| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is gltX [H]
Identifier: 220930943
GI number: 220930943
Start: 113314
End: 114786
Strand: Direct
Name: gltX [H]
Synonym: Hore_00950
Alternate gene names: 220930943
Gene position: 113314-114786 (Clockwise)
Preceding gene: 220930942
Following gene: 220930944
Centisome position: 4.4
GC content: 40.53
Gene sequence:
>1473_bases ATGGGTAGTATCAGGTTAAGATTTCCTCCCAGTCCAACCGGGAGAATTCATATTGGCAATATAAGAACTGCCCTTTTTAA CTGGTTATGGGCACGAAAACAGGGGGGCACCCTTGTTTTGAGAATTGAAGATACTGACCGGGAACGCTCGGCCACTGAAT TTGAAGAGATTATAATCAGGGAACTTCAGTGGCTCGGGCTAGATGTTGATGAAGGAGTTAATAAAGGTGGGGATTATGGT CCTTACCGGCAGTCTGAAAGGCTGGATATTTACAAAAAATACGCCAACAAACTCCTTGAGGAAGACAAGGCTTATTATTG TTACTGTACCCCTGAAGAATTAGAACAGATGAGGAAAGAGGCCCGCGCCCGGGGTGAAATGCCCCGCTATAACGGCCGTT GCCGTCATCTTACTGATGAGGAAAGAAAAAAACTGGAGTCTGAGGGGAGAAAACCCGTCATACGTTTTAAGTTACCTGAT GAGGAGCAGGAGATTATTGTTAATGATCAGATCAAGGGTAAGGTATCATTTCAGACTTCAGTACTCGATGATTTTATTAT ATTTAAATCTGATGGTATGCCAACCTATAATTTTGCTGTAGTTATTGATGATGCCTTAATGAAAATTACCGATGTTATCA GGGGAGAAGACCATTTATCAAATACGCCAAAACAGCTTTTATTATACGAGGCCCTCGGGTTTGAACCACCCCGTTTTGCT CATTTGCCCCTTATTTTAAACAAGGACAGGGAGAAATTGAAAAAACGGAGTAATGATGATGCTGTTTATATCGGGGAATA CAGGCGTAAGGGTTATTTACCTGAAGCCCTGTTTAATTACCTGGCTTTACTGGGCTGGGCCCCCAGGGATGGTCAGGAGC TTTTAAGCAGAGAGGAATTGATCAGACGCTTTGAATTAAAAGATGTAAATAAAAGTGGGGCTGTGTTTGATATAGATAAA TTAAACTGGCTAAATGGTAAATATATTAGAAATGCTGACATTAAGAGAATTGTAGATCTTTCTATACCCTATCTAAAAGA GGCTGGATTGATTACCGGAGAAGTTGATGCTAGTTTATACCGGTGGCTGGTTAAGGTTATAGATGTAGCCCGGACCGGGG TTGATTACCTGAAACAGATACCTGAAGAAACTTCTCTCTTTTTTAAGAAAAATGTAGAGTTTGAGGATAAATCAAAAGCT ATTGAGGAATTTAGTCAGGACGGGGTTACAGAGGTTTTCACAACACTTGTAAACAAATTAAAACAGCTTGAGACCTTGAC CCCTGAAGCCATTGATGGTATCTTTAAAGAGATGAAAAAGGAACTCCCTGTAAGTCCCCGGACTATTTATCATCCAGTGA GACTTGCCCTGACAGGTCTGAATTCAGGTCCTGAAATTAAAAATGTTATATATATTCTGGGGATCAATGAAGTTGAGAAA AGGTTAAACGAGGCATTAAATATGACAGAATAG
Upstream 100 bases:
>100_bases ATCTTAACTAATAGTAGTGTTAAATAAATAAACTTATATAGTTAAATAGATAAACTTAAAAATTTGAGTAGTGTATCCAG TATTACAAGGGGGAATATTT
Downstream 100 bases:
>100_bases CATTTAGCTAGCTTAAATATAATTCAGGCCTTCATTCCGGTACTAAAATACCGGAAGGAGGCTTTTATTATATCTCTAAG CGTTGAGACATTTCTTTAGA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 1; GluRS 1 [H]
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MGSIRLRFPPSPTGRIHIGNIRTALFNWLWARKQGGTLVLRIEDTDRERSATEFEEIIIRELQWLGLDVDEGVNKGGDYG PYRQSERLDIYKKYANKLLEEDKAYYCYCTPEELEQMRKEARARGEMPRYNGRCRHLTDEERKKLESEGRKPVIRFKLPD EEQEIIVNDQIKGKVSFQTSVLDDFIIFKSDGMPTYNFAVVIDDALMKITDVIRGEDHLSNTPKQLLLYEALGFEPPRFA HLPLILNKDREKLKKRSNDDAVYIGEYRRKGYLPEALFNYLALLGWAPRDGQELLSREELIRRFELKDVNKSGAVFDIDK LNWLNGKYIRNADIKRIVDLSIPYLKEAGLITGEVDASLYRWLVKVIDVARTGVDYLKQIPEETSLFFKKNVEFEDKSKA IEEFSQDGVTEVFTTLVNKLKQLETLTPEAIDGIFKEMKKELPVSPRTIYHPVRLALTGLNSGPEIKNVIYILGINEVEK RLNEALNMTE
Sequences:
>Translated_490_residues MGSIRLRFPPSPTGRIHIGNIRTALFNWLWARKQGGTLVLRIEDTDRERSATEFEEIIIRELQWLGLDVDEGVNKGGDYG PYRQSERLDIYKKYANKLLEEDKAYYCYCTPEELEQMRKEARARGEMPRYNGRCRHLTDEERKKLESEGRKPVIRFKLPD EEQEIIVNDQIKGKVSFQTSVLDDFIIFKSDGMPTYNFAVVIDDALMKITDVIRGEDHLSNTPKQLLLYEALGFEPPRFA HLPLILNKDREKLKKRSNDDAVYIGEYRRKGYLPEALFNYLALLGWAPRDGQELLSREELIRRFELKDVNKSGAVFDIDK LNWLNGKYIRNADIKRIVDLSIPYLKEAGLITGEVDASLYRWLVKVIDVARTGVDYLKQIPEETSLFFKKNVEFEDKSKA IEEFSQDGVTEVFTTLVNKLKQLETLTPEAIDGIFKEMKKELPVSPRTIYHPVRLALTGLNSGPEIKNVIYILGINEVEK RLNEALNMTE >Mature_489_residues GSIRLRFPPSPTGRIHIGNIRTALFNWLWARKQGGTLVLRIEDTDRERSATEFEEIIIRELQWLGLDVDEGVNKGGDYGP YRQSERLDIYKKYANKLLEEDKAYYCYCTPEELEQMRKEARARGEMPRYNGRCRHLTDEERKKLESEGRKPVIRFKLPDE EQEIIVNDQIKGKVSFQTSVLDDFIIFKSDGMPTYNFAVVIDDALMKITDVIRGEDHLSNTPKQLLLYEALGFEPPRFAH LPLILNKDREKLKKRSNDDAVYIGEYRRKGYLPEALFNYLALLGWAPRDGQELLSREELIRRFELKDVNKSGAVFDIDKL NWLNGKYIRNADIKRIVDLSIPYLKEAGLITGEVDASLYRWLVKVIDVARTGVDYLKQIPEETSLFFKKNVEFEDKSKAI EEFSQDGVTEVFTTLVNKLKQLETLTPEAIDGIFKEMKKELPVSPRTIYHPVRLALTGLNSGPEIKNVIYILGINEVEKR LNEALNMTE
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=500, Percent_Identity=33.2, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI62241042, Length=240, Percent_Identity=27.0833333333333, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI4826960, Length=302, Percent_Identity=25.8278145695364, Blast_Score=77, Evalue=4e-14, Organism=Escherichia coli, GI1788743, Length=485, Percent_Identity=38.9690721649485, Blast_Score=335, Evalue=3e-93, Organism=Escherichia coli, GI226510925, Length=266, Percent_Identity=33.4586466165414, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI1786895, Length=340, Percent_Identity=23.5294117647059, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71993394, Length=487, Percent_Identity=34.7022587268994, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI17511007, Length=241, Percent_Identity=24.0663900414938, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324540, Length=506, Percent_Identity=35.5731225296443, Blast_Score=271, Evalue=2e-73, Organism=Saccharomyces cerevisiae, GI6324742, Length=314, Percent_Identity=26.7515923566879, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6321192, Length=216, Percent_Identity=28.2407407407407, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24665321, Length=494, Percent_Identity=35.2226720647773, Blast_Score=285, Evalue=7e-77, Organism=Drosophila melanogaster, GI24649466, Length=243, Percent_Identity=28.3950617283951, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI17864488, Length=302, Percent_Identity=25.1655629139073, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 56779; Mature: 56648
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIRLRFPPSPTGRIHIGNIRTALFNWLWARKQGGTLVLRIEDTDRERSATEFEEIIIR CCCEEEECCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH ELQWLGLDVDEGVNKGGDYGPYRQSERLDIYKKYANKLLEEDKAYYCYCTPEELEQMRKE HHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH ARARGEMPRYNGRCRHLTDEERKKLESEGRKPVIRFKLPDEEQEIIVNDQIKGKVSFQTS HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCEEEEEHH VLDDFIIFKSDGMPTYNFAVVIDDALMKITDVIRGEDHLSNTPKQLLLYEALGFEPPRFA HHHCEEEEECCCCCCEEEEEEEHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCCCE HLPLILNKDREKLKKRSNDDAVYIGEYRRKGYLPEALFNYLALLGWAPRDGQELLSREEL ECCEEECCCHHHHHHCCCCCEEEEECHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH IRRFELKDVNKSGAVFDIDKLNWLNGKYIRNADIKRIVDLSIPYLKEAGLITGEVDASLY HHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCHHHHHHCCCCHHHHCCCEECCHHHHHH RWLVKVIDVARTGVDYLKQIPEETSLFFKKNVEFEDKSKAIEEFSQDGVTEVFTTLVNKL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH KQLETLTPEAIDGIFKEMKKELPVSPRTIYHPVRLALTGLNSGPEIKNVIYILGINEVEK HHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCEEEEEECHHHHH RLNEALNMTE HHHHHCCCCC >Mature Secondary Structure GSIRLRFPPSPTGRIHIGNIRTALFNWLWARKQGGTLVLRIEDTDRERSATEFEEIIIR CCEEEECCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH ELQWLGLDVDEGVNKGGDYGPYRQSERLDIYKKYANKLLEEDKAYYCYCTPEELEQMRKE HHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH ARARGEMPRYNGRCRHLTDEERKKLESEGRKPVIRFKLPDEEQEIIVNDQIKGKVSFQTS HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCEEEEEHH VLDDFIIFKSDGMPTYNFAVVIDDALMKITDVIRGEDHLSNTPKQLLLYEALGFEPPRFA HHHCEEEEECCCCCCEEEEEEEHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCCCE HLPLILNKDREKLKKRSNDDAVYIGEYRRKGYLPEALFNYLALLGWAPRDGQELLSREEL ECCEEECCCHHHHHHCCCCCEEEEECHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH IRRFELKDVNKSGAVFDIDKLNWLNGKYIRNADIKRIVDLSIPYLKEAGLITGEVDASLY HHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCHHHHHHCCCCHHHHCCCEECCHHHHHH RWLVKVIDVARTGVDYLKQIPEETSLFFKKNVEFEDKSKAIEEFSQDGVTEVFTTLVNKL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH KQLETLTPEAIDGIFKEMKKELPVSPRTIYHPVRLALTGLNSGPEIKNVIYILGINEVEK HHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCEEEEEECHHHHH RLNEALNMTE HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA