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The map label for this gene is ccmE [C]

Identifier: 220931222

GI number: 220931222

Start: 388247

End: 388633

Strand: Direct

Name: ccmE [C]

Synonym: Hore_03750

Alternate gene names: 220931222

Gene position: 388247-388633 (Clockwise)

Preceding gene: 220931221

Following gene: 220931223

Centisome position: 15.06

GC content: 32.04

Gene sequence:

>387_bases
ATGAAAACTAAAACAAAAGTTATTATTCTCACATTAATAATTGTTTTAGTGGTTTCATACACAACATATATAAGTTTTAA
CAATTCAGCAACATATTATTATACCATATCTGAGGCCAGAGGATTAGAAGGTATCAGACAGCATCTCAGAATTAAAGGTA
ATCTTATTAAAGACAGTGTTAAATGGTCCCCGGATCTCTCAGAACTTAAATTTACTTTGACAGATGGTCAGCATAATTTA
AAAATGATCTATTCCGGAGTAGTTCCGGATAATTTTAAACACTCCCGGGAAGTGATTGTAGAGGGTAAATTTATTGAAAA
TGATGTATTCAGGGTCACAAAACTTATGCTACAGTGCCCATCTAAATATGAAAAGGGAGAAGAATAA

Upstream 100 bases:

>100_bases
TATGTAAAAAAGTACAAAACTTTGTGAAATAAGGTACGGTTAAAATCAATTGTTCAGTAATACAGGTTTTATAACAATTA
ATTGACTGGGGAAGGATAAT

Downstream 100 bases:

>100_bases
TGATTTCAACTGGTGACTTATCTATACTACTGGCCTCTATTTTTACTGTTATATCAATAATAACAGCCGTTATATGTTTC
TGGAAGGAAGAGAAGGCCGG

Product: putative cytochrome c-type biogenesis protein CcmE

Products: NA

Alternate protein names: CcmE/CycJ Protein

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKTKTKVIILTLIIVLVVSYTTYISFNNSATYYYTISEARGLEGIRQHLRIKGNLIKDSVKWSPDLSELKFTLTDGQHNL
KMIYSGVVPDNFKHSREVIVEGKFIENDVFRVTKLMLQCPSKYEKGEE

Sequences:

>Translated_128_residues
MKTKTKVIILTLIIVLVVSYTTYISFNNSATYYYTISEARGLEGIRQHLRIKGNLIKDSVKWSPDLSELKFTLTDGQHNL
KMIYSGVVPDNFKHSREVIVEGKFIENDVFRVTKLMLQCPSKYEKGEE
>Mature_128_residues
MKTKTKVIILTLIIVLVVSYTTYISFNNSATYYYTISEARGLEGIRQHLRIKGNLIKDSVKWSPDLSELKFTLTDGQHNL
KMIYSGVVPDNFKHSREVIVEGKFIENDVFRVTKLMLQCPSKYEKGEE

Specific function: Required For The Biogenesis Of C-Type Cytochromes. Possible Subunit Of A Heme Lyase. [C]

COG id: COG2332

COG function: function code O; Cytochrome c-type biogenesis protein CcmE

Gene ontology:

Cell location: Mostly Periplasmic Protein; Anchored In The Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14765; Mature: 14765

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKTKVIILTLIIVLVVSYTTYISFNNSATYYYTISEARGLEGIRQHLRIKGNLIKDSV
CCCCHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCEECCCC
KWSPDLSELKFTLTDGQHNLKMIYSGVVPDNFKHSREVIVEGKFIENDVFRVTKLMLQCP
CCCCCHHHEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECEECCHHHHHHHHHHHHCC
SKYEKGEE
CCCCCCCC
>Mature Secondary Structure
MKTKTKVIILTLIIVLVVSYTTYISFNNSATYYYTISEARGLEGIRQHLRIKGNLIKDSV
CCCCHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCEECCCC
KWSPDLSELKFTLTDGQHNLKMIYSGVVPDNFKHSREVIVEGKFIENDVFRVTKLMLQCP
CCCCCHHHEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECEECCHHHHHHHHHHHHCC
SKYEKGEE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA