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The map label for this gene is ycjN [C]

Identifier: 220930926

GI number: 220930926

Start: 90301

End: 91536

Strand: Direct

Name: ycjN [C]

Synonym: Hore_00780

Alternate gene names: 220930926

Gene position: 90301-91536 (Clockwise)

Preceding gene: 220930925

Following gene: 220930927

Centisome position: 3.5

GC content: 42.48

Gene sequence:

>1236_bases
ATGTCAAAACGTATCATTTCTATTTTAACAGTTGGCTTGTTATTAGTGGCAATGTTAACTGGAACGGTAATGGCCGGGAA
AGTTAAATTACGCTTTTTGCAGCCCGGGGGAAATTTATATAAGCAGAGTGTTGAGTTTGCCAAGGAGTATATGAAACTAC
ACCCCAATGTAGAGATAGAAGTAATTGAGGTTGGCTGGAGTGATGCCTATTCCAAGATAATGACCATGGTGGCCGCCGGA
AATGCCCCGGATATTATGTATATTGGAACCAGGTGGATACCGGCTTTGGCCCAGATGAATGCTATTCAGCCCCTTGATAA
ATTTATCAGTGAAGAGAAGAAGGACCTGTATTTTGATTCTCTGTTAAAAGGTACCTATTACCAGGGAAAACTCTATGCTT
TACCACGCTCTTTTTCTACAAAAGCCTTAATTTACCGGACTGATTTAATCCCGGAACCACCTGAAACCTGGGATGAGCTG
GTTGAGGTTGCCAAAAGGGTTCAAAAGGAACATGAAGGTATATATGGTTTTGGAATAGCAGGAGCAAAACATGTTTCTAC
CACTACCCAGTTTTTTAATTATGTCTATCAGAATGGTGGCTCAATCTTCGATAGTGAGGGAAATATTTTGCTCGATAGTC
CCCAGTCAGTTAAGGCCCTTCAGTTTTATGTAGATCTTTATCGTAAACATAAAGTGGTTCCCAATCCTATTGAATATAAC
CGTGAAGAACTACCGAACCTCTTTAAGACCGGGAAAATAGCCATGTTTGTCTGTGGTCCCTGGGCCAAACCAATGATTGG
ACTTGATCCTGATAATGAAAAAGTACCTTATGCCAGTGCTCCCCTGCCCCGGGGAAGGTATATGGCAACTACCCTTGTTT
CTGATTCCCTGGTATTATCTTCCCAGAGTGAACATATTGATGAAGCCTGGAAGTACTTAAACTGGATAACCAGCCTGGAG
AACCAGAAAAAACATGACCTTATTAATGGAATGGCTCCGGCTATGGAAAAAGAACTTGAAGACCCGGCATTTACAGAGGA
TCCTTTTTTCAAAACATATGTTGATATGATTCCTAAAGGTCAGCCCCAGCCTCTACCTCTGGCCTGGGAACCTTTCCAGG
ATGTAATCACCGGGGCTATTCAAAAGGCTTTACTCGGAATGGCAACACCTGAAGAAGCCCTAAAGGAAGCAGTTACCAGG
ATTGAAGCTGAAAATCTGGCACCGGTTAAACACTAA

Upstream 100 bases:

>100_bases
TAAAGGGGGTGAAGAGACTTTTAAAAATATTCAAAATTAACTGTCAGCAATTAGTTTAGCAGGTGCCGGCTCTAAACAAA
AAAACGGGAGGGTTATTGAT

Downstream 100 bases:

>100_bases
TAACTTTTAGAATAAATGGTGATAGTCTCCGGAAACTCTCTATAATCATGTCTTAGATTAATATTATGTCTTTGATATAT
GTCTTTGATATGGCCGGTAG

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSKRIISILTVGLLLVAMLTGTVMAGKVKLRFLQPGGNLYKQSVEFAKEYMKLHPNVEIEVIEVGWSDAYSKIMTMVAAG
NAPDIMYIGTRWIPALAQMNAIQPLDKFISEEKKDLYFDSLLKGTYYQGKLYALPRSFSTKALIYRTDLIPEPPETWDEL
VEVAKRVQKEHEGIYGFGIAGAKHVSTTTQFFNYVYQNGGSIFDSEGNILLDSPQSVKALQFYVDLYRKHKVVPNPIEYN
REELPNLFKTGKIAMFVCGPWAKPMIGLDPDNEKVPYASAPLPRGRYMATTLVSDSLVLSSQSEHIDEAWKYLNWITSLE
NQKKHDLINGMAPAMEKELEDPAFTEDPFFKTYVDMIPKGQPQPLPLAWEPFQDVITGAIQKALLGMATPEEALKEAVTR
IEAENLAPVKH

Sequences:

>Translated_411_residues
MSKRIISILTVGLLLVAMLTGTVMAGKVKLRFLQPGGNLYKQSVEFAKEYMKLHPNVEIEVIEVGWSDAYSKIMTMVAAG
NAPDIMYIGTRWIPALAQMNAIQPLDKFISEEKKDLYFDSLLKGTYYQGKLYALPRSFSTKALIYRTDLIPEPPETWDEL
VEVAKRVQKEHEGIYGFGIAGAKHVSTTTQFFNYVYQNGGSIFDSEGNILLDSPQSVKALQFYVDLYRKHKVVPNPIEYN
REELPNLFKTGKIAMFVCGPWAKPMIGLDPDNEKVPYASAPLPRGRYMATTLVSDSLVLSSQSEHIDEAWKYLNWITSLE
NQKKHDLINGMAPAMEKELEDPAFTEDPFFKTYVDMIPKGQPQPLPLAWEPFQDVITGAIQKALLGMATPEEALKEAVTR
IEAENLAPVKH
>Mature_410_residues
SKRIISILTVGLLLVAMLTGTVMAGKVKLRFLQPGGNLYKQSVEFAKEYMKLHPNVEIEVIEVGWSDAYSKIMTMVAAGN
APDIMYIGTRWIPALAQMNAIQPLDKFISEEKKDLYFDSLLKGTYYQGKLYALPRSFSTKALIYRTDLIPEPPETWDELV
EVAKRVQKEHEGIYGFGIAGAKHVSTTTQFFNYVYQNGGSIFDSEGNILLDSPQSVKALQFYVDLYRKHKVVPNPIEYNR
EELPNLFKTGKIAMFVCGPWAKPMIGLDPDNEKVPYASAPLPRGRYMATTLVSDSLVLSSQSEHIDEAWKYLNWITSLEN
QKKHDLINGMAPAMEKELEDPAFTEDPFFKTYVDMIPKGQPQPLPLAWEPFQDVITGAIQKALLGMATPEEALKEAVTRI
EAENLAPVKH

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=331, Percent_Identity=21.7522658610272, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1790466, Length=413, Percent_Identity=24.9394673123487, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46278; Mature: 46147

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRIISILTVGLLLVAMLTGTVMAGKVKLRFLQPGGNLYKQSVEFAKEYMKLHPNVEIE
CCCHHHHHHHHHHHHHHHHHHHHEECEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE
VIEVGWSDAYSKIMTMVAAGNAPDIMYIGTRWIPALAQMNAIQPLDKFISEEKKDLYFDS
EEEECCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKGTYYQGKLYALPRSFSTKALIYRTDLIPEPPETWDELVEVAKRVQKEHEGIYGFGIA
HHCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECC
GAKHVSTTTQFFNYVYQNGGSIFDSEGNILLDSPQSVKALQFYVDLYRKHKVVPNPIEYN
CCHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
REELPNLFKTGKIAMFVCGPWAKPMIGLDPDNEKVPYASAPLPRGRYMATTLVSDSLVLS
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
SQSEHIDEAWKYLNWITSLENQKKHDLINGMAPAMEKELEDPAFTEDPFFKTYVDMIPKG
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
QPQPLPLAWEPFQDVITGAIQKALLGMATPEEALKEAVTRIEAENLAPVKH
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKRIISILTVGLLLVAMLTGTVMAGKVKLRFLQPGGNLYKQSVEFAKEYMKLHPNVEIE
CCHHHHHHHHHHHHHHHHHHHHEECEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE
VIEVGWSDAYSKIMTMVAAGNAPDIMYIGTRWIPALAQMNAIQPLDKFISEEKKDLYFDS
EEEECCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKGTYYQGKLYALPRSFSTKALIYRTDLIPEPPETWDELVEVAKRVQKEHEGIYGFGIA
HHCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECC
GAKHVSTTTQFFNYVYQNGGSIFDSEGNILLDSPQSVKALQFYVDLYRKHKVVPNPIEYN
CCHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
REELPNLFKTGKIAMFVCGPWAKPMIGLDPDNEKVPYASAPLPRGRYMATTLVSDSLVLS
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
SQSEHIDEAWKYLNWITSLENQKKHDLINGMAPAMEKELEDPAFTEDPFFKTYVDMIPKG
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
QPQPLPLAWEPFQDVITGAIQKALLGMATPEEALKEAVTRIEAENLAPVKH
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA