTIYNTVPYGWIPEPQEFDLSAPGAKEDTN VIEVGATITPIAGLQLTGTYKDVGEDYIAVQGNSHARQSWFGDESFGPDQRFDYVDGCGYEKGFKLDGSYMLPVNLAPQI TGMFTQYEETRSALNDAADNSVTIARVETNVSGALWKADTSYRWRNNKAATENNGILFNEFNVNGSYTVLDDGITKVGLT GEVNYYTGSDEEVEDNKNFANEIRVRAGVNGSYKLNNRVDLTASYDFGIAREDSDLLTGSAMQNLFKAGLSYKVSQNTTF TIGYQFDAYQLNDINDPDDDFVTAMSKREAHHIWYDGAESWQPRNPDYEGYTTHSVKASYNITF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69718; Mature: 69718
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFPVLLSLVLVLLLALPAFAVTNVEFSGNANFNFWEFYEVDGKANYSMNGIPGAVFGI CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEC GDYKQSTSDNKDDNRERLEMGLNLNMNVKVDNIVNIDANFVGLHEEMNMDYNGTDETYSQ CCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCEEEECCCEEEEHHHCCCCCCCCCCCCCC DQTTPKDNAVLRLGDLTITATPEFGEIIITNNFNYNFNNKVLAAQFRDNWGDMSPYGEGI CCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEE LIKKDIAGISTQSFLYKTEINSNDREQVDFWNPNLEVQQMVYGVDLKKNISLGKVGALLV EEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEE RTHDERADEAGSYFGKDLDNTHIALTGELYPNNMVKINGEFITAIYGDDVDTIYNTVPYG EECCHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCEEEEEEECCCHHHHHHCCCCC WIPEPQEFDLSAPGAKEDTNVIEVGATITPIAGLQLTGTYKDVGEDYIAVQGNSHARQSW CCCCCCCCCCCCCCCCCCCCEEEECCEECCCCCEEEECCHHHCCCCEEEEECCCCHHHCC FGDESFGPDQRFDYVDGCGYEKGFKLDGSYMLPVNLAPQITGMFTQYEETRSALNDAADN CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC SVTIARVETNVSGALWKADTSYRWRNNKAATENNGILFNEFNVNGSYTVLDDGITKVGLT CEEEEEEEECCCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEE GEVNYYTGSDEEVEDNKNFANEIRVRAGVNGSYKLNNRVDLTASYDFGIAREDSDLLTGS EEEEEECCCCCCCCCCCCCHHEEEEEECCCCCEEECCEEEEEEECCCCEECCCCCCCCHH AMQNLFKAGLSYKVSQNTTFTIGYQFDAYQLNDINDPDDDFVTAMSKREAHHIWYDGAES HHHHHHHCCCEEEEECCCEEEEEEEECCEEECCCCCCCHHHHHHHHHCCCCEEEECCCCC WQPRNPDYEGYTTHSVKASYNITF CCCCCCCCCCEEEEEEEEEEEEEC >Mature Secondary Structure MKKFPVLLSLVLVLLLALPAFAVTNVEFSGNANFNFWEFYEVDGKANYSMNGIPGAVFGI CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEC GDYKQSTSDNKDDNRERLEMGLNLNMNVKVDNIVNIDANFVGLHEEMNMDYNGTDETYSQ CCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCEEEECCCEEEEHHHCCCCCCCCCCCCCC DQTTPKDNAVLRLGDLTITATPEFGEIIITNNFNYNFNNKVLAAQFRDNWGDMSPYGEGI CCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEE LIKKDIAGISTQSFLYKTEINSNDREQVDFWNPNLEVQQMVYGVDLKKNISLGKVGALLV EEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEE RTHDERADEAGSYFGKDLDNTHIALTGELYPNNMVKINGEFITAIYGDDVDTIYNTVPYG EECCHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCEEEEEEECCCHHHHHHCCCCC WIPEPQEFDLSAPGAKEDTNVIEVGATITPIAGLQLTGTYKDVGEDYIAVQGNSHARQSW CCCCCCCCCCCCCCCCCCCCEEEECCEECCCCCEEEECCHHHCCCCEEEEECCCCHHHCC FGDESFGPDQRFDYVDGCGYEKGFKLDGSYMLPVNLAPQITGMFTQYEETRSALNDAADN CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC SVTIARVETNVSGALWKADTSYRWRNNKAATENNGILFNEFNVNGSYTVLDDGITKVGLT CEEEEEEEECCCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEE GEVNYYTGSDEEVEDNKNFANEIRVRAGVNGSYKLNNRVDLTASYDFGIAREDSDLLTGS EEEEEECCCCCCCCCCCCCHHEEEEEECCCCCEEECCEEEEEEECCCCEECCCCCCCCHH AMQNLFKAGLSYKVSQNTTFTIGYQFDAYQLNDINDPDDDFVTAMSKREAHHIWYDGAES HHHHHHHCCCEEEEECCCEEEEEEEECCEEECCCCCCCHHHHHHHHHCCCCEEEECCCCC WQPRNPDYEGYTTHSVKASYNITF CCCCCCCCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA