| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is ansB [H]
Identifier: 220931163
GI number: 220931163
Start: 324807
End: 326222
Strand: Direct
Name: ansB [H]
Synonym: Hore_03150
Alternate gene names: 220931163
Gene position: 324807-326222 (Clockwise)
Preceding gene: 220931162
Following gene: 220931164
Centisome position: 12.6
GC content: 41.38
Gene sequence:
>1416_bases ATGTTAACCAGAAAAGAAAGGGATCCACTAGGTGAAAAGGAAGTACCCAGGGATGCATATTACGGAATTCAGACCCTGAG GGCAGCTGAAAATTTTCAAATTACCAATTTGAGGATTCACCCGGAATTAATAAAATCTCTTGCCTATGTAAAAAAGGCAG CAGCTTCTGTAAATATTGAAATAGGTATGTTGAATGAGAAGATAGGTAAGGCTATTATTCAGGCTACAGATGAAGTAATT AATGGCTCCCTTAATGAAGAGTTTATAGTTGATGCCCTCCAGGGCGGGGCCGGCACTTCTATAAATATGAATATGAATGA GGTGCTCGCCAACCGGGCTATAGAAATTTTAGGTGGAGAAAAAGGTGATTATAGTCTGGTTCACCCCAACAACCATGTAA ATATGGGGCAATCTACCAATGATGTTTATCCTACTGCAATAAGGATTACCGCAATAAAGCTTTTGAGAAGGGCACTTGAA GAATTATCATCAATGTATGGGGCCCTTACCAGAAAATCGGGGGAATTTGACCATATTATTAAAATGGGGCGGACTCAGTT ACAGGATGCAGTCCCCATCAGGCTGGGTCAGGAATTTGGGGCCTATGCCAGTGCCATTAAAAGGGATATAAGGAGGATTA AAGAAACAGTAGCTGATCTAAAGGTGGTAAATCTGGGGGCCACTGCCATCGGTACTGGTTTGAATGCCGATCATGAATAT GTTAACAATGTAACCAGACGTTTAAATGAGTTAACCGGGCTTGATTTAACCCAGGCAGATGACCTTATCGATGCTACCCA GAATGCAGATGCCCTGGTTGAAGTTTCCTCAGCTCTTAAGACCTGTGCAGTTAATCTTTCCAAGATAGCCAGTGACTTAC GTTTATTATCTTCAGGGCCCCGGGCCGGATTGAACGAAATAAACCTGCCGGCTGTACCGCCCGGGTCTTCAATTATGCCG GGGAAGGTAAACCCTGTTATTCCGGAAGTTGTAAATCAAATTGCCTATCAGATAATCGGTAATGATACCACTATAACTAT GGCTGCAGAGTCAGGTCAGCTGGAGTTAAATGTTATGATCCCGGTTTTAACATTTAACCTTTTCCAATCAATAGAGATAT TGAAAAATGGAGTAAAAACCTTTACTGAAAAAGCCATTGAGGGAATTACTGTTAATGAAGAAAGGTGTAAAGAACTTGTG GATAAGAGTGTCAGTATCATTACTGCAATTAATCCCCATGTTGGTTATGAAGTTGCATCCCGGATTGCTAAAAAGGCTTT AAAAACCGGGAAGTCGGTTAAAGAATTAATCCTGGAAGAAGGGGTGCTTAATGAAGAAGAACTTAAATTGATATTAAACC CCTATGAGATGACAGAACCCGGTATTGCCGGCAAGGAGTTACTTGAAGGGCATTAA
Upstream 100 bases:
>100_bases GGGAGCCTTCTTACAGAAGGCAAAAAAACTTGTTGGGATAAATAATGTAAAGATATGGTCATCATAAATTAATTAAAACA GGCAGGGGGAGAATATAATT
Downstream 100 bases:
>100_bases TTTACTGGTAAAAAACTGGAGGTTATAGGTTATGAATGAGGTATTTTTATGGCTTGATAAATATTTATCCCGGGAACTTG CTGTATTAATTACAGCCTGT
Product: aspartate ammonia-lyase
Products: NA
Alternate protein names: Aspartase [H]
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MLTRKERDPLGEKEVPRDAYYGIQTLRAAENFQITNLRIHPELIKSLAYVKKAAASVNIEIGMLNEKIGKAIIQATDEVI NGSLNEEFIVDALQGGAGTSINMNMNEVLANRAIEILGGEKGDYSLVHPNNHVNMGQSTNDVYPTAIRITAIKLLRRALE ELSSMYGALTRKSGEFDHIIKMGRTQLQDAVPIRLGQEFGAYASAIKRDIRRIKETVADLKVVNLGATAIGTGLNADHEY VNNVTRRLNELTGLDLTQADDLIDATQNADALVEVSSALKTCAVNLSKIASDLRLLSSGPRAGLNEINLPAVPPGSSIMP GKVNPVIPEVVNQIAYQIIGNDTTITMAAESGQLELNVMIPVLTFNLFQSIEILKNGVKTFTEKAIEGITVNEERCKELV DKSVSIITAINPHVGYEVASRIAKKALKTGKSVKELILEEGVLNEEELKLILNPYEMTEPGIAGKELLEGH
Sequences:
>Translated_471_residues MLTRKERDPLGEKEVPRDAYYGIQTLRAAENFQITNLRIHPELIKSLAYVKKAAASVNIEIGMLNEKIGKAIIQATDEVI NGSLNEEFIVDALQGGAGTSINMNMNEVLANRAIEILGGEKGDYSLVHPNNHVNMGQSTNDVYPTAIRITAIKLLRRALE ELSSMYGALTRKSGEFDHIIKMGRTQLQDAVPIRLGQEFGAYASAIKRDIRRIKETVADLKVVNLGATAIGTGLNADHEY VNNVTRRLNELTGLDLTQADDLIDATQNADALVEVSSALKTCAVNLSKIASDLRLLSSGPRAGLNEINLPAVPPGSSIMP GKVNPVIPEVVNQIAYQIIGNDTTITMAAESGQLELNVMIPVLTFNLFQSIEILKNGVKTFTEKAIEGITVNEERCKELV DKSVSIITAINPHVGYEVASRIAKKALKTGKSVKELILEEGVLNEEELKLILNPYEMTEPGIAGKELLEGH >Mature_471_residues MLTRKERDPLGEKEVPRDAYYGIQTLRAAENFQITNLRIHPELIKSLAYVKKAAASVNIEIGMLNEKIGKAIIQATDEVI NGSLNEEFIVDALQGGAGTSINMNMNEVLANRAIEILGGEKGDYSLVHPNNHVNMGQSTNDVYPTAIRITAIKLLRRALE ELSSMYGALTRKSGEFDHIIKMGRTQLQDAVPIRLGQEFGAYASAIKRDIRRIKETVADLKVVNLGATAIGTGLNADHEY VNNVTRRLNELTGLDLTQADDLIDATQNADALVEVSSALKTCAVNLSKIASDLRLLSSGPRAGLNEINLPAVPPGSSIMP GKVNPVIPEVVNQIAYQIIGNDTTITMAAESGQLELNVMIPVLTFNLFQSIEILKNGVKTFTEKAIEGITVNEERCKELV DKSVSIITAINPHVGYEVASRIAKKALKTGKSVKELILEEGVLNEEELKLILNPYEMTEPGIAGKELLEGH
Specific function: Unknown
COG id: COG1027
COG function: function code E; Aspartate ammonia-lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II fumarase/aspartase family. Aspartase subfamily [H]
Homologues:
Organism=Homo sapiens, GI19743875, Length=460, Percent_Identity=44.7826086956522, Blast_Score=385, Evalue=1e-107, Organism=Escherichia coli, GI87082375, Length=465, Percent_Identity=51.3978494623656, Blast_Score=444, Evalue=1e-126, Organism=Escherichia coli, GI1787896, Length=463, Percent_Identity=42.7645788336933, Blast_Score=380, Evalue=1e-106, Organism=Escherichia coli, GI1790398, Length=318, Percent_Identity=23.5849056603774, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17553882, Length=460, Percent_Identity=44.7826086956522, Blast_Score=395, Evalue=1e-110, Organism=Caenorhabditis elegans, GI32565146, Length=327, Percent_Identity=40.9785932721713, Blast_Score=265, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6324993, Length=460, Percent_Identity=45.2173913043478, Blast_Score=399, Evalue=1e-112, Organism=Drosophila melanogaster, GI78710009, Length=462, Percent_Identity=43.2900432900433, Blast_Score=376, Evalue=1e-104, Organism=Drosophila melanogaster, GI24640179, Length=461, Percent_Identity=42.9501084598698, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24640177, Length=461, Percent_Identity=42.9501084598698, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24662684, Length=463, Percent_Identity=41.9006479481641, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24583245, Length=463, Percent_Identity=38.6609071274298, Blast_Score=336, Evalue=2e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004708 - InterPro: IPR003031 - InterPro: IPR005677 - InterPro: IPR018951 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF10415 FumaraseC_C; PF00206 Lyase_1 [H]
EC number: =4.3.1.1 [H]
Molecular weight: Translated: 51266; Mature: 51266
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRKERDPLGEKEVPRDAYYGIQTLRAAENFQITNLRIHPELIKSLAYVKKAAASVNIE CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHEEEE IGMLNEKIGKAIIQATDEVINGSLNEEFIVDALQGGAGTSINMNMNEVLANRAIEILGGE EEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCCC KGDYSLVHPNNHVNMGQSTNDVYPTAIRITAIKLLRRALEELSSMYGALTRKSGEFDHII CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KMGRTQLQDAVPIRLGQEFGAYASAIKRDIRRIKETVADLKVVNLGATAIGTGLNADHEY HHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHCCCCCCCHHH VNNVTRRLNELTGLDLTQADDLIDATQNADALVEVSSALKTCAVNLSKIASDLRLLSSGP HHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RAGLNEINLPAVPPGSSIMPGKVNPVIPEVVNQIAYQIIGNDTTITMAAESGQLELNVMI CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEH PVLTFNLFQSIEILKNGVKTFTEKAIEGITVNEERCKELVDKSVSIITAINPHVGYEVAS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHH RIAKKALKTGKSVKELILEEGVLNEEELKLILNPYEMTEPGIAGKELLEGH HHHHHHHHCCHHHHHHHHHCCCCCHHHHEEEECCHHCCCCCCCHHHHHCCC >Mature Secondary Structure MLTRKERDPLGEKEVPRDAYYGIQTLRAAENFQITNLRIHPELIKSLAYVKKAAASVNIE CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHEEEE IGMLNEKIGKAIIQATDEVINGSLNEEFIVDALQGGAGTSINMNMNEVLANRAIEILGGE EEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCCC KGDYSLVHPNNHVNMGQSTNDVYPTAIRITAIKLLRRALEELSSMYGALTRKSGEFDHII CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KMGRTQLQDAVPIRLGQEFGAYASAIKRDIRRIKETVADLKVVNLGATAIGTGLNADHEY HHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHCCCCCCCHHH VNNVTRRLNELTGLDLTQADDLIDATQNADALVEVSSALKTCAVNLSKIASDLRLLSSGP HHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RAGLNEINLPAVPPGSSIMPGKVNPVIPEVVNQIAYQIIGNDTTITMAAESGQLELNVMI CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEH PVLTFNLFQSIEILKNGVKTFTEKAIEGITVNEERCKELVDKSVSIITAINPHVGYEVAS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHH RIAKKALKTGKSVKELILEEGVLNEEELKLILNPYEMTEPGIAGKELLEGH HHHHHHHHCCHHHHHHHHHCCCCCHHHHEEEECCHHCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1711029; 8969508; 9384377 [H]